BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00028838
         (287 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, part...   130   2e-28
emb|CBI35029.3| unnamed protein product [Vitis vinifera]              126   4e-27
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat...   126   4e-27
gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]     122   5e-26
ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi...   118   1e-24
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat...   115   8e-24
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat...   109   4e-22
ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]    89   8e-16
ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [A...    88   1e-15
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    88   1e-15
ref|XP_007154976.1| hypothetical protein PHAVU_003G162300g [Phas...    87   2e-15
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
emb|CBI38781.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr...    87   3e-15
ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prun...    87   3e-15
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr...    86   4e-15

>ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
           gi|462412559|gb|EMJ17608.1| hypothetical protein
           PRUPE_ppa022709mg, partial [Prunus persica]
          Length = 541

 Score =  130 bits (326), Expect = 2e-28
 Identities = 64/94 (68%), Positives = 76/94 (80%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           MSL   CSNMR LK  HA+FIT+GLH N YAISKLI+F ALS+SGDL+YASLLF   Q P
Sbjct: 1   MSLAQGCSNMRKLKATHAIFITNGLHLNNYAISKLIAFCALSNSGDLSYASLLFNQIQTP 60

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLMLRDPSL 1
           NS++YNTLIRA+SRSS PH+A+ +F LML+  SL
Sbjct: 61  NSYLYNTLIRAYSRSSQPHLAVHYFLLMLKQSSL 94


>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score =  126 bits (316), Expect = 4e-27
 Identities = 62/95 (65%), Positives = 73/95 (76%)
 Frame = -3

Query: 285 CMSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQN 106
           C+SL   CSNMR  K IHA+FI +GLH N YAISKLISF ALS+SG L+YASL+F   QN
Sbjct: 7   CISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQN 66

Query: 105 PNSFIYNTLIRAHSRSSNPHVALTFFHLMLRDPSL 1
           PN F YNTLIRA+SRSS P +AL +F LML D ++
Sbjct: 67  PNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENV 101


>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g28640-like [Vitis vinifera]
          Length = 511

 Score =  126 bits (316), Expect = 4e-27
 Identities = 62/95 (65%), Positives = 73/95 (76%)
 Frame = -3

Query: 285 CMSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQN 106
           C+SL   CSNMR  K IHA+FI +GLH N YAISKLISF ALS+SG L+YASL+F   QN
Sbjct: 7   CISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQN 66

Query: 105 PNSFIYNTLIRAHSRSSNPHVALTFFHLMLRDPSL 1
           PN F YNTLIRA+SRSS P +AL +F LML D ++
Sbjct: 67  PNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENV 101


>gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]
          Length = 487

 Score =  122 bits (306), Expect = 5e-26
 Identities = 60/91 (65%), Positives = 71/91 (78%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           +SL   C+NMR LK IHA+FIT GLH N YAISKLI+F ALS SGDL +ASL+F   Q P
Sbjct: 17  ISLAQRCANMRQLKPIHALFITTGLHLNNYAISKLIAFCALSDSGDLRHASLMFNQIQTP 76

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLMLRD 10
           NSFIYNTLIRA+SRSS PH+AL +F   ++D
Sbjct: 77  NSFIYNTLIRAYSRSSQPHLALRYFQPTVKD 107


>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g28660-like [Fragaria vesca subsp. vesca]
          Length = 501

 Score =  118 bits (295), Expect = 1e-24
 Identities = 56/95 (58%), Positives = 70/95 (73%)
 Frame = -3

Query: 285 CMSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQN 106
           CMSL   C+ MR LK  HAVFITHGLH N +A+SKL++F ALS SG L YASL+F     
Sbjct: 15  CMSLAQCCTTMRSLKPTHAVFITHGLHLNNFAVSKLLAFCALSDSGSLRYASLIFHQVPA 74

Query: 105 PNSFIYNTLIRAHSRSSNPHVALTFFHLMLRDPSL 1
           PN+++YNTLIRAHS SS+PH+A+ +F LM +   L
Sbjct: 75  PNAYMYNTLIRAHSASSDPHLAMYYFQLMSKQIDL 109


>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g28640-like [Solanum tuberosum]
          Length = 512

 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/91 (57%), Positives = 70/91 (76%)
 Frame = -3

Query: 285 CMSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQN 106
           CMS+   C+N+  LK IHA++IT GLH NTYA+SKL+ F ALS++GDL+YAS +F   Q 
Sbjct: 23  CMSMAEKCTNIGQLKAIHAIYITLGLHRNTYAVSKLLDFCALSNTGDLSYASRIFAQVQT 82

Query: 105 PNSFIYNTLIRAHSRSSNPHVALTFFHLMLR 13
           PN+F+YN LIRA+S SS P  +L +F+LML+
Sbjct: 83  PNTFLYNALIRAYSSSSQPQFSLNYFNLMLQ 113


>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g28640-like [Solanum lycopersicum]
          Length = 487

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = -3

Query: 264 CSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPNSFIYN 85
           C+NMR LK IHA++IT GL  NTYA+SKL+ F ALS+SGDL+YAS +F   Q PN+F+YN
Sbjct: 5   CNNMRQLKAIHAIYITLGLQRNTYAVSKLLDFCALSNSGDLSYASRIFAQVQTPNAFLYN 64

Query: 84  TLIRAHSRSSNPHVALTFFHLMLR 13
            LIRA+S S  P V+L +F+LM++
Sbjct: 65  ALIRAYSSSPQPQVSLNYFNLMVQ 88


>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = -3

Query: 276 LINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPNS 97
           L + C++M  LK+IHA  I      + YA S+L+SF ALS SGDL+YA  LF +TQ PNS
Sbjct: 32  LADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNS 91

Query: 96  FIYNTLIRAHSRSSNPHVALTFFHLMLR 13
           F++NTLIRAH+ S NP  AL  +  M R
Sbjct: 92  FMWNTLIRAHASSLNPSEALLLYVDMRR 119


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = -3

Query: 276 LINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPNS 97
           L + C++M  LK+IHA  I      + YA S+L+SF ALS SGDL+YA  LF +TQ PNS
Sbjct: 34  LADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNS 93

Query: 96  FIYNTLIRAHSRSSNPHVALTFFHLMLR 13
           F++NTLIRAH+ S NP  AL  +  M R
Sbjct: 94  FMWNTLIRAHASSLNPSEALLLYVDMRR 121


>ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [Amborella trichopoda]
           gi|548844970|gb|ERN04489.1| hypothetical protein
           AMTR_s00081p00056740 [Amborella trichopoda]
          Length = 406

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = -3

Query: 276 LINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPNS 97
           L+  C++M+ LK+IHA F   GLH++ +A+SK+I F ++S  GDL++A LLF     PN 
Sbjct: 39  LLQSCTSMKQLKQIHAQFFKTGLHNDQFALSKIIEFCSISPFGDLDFAHLLFGTISEPNQ 98

Query: 96  FIYNTLIRAHSRSSNPHVALTFFHLML 16
           FI+NTLIR HS SS P  +L+ +  ML
Sbjct: 99  FIWNTLIRGHSLSSTPMDSLSLYIAML 125


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/90 (50%), Positives = 63/90 (70%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           M +++ C++M  LK+IHA  I     S+ +A S+L+SF ALS+S D+NYA  LFK  Q+P
Sbjct: 53  MDMVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLFKSIQDP 112

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLMLR 13
           N F++NT+IRA + SSNP  AL F+  MLR
Sbjct: 113 NIFMWNTIIRALANSSNPDQALFFYIQMLR 142


>ref|XP_007154976.1| hypothetical protein PHAVU_003G162300g [Phaseolus vulgaris]
           gi|561028330|gb|ESW26970.1| hypothetical protein
           PHAVU_003G162300g [Phaseolus vulgaris]
          Length = 733

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/89 (49%), Positives = 63/89 (70%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           ++L+++C N+  LK+IH++ I  GLH+  +A SKLI F ALS S DL+YA  LF   Q+P
Sbjct: 31  LTLLSNCPNIATLKQIHSLIIKTGLHNTLFAQSKLIEFCALSPSQDLSYALSLFHSIQHP 90

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLML 16
           N FI NTLIRAHS + +P+ +L  ++ ML
Sbjct: 91  NIFICNTLIRAHSLTHSPNSSLELYNQML 119


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/87 (49%), Positives = 62/87 (71%)
 Frame = -3

Query: 276 LINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPNS 97
           L N C+NM+ L++IHA  I  GL ++T A S++++F A S +GD+NYA ++F+H  NPN 
Sbjct: 27  LENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGDINYAYMVFRHIHNPNL 85

Query: 96  FIYNTLIRAHSRSSNPHVALTFFHLML 16
           FI+NT+IR  S SSNP  A++ F  ML
Sbjct: 86  FIWNTIIRGFSNSSNPEAAISLFIDML 112


>emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/88 (50%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -3

Query: 276 LINHCSNMRHLKRIHAVFI-THGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPN 100
           L  HC+++   K+ HA+ + TH LH+  ++ SKLISF ALSHSGDLNYA  LF   QNP+
Sbjct: 17  LKTHCTSISKTKQAHALLLRTHLLHNPLFS-SKLISFLALSHSGDLNYARKLFTQMQNPD 75

Query: 99  SFIYNTLIRAHSRSSNPHVALTFFHLML 16
            FI NT+IR ++RS NP+ A++ ++ M+
Sbjct: 76  PFICNTMIRGYARSQNPYEAVSLYYFMV 103


>ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/88 (50%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -3

Query: 276 LINHCSNMRHLKRIHAVFI-THGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNPN 100
           L  HC+++   K+ HA+ + TH LH+  ++ SKLISF ALSHSGDLNYA  LF   QNP+
Sbjct: 17  LKTHCTSISKTKQAHALLLRTHLLHNPLFS-SKLISFLALSHSGDLNYARKLFTQMQNPD 75

Query: 99  SFIYNTLIRAHSRSSNPHVALTFFHLML 16
            FI NT+IR ++RS NP+ A++ ++ M+
Sbjct: 76  PFICNTMIRGYARSQNPYEAVSLYYFMV 103


>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 736

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/89 (43%), Positives = 64/89 (71%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           ++L++ C+NM+++K++H+  I  GLH+  +A+SKLI   A+S  GDL+YA L+F+  + P
Sbjct: 34  LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLML 16
           N  I+N +IR HS SS+P VA+ F+  M+
Sbjct: 94  NQVIWNNIIRGHSLSSSPVVAIKFYVRMI 122


>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
           gi|557554208|gb|ESR64222.1| hypothetical protein
           CICLE_v10010823mg [Citrus clementina]
          Length = 736

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/89 (43%), Positives = 64/89 (71%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           ++L++ C+NM+++K++H+  I  GLH+  +A+SKLI   A+S  GDL+YA L+F+  + P
Sbjct: 34  LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLML 16
           N  I+N +IR HS SS+P VA+ F+  M+
Sbjct: 94  NQVIWNNIIRGHSLSSSPVVAIKFYVRMI 122


>ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
           gi|462399488|gb|EMJ05156.1| hypothetical protein
           PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 41/89 (46%), Positives = 63/89 (70%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           ++L++ C +M++LK++HA  I  GLH+  +A+SKL+ F A+S  GDL+YA L+F+  +NP
Sbjct: 37  LTLLSKCKSMQNLKQVHAHIIKTGLHNTHFALSKLVEFCAISPFGDLSYALLVFQSIENP 96

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLML 16
           N  I+NT+IR  S SS    A+ F+ LML
Sbjct: 97  NQIIWNTIIRGFSLSSKSIQAVEFYVLML 125


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/89 (47%), Positives = 61/89 (68%)
 Frame = -3

Query: 282 MSLINHCSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLNYASLLFKHTQNP 103
           + L++ C ++R  K+IHA  I  GLH+  +A+SKLI FSA+S SGD++YA  LF   + P
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 102 NSFIYNTLIRAHSRSSNPHVALTFFHLML 16
           N FI+N++IR  S S +P +AL FF  M+
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMI 121


>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g28640 gi|9294278|dbj|BAB02180.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643948|gb|AEE77469.1| putative pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
 Frame = -3

Query: 264 CSNMRHLKRIHAVFITHGLHSNTYAISKLISFSALSHSGDLN----YASLLFKHTQNPNS 97
           C+ ++ +K  H++FI HGLH NTYAISKL++  A  H  +LN    YAS +F   + PNS
Sbjct: 21  CNTVKQIKSTHSLFIIHGLHRNTYAISKLLT--AFLHLPNLNKHFHYASSIFDSIEIPNS 78

Query: 96  FIYNTLIRAHSRSSNPHVALTFFHLMLRD 10
           F+Y+T+IR  SRSS PH+ L +F LM+++
Sbjct: 79  FVYDTMIRICSRSSQPHLGLRYFLLMVKE 107