BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00028767
         (1083 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   108   4e-21
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-21
dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]    106   2e-20
ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [S...   105   3e-20
emb|CBI22269.3| unnamed protein product [Vitis vinifera]              105   4e-20
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   105   4e-20
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-20
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   104   6e-20
ref|XP_006664140.1| PREDICTED: pentatricopeptide repeat-containi...   104   7e-20
ref|XP_004962988.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-19
gb|EMT28707.1| Pentatricopeptide repeat-containing protein [Aegi...   102   3e-19
ref|XP_007139556.1| hypothetical protein PHAVU_008G039700g [Phas...   102   4e-19
tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea m...   102   4e-19
ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group] g...   102   4e-19
gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japo...   102   4e-19
ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea ma...   102   4e-19
gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indi...   102   4e-19
gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sat...   102   4e-19
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   101   6e-19
ref|XP_007032637.1| Tetratricopeptide repeat (TPR)-like superfam...   101   6e-19

>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
            gi|550340897|gb|EEE85888.2| hypothetical protein
            POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  108 bits (270), Expect = 4e-21
 Identities = 51/87 (58%), Positives = 67/87 (77%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PS+ GNY++L NI+A+ G W   A VRL+MKN  I K +GASSIE+D+EVHEFTV D+SH
Sbjct: 517  PSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDKSH 576

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S +IY M++RLG  LK+V  VPK +
Sbjct: 577  PKSDKIYQMINRLGLDLKRVHVVPKVY 603


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Glycine max]
          Length = 604

 Score =  108 bits (269), Expect = 5e-21
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PS+ GNY++L NIYA  G W + A VRL+MKN    K +GASSIE++ EVHEFTV D+SH
Sbjct: 517  PSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQSH 576

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S  IY M+DRL + L+QVGYVP  H
Sbjct: 577  PKSDDIYQMIDRLVQDLRQVGYVPMIH 603


>dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 639

 Score =  106 bits (264), Expect = 2e-20
 Identities = 50/87 (57%), Positives = 58/87 (66%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S IELD   HEFTV DR H
Sbjct: 548  PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDRKH 607

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
              S +I  M+DRL  H+K VG VP AH
Sbjct: 608  SDSDQISEMVDRLSSHVKDVGCVPTAH 634


>ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
            gi|241940990|gb|EES14135.1| hypothetical protein
            SORBIDRAFT_07g025280 [Sorghum bicolor]
          Length = 690

 Score =  105 bits (263), Expect = 3e-20
 Identities = 50/87 (57%), Positives = 59/87 (67%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S IELD   HEFTV DR H
Sbjct: 599  PSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKH 658

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S +I  M+DRL  H+K VG VP  H
Sbjct: 659  PESDQISDMIDRLSSHVKCVGCVPVGH 685


>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  105 bits (261), Expect = 4e-20
 Identities = 47/79 (59%), Positives = 64/79 (81%)
 Frame = -3

Query: 1078 SNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSHP 899
            S++GN ++L NIYAA G WD+FA +RLRMK+ +I K +G SSIE+D+EVHEFTV DRSHP
Sbjct: 427  SDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHP 486

Query: 898  QSSRIYSMMDRLGKHLKQV 842
            +S RIY  +D LG+H+ ++
Sbjct: 487  KSDRIYKTIDGLGQHINKL 505


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  105 bits (261), Expect = 4e-20
 Identities = 47/85 (55%), Positives = 67/85 (78%)
 Frame = -3

Query: 1078 SNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSHP 899
            S+ GNY++L NI+AA G W+  A +RL+MK+  + K +GASSIELD+EVHEFTV D+SHP
Sbjct: 518  SDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHP 577

Query: 898  QSSRIYSMMDRLGKHLKQVGYVPKA 824
            ++ +IY ++ +LG+ LKQV Y P+A
Sbjct: 578  ETDKIYQILVKLGQDLKQVAYAPEA 602


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
            [Vitis vinifera]
          Length = 594

 Score =  105 bits (261), Expect = 4e-20
 Identities = 47/79 (59%), Positives = 64/79 (81%)
 Frame = -3

Query: 1078 SNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSHP 899
            S++GN ++L NIYAA G WD+FA +RLRMK+ +I K +G SSIE+D+EVHEFTV DRSHP
Sbjct: 512  SDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHP 571

Query: 898  QSSRIYSMMDRLGKHLKQV 842
            +S RIY  +D LG+H+ ++
Sbjct: 572  KSDRIYKTIDGLGQHINKL 590


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Glycine max]
          Length = 604

 Score =  104 bits (260), Expect = 6e-20
 Identities = 50/87 (57%), Positives = 64/87 (73%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            P++ GNY++L NIYA  G W + A VRL+M N    K +GASSIE++ EVHEFTV D+SH
Sbjct: 517  PTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSH 576

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S  IY M+DRL + L+QVGYVP  H
Sbjct: 577  PKSDDIYKMIDRLVQDLRQVGYVPMIH 603


>ref|XP_006664140.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Oryza brachyantha]
          Length = 491

 Score =  104 bits (259), Expect = 7e-20
 Identities = 47/87 (54%), Positives = 58/87 (66%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGN+A+L NIYA  G W D A+ R++MK     K AG+S +ELD   HEFTV DR H
Sbjct: 400  PSNAGNFAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELDEAFHEFTVGDRKH 459

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P S +I  M+DRL  H+K+ G VP  H
Sbjct: 460  PDSDQISEMVDRLSSHVKRAGCVPAGH 486


>ref|XP_004962988.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Setaria italica]
          Length = 493

 Score =  103 bits (257), Expect = 1e-19
 Identities = 47/87 (54%), Positives = 58/87 (66%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S IELD   HEFTV DR H
Sbjct: 402  PSNAGNYAVLSNIYAEAGQWSDMAKARVQMKETGSQKTAGSSWIELDEAFHEFTVGDRKH 461

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S +I  M+ RL  H+K+ G +P  H
Sbjct: 462  PESEQISEMVGRLSSHVKRAGCIPAGH 488


>gb|EMT28707.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 571

 Score =  102 bits (254), Expect = 3e-19
 Identities = 48/87 (55%), Positives = 58/87 (66%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S IELD   HEFTV DR H
Sbjct: 480  PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDRKH 539

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
              S +I  M+DRL  H+K VG +P A+
Sbjct: 540  SDSDQISEMVDRLSSHVKDVGCLPTAN 566


>ref|XP_007139556.1| hypothetical protein PHAVU_008G039700g [Phaseolus vulgaris]
            gi|561012689|gb|ESW11550.1| hypothetical protein
            PHAVU_008G039700g [Phaseolus vulgaris]
          Length = 604

 Score =  102 bits (253), Expect = 4e-19
 Identities = 48/84 (57%), Positives = 64/84 (76%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PS+AGNY++L NIYA  G W + A +RL+MKN    K +GASSIE++ EVHEFTV D+SH
Sbjct: 517  PSDAGNYSLLSNIYAQAGDWMNVANIRLQMKNTVRQKPSGASSIEVEEEVHEFTVFDQSH 576

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVP 830
            P+S  IY M+DRL + L++V +VP
Sbjct: 577  PKSDDIYRMIDRLVQDLQEVEFVP 600


>tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
          Length = 687

 Score =  102 bits (253), Expect = 4e-19
 Identities = 48/87 (55%), Positives = 59/87 (67%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PS+AGNYA+L NIYA  G W D A+ R++MK     K AG+S IEL+   HEFTV DR H
Sbjct: 596  PSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKH 655

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S +I  M+DRL  H+K VG VP  H
Sbjct: 656  PESDQISDMIDRLSSHVKFVGCVPVGH 682


>ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
            gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza
            sativa Japonica Group]
          Length = 614

 Score =  102 bits (253), Expect = 4e-19
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S +EL+   HEFTV DR H
Sbjct: 523  PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKH 582

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
              S +I  M+DRL  H+K VG VP  H
Sbjct: 583  QDSDQISEMVDRLSSHVKHVGCVPAGH 609


>gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
          Length = 921

 Score =  102 bits (253), Expect = 4e-19
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S +EL+   HEFTV DR H
Sbjct: 830  PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKH 889

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
              S +I  M+DRL  H+K VG VP  H
Sbjct: 890  QDSDQISEMVDRLSSHVKHVGCVPAGH 916


>ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
            gi|194696634|gb|ACF82401.1| unknown [Zea mays]
          Length = 615

 Score =  102 bits (253), Expect = 4e-19
 Identities = 48/87 (55%), Positives = 59/87 (67%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PS+AGNYA+L NIYA  G W D A+ R++MK     K AG+S IEL+   HEFTV DR H
Sbjct: 524  PSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKH 583

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
            P+S +I  M+DRL  H+K VG VP  H
Sbjct: 584  PESDQISDMIDRLSSHVKFVGCVPVGH 610


>gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
          Length = 914

 Score =  102 bits (253), Expect = 4e-19
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S +EL+   HEFTV DR H
Sbjct: 823  PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKH 882

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
              S +I  M+DRL  H+K VG VP  H
Sbjct: 883  QDSDQISEMVDRLSSHVKHVGCVPAGH 909


>gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 491

 Score =  102 bits (253), Expect = 4e-19
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PSNAGNYA+L NIYA  G W D A+ R++MK     K AG+S +EL+   HEFTV DR H
Sbjct: 400  PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKH 459

Query: 901  PQSSRIYSMMDRLGKHLKQVGYVPKAH 821
              S +I  M+DRL  H+K VG VP  H
Sbjct: 460  QDSDQISEMVDRLSSHVKHVGCVPAGH 486


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Citrus sinensis]
          Length = 614

 Score =  101 bits (251), Expect = 6e-19
 Identities = 47/84 (55%), Positives = 62/84 (73%)
 Frame = -3

Query: 1078 SNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSHP 899
            S+ GNY +L NI+AATG W+  A VRL+MK     K +GASS+E+DNEVHEF+V D+ HP
Sbjct: 521  SDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHP 580

Query: 898  QSSRIYSMMDRLGKHLKQVGYVPK 827
            +S +IY M++ LGK LK VG+  K
Sbjct: 581  KSEQIYQMINTLGKDLKPVGHAAK 604


>ref|XP_007032637.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508711666|gb|EOY03563.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 672

 Score =  101 bits (251), Expect = 6e-19
 Identities = 46/80 (57%), Positives = 64/80 (80%)
 Frame = -3

Query: 1081 PSNAGNYAILCNIYAATGHWDDFARVRLRMKNATIPKQAGASSIELDNEVHEFTVADRSH 902
            PS+ GNY++L NI+AA+G WD+ A +RLRMK+  + K +G+SSIE+DNEVH+FTV D+SH
Sbjct: 576  PSDPGNYSMLANIFAASGDWDNVASLRLRMKSIGVQKPSGSSSIEIDNEVHDFTVFDKSH 635

Query: 901  PQSSRIYSMMDRLGKHLKQV 842
            P+   IY M++RL + LKQV
Sbjct: 636  PKFDGIYQMIERLREDLKQV 655