BLASTX nr result
ID: Cocculus23_contig00028771
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00028771
(387 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003604367.1| Signal recognition particle 54 kDa protein [... 119 1e-27
ref|XP_004506954.1| PREDICTED: signal recognition particle 54 kD... 126 3e-27
ref|XP_006307324.1| hypothetical protein CARUB_v10008947mg [Caps... 126 3e-27
ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kD... 125 5e-27
ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kD... 125 5e-27
ref|NP_564535.1| signal recognition particle subunit SRP54 [Ara... 125 6e-27
gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa prot... 125 6e-27
ref|XP_006373975.1| hypothetical protein POPTR_0016s12030g [Popu... 125 8e-27
ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kD... 124 1e-26
gb|ABK95819.1| unknown [Populus trichocarpa] 124 1e-26
ref|XP_006465307.1| PREDICTED: signal recognition particle 54 kD... 124 1e-26
ref|XP_006427317.1| hypothetical protein CICLE_v10025458mg [Citr... 124 1e-26
ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kD... 124 1e-26
ref|XP_004486653.1| PREDICTED: signal recognition particle 54 kD... 123 2e-26
ref|XP_004164333.1| PREDICTED: signal recognition particle 54 kD... 123 2e-26
ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kD... 123 2e-26
ref|XP_007135764.1| hypothetical protein PHAVU_010G156800g [Phas... 123 3e-26
ref|XP_002299799.2| Signal recognition particle 54 kDa protein 1... 123 3e-26
gb|AAA66200.1| signal recognition particle 54 kDa subunit [Arabi... 123 3e-26
ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kD... 123 3e-26
>ref|XP_003604367.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355505422|gb|AES86564.1| Signal recognition particle
54 kDa protein [Medicago truncatula]
Length = 496
Score = 119 bits (299), Expect(2) = 1e-27
Identities = 60/96 (62%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG + +SQAKIKR+MTMMD MT+EELDSSN +LMNESRMM+IA GSG QVR++M+M++E
Sbjct: 362 PKGKDQDSQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRQVREVMEMMEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ M++++R MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGDMNSMTRNMNATHMSK 457
Score = 29.3 bits (64), Expect(2) = 1e-27
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 2 LGPNVQVFSILPGFWEELRP*G 67
+GP +VFS+LPGF EL P G
Sbjct: 343 MGPMSEVFSMLPGFSNELLPKG 364
>ref|XP_004506954.1| PREDICTED: signal recognition particle 54 kDa protein 2-like [Cicer
arietinum]
Length = 496
Score = 126 bits (317), Expect = 3e-27
Identities = 66/96 (68%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMNESRMM+IA GSG QVR++M+M++E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRQVREVMEMMEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSK 457
>ref|XP_006307324.1| hypothetical protein CARUB_v10008947mg [Capsella rubella]
gi|482576035|gb|EOA40222.1| hypothetical protein
CARUB_v10008947mg [Capsella rubella]
Length = 495
Score = 126 bits (317), Expect = 3e-27
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKGHE ESQAKIKR+MTMMD MT+EELDSSN ++ NESRMM+IA GSG QVR++M+ML+E
Sbjct: 362 PKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSK 457
>ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 499
Score = 125 bits (315), Expect = 5e-27
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMNESRMM+IA G+G Q+R++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSK 457
>ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 500
Score = 125 bits (315), Expect = 5e-27
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMNESRMM+IA G+G Q+R++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSK 457
>ref|NP_564535.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|21542461|sp|P49967.2|SR543_ARATH RecName: Full=Signal
recognition particle 54 kDa protein 3; Short=SRP54
gi|17386102|gb|AAL38597.1|AF446864_1 At1g48900/F27K7_8
[Arabidopsis thaliana] gi|15450461|gb|AAK96524.1|
At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15810010|gb|AAL06932.1| At1g48900/F27K7_8
[Arabidopsis thaliana] gi|332194242|gb|AEE32363.1|
signal recognition particle subunit SRP54 [Arabidopsis
thaliana]
Length = 495
Score = 125 bits (314), Expect = 6e-27
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKGHE ESQAKIKR+MTMMD MT++ELDSSN ++ NESRMM+IA GSG QVR++M+ML+E
Sbjct: 362 PKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSK 457
>gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
Length = 522
Score = 125 bits (314), Expect = 6e-27
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKGHE ESQAKIKR+MTMMD MT++ELDSSN ++ NESRMM+IA GSG QVR++M+ML+E
Sbjct: 389 PKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEE 448
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK MSALSR MN HM +
Sbjct: 449 YKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSK 484
>ref|XP_006373975.1| hypothetical protein POPTR_0016s12030g [Populus trichocarpa]
gi|550321315|gb|ERP51772.1| hypothetical protein
POPTR_0016s12030g [Populus trichocarpa]
Length = 495
Score = 125 bits (313), Expect = 8e-27
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMNESR+M+IA GSG VRD+M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRIMRIARGSGRSVRDVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Glycine
max]
Length = 495
Score = 124 bits (312), Expect = 1e-26
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMNESRMM+IA GSG VR++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRPVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>gb|ABK95819.1| unknown [Populus trichocarpa]
Length = 495
Score = 124 bits (312), Expect = 1e-26
Identities = 64/96 (66%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKGHE ESQAKIKR+MTMMD MT+EELDSSN +L+N+SRMM+IA G+G +RD+M+ML+E
Sbjct: 362 PKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAKV MKGL +PK+ MS+LSR MN HM +
Sbjct: 422 YKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSK 457
>ref|XP_006465307.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Citrus sinensis]
Length = 494
Score = 124 bits (311), Expect = 1e-26
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMN+SR+M+IA GSG QVR++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>ref|XP_006427317.1| hypothetical protein CICLE_v10025458mg [Citrus clementina]
gi|557529307|gb|ESR40557.1| hypothetical protein
CICLE_v10025458mg [Citrus clementina]
Length = 494
Score = 124 bits (311), Expect = 1e-26
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMN+SR+M+IA GSG QVR++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
vinifera]
Length = 495
Score = 124 bits (311), Expect = 1e-26
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELD+SN +LMNESR+M+IA GSG QVR++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSGRQVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>ref|XP_004486653.1| PREDICTED: signal recognition particle 54 kDa protein 2-like [Cicer
arietinum]
Length = 495
Score = 123 bits (309), Expect = 2e-26
Identities = 64/94 (68%), Positives = 77/94 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAK+KR+MTMMD MT+EELDSSN +LMNESRMM+IA GSG QVR+++ M++E
Sbjct: 362 PKGREKESQAKVKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRQVREVLDMMEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HM 341
YK LAK+ MKGL +PK+ MSALSR MN HM
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHM 455
>ref|XP_004164333.1| PREDICTED: signal recognition particle 54 kDa protein 3-like
[Cucumis sativus]
Length = 144
Score = 123 bits (309), Expect = 2e-26
Identities = 63/96 (65%), Positives = 80/96 (83%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAK+KR+MTMMD MTDEELDS+N +L+NESRMM+IA GSG++V+++M+M++E
Sbjct: 11 PKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMMEE 70
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAKV MKGL +PK+ MSALSR MN HM +
Sbjct: 71 YKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSK 106
>ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 495
Score = 123 bits (309), Expect = 2e-26
Identities = 63/96 (65%), Positives = 80/96 (83%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAK+KR+MTMMD MTDEELDS+N +L+NESRMM+IA GSG++V+++M+M++E
Sbjct: 362 PKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMMEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAKV MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>ref|XP_007135764.1| hypothetical protein PHAVU_010G156800g [Phaseolus vulgaris]
gi|561008809|gb|ESW07758.1| hypothetical protein
PHAVU_010G156800g [Phaseolus vulgaris]
Length = 495
Score = 123 bits (308), Expect = 3e-26
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +LMNESR+M+IA GSG VR++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRVMRIARGSGRPVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457
>ref|XP_002299799.2| Signal recognition particle 54 kDa protein 1 [Populus trichocarpa]
gi|550348208|gb|EEE84604.2| Signal recognition particle
54 kDa protein 1 [Populus trichocarpa]
Length = 495
Score = 123 bits (308), Expect = 3e-26
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKGHE ESQAKIKR+MTMMD MT+EELDSSN +L+N+SRMM+IA G+G +RD+M++L+E
Sbjct: 362 PKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEILEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAKV MKGL +PK+ MS+LSR MN HM +
Sbjct: 422 YKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSK 457
>gb|AAA66200.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 123 bits (308), Expect = 3e-26
Identities = 64/96 (66%), Positives = 77/96 (80%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKGHE ESQAKIKR+MTMMD MT++ELDSS ++ NESRMM+IA GSG QVR++M+ML+E
Sbjct: 362 PKGHEKESQAKIKRYMTMMDSMTNDELDSSGPKVFNESRMMRIARGSGRQVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSK 457
>ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 1 [Glycine max]
Length = 495
Score = 123 bits (308), Expect = 3e-26
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = +3
Query: 60 PKGHEIESQAKIKRFMTMMDPMTDEELDSSNLELMNESRMMQIA*GSGYQVRDMMKMLKE 239
PKG E ESQAKIKR+MTMMD MT+EELDSSN +L+NESRMM+IA GSG VR++M+ML+E
Sbjct: 362 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRMMRIARGSGRPVREVMEMLEE 421
Query: 240 YKHLAKV**TMKGLGMPKRRGMSALSRYMNT*HMQR 347
YK LAK+ MKGL +PK+ MSALSR MN HM +
Sbjct: 422 YKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK 457