BLASTX nr result
ID: Cocculus23_contig00028532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00028532
(271 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 99 6e-19
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 99 6e-19
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 96 4e-18
ref|XP_004305310.1| PREDICTED: small subunit processome componen... 90 3e-16
ref|XP_003601650.1| Small subunit processome component-like prot... 86 7e-15
ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prun... 85 1e-14
ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prun... 83 3e-14
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 82 6e-14
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 81 1e-13
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 79 7e-13
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 76 6e-12
ref|XP_007163660.1| hypothetical protein PHAVU_001G253000g, part... 75 7e-12
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 73 5e-11
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 72 6e-11
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 69 5e-10
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 69 5e-10
gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis] 69 9e-10
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 99.0 bits (245), Expect = 6e-19
Identities = 49/87 (56%), Positives = 61/87 (70%)
Frame = +3
Query: 9 KFFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSE 188
+FF TI E+ L++LSH VYDMSS +LILR SA L +SFV FS IL +V+SG EM E
Sbjct: 993 EFFYTIPENQALVILSHCVYDMSSNELILRHSAYRLLVSFVEFSIQILRLEVKSGHEMPE 1052
Query: 189 CEVAVDTNPCWTKACVQRIIQKFFLKH 269
V + CWT+AC+QR+I KF LKH
Sbjct: 1053 AMVTSIADGCWTEACIQRMINKFLLKH 1079
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 99.0 bits (245), Expect = 6e-19
Identities = 49/87 (56%), Positives = 61/87 (70%)
Frame = +3
Query: 9 KFFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSE 188
+FF TI E+ L++LSH VYDMSS +LILR SA L +SFV FS IL +V+SG EM E
Sbjct: 1435 EFFYTIPENQALVILSHCVYDMSSNELILRHSAYRLLVSFVEFSIQILRLEVKSGHEMPE 1494
Query: 189 CEVAVDTNPCWTKACVQRIIQKFFLKH 269
V + CWT+AC+QR+I KF LKH
Sbjct: 1495 AMVTSIADGCWTEACIQRMINKFLLKH 1521
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/87 (55%), Positives = 60/87 (68%)
Frame = +3
Query: 9 KFFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSE 188
+FF TI E+ L++LSH VYDMSS +LILR SA L +SFV FS IL +V+S EM E
Sbjct: 1186 EFFYTIPENQALVILSHCVYDMSSNELILRHSAYRLLVSFVEFSIQILRLEVKSDHEMPE 1245
Query: 189 CEVAVDTNPCWTKACVQRIIQKFFLKH 269
V + CWT+AC+QR+I KF LKH
Sbjct: 1246 AMVTSIADGCWTEACIQRMINKFLLKH 1272
>ref|XP_004305310.1| PREDICTED: small subunit processome component 20 homolog [Fragaria
vesca subsp. vesca]
Length = 2681
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSECE 194
F+TI EDH L++LSH VYDMSS + LR A ISFV FS+LIL V + EM +
Sbjct: 1467 FNTIREDHALVILSHCVYDMSSNESTLRHRAYDALISFVQFSALILGKVVNNDSEMPDKM 1526
Query: 195 VAVDTNPCWTKACVQRIIQKFFLKH 269
+A + + CWTK C+QRI KFFLKH
Sbjct: 1527 LASEDH-CWTKGCIQRITSKFFLKH 1550
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/86 (48%), Positives = 56/86 (65%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF + +H L++LSH V DMSSE+ SA +SFV FS+LIL ++ G E
Sbjct: 1470 FFRNVQVEHALLILSHCVLDMSSEETTFVSSAQSSLLSFVDFSALIL---LQEGSNEQEL 1526
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
V +T+ CWTK+C+QRII+KFFLKH
Sbjct: 1527 SVIQNTDGCWTKSCIQRIIKKFFLKH 1552
>ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
gi|462412299|gb|EMJ17348.1| hypothetical protein
PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC- 191
F TI EDH L++LSH VYDMSSE+LILR SA SFV F++LIL V + EM +
Sbjct: 1420 FYTIREDHALVILSHCVYDMSSEELILRHSAYKSLRSFVEFAALILGQVVSNHCEMPDMP 1479
Query: 192 -EVAVDTNPCWTKACVQRIIQKFFLKH 269
++ N WT+AC+QRI KF L H
Sbjct: 1480 DKMLASDNCYWTRACIQRITSKFLLNH 1506
>ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
gi|462411042|gb|EMJ16091.1| hypothetical protein
PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC- 191
F TI EDH L++LSH VYDMSSE+LILR SA SFV F++LIL V + EM +
Sbjct: 1428 FYTIREDHALVILSHCVYDMSSEELILRHSAYKSLRSFVEFAALILGQVVNNHCEMPDMP 1487
Query: 192 EVAVDTNPC-WTKACVQRIIQKFFLKH 269
+ + ++ C WT+AC+QRI KF L H
Sbjct: 1488 DKMLASDDCYWTRACIQRITSKFLLNH 1514
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/86 (48%), Positives = 57/86 (66%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF + +H L++LSH V+DMSSE+ SA +SFV FS+LIL + S QE+S
Sbjct: 1458 FFRNVQVEHALLILSHCVHDMSSEETTFVCSAQSSLLSFVDFSALILCQEGNSEQELS-- 1515
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
V +T+ CWTK+C+QRI +KF LKH
Sbjct: 1516 -VMQNTDGCWTKSCIQRITKKFLLKH 1540
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF + +HTL++LS VYDMSSE+LILR A L ++F+ FS+ IL +V E +E
Sbjct: 1465 FFCAMPVEHTLLILSQCVYDMSSEELILRHHAYRLLLTFLEFSAKILGQEVTDHHETAE- 1523
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
E+ +D WT+AC++RII KF LK+
Sbjct: 1524 EMMIDDEGRWTRACMRRIINKFLLKN 1549
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF T+ E+H LI+LSH+++DMSS DLILRQSA L +SFV FSS I+D +++S QE S
Sbjct: 1471 FFHTVPEEHALIILSHAIHDMSSGDLILRQSAYKLLLSFVEFSSQIVDRELKSEQESS-- 1528
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
A V+ I+ FFLKH
Sbjct: 1529 -----------GAWVRHILSNFFLKH 1543
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 75.9 bits (185), Expect = 6e-12
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF ++ +H L++LSH V+DMSSE+ SA +SFV FS+ IL + S +++S
Sbjct: 1463 FFRSVQVEHALLILSHCVHDMSSEETTFMFSAYSSLLSFVDFSAHILCQEGNSEEQLS-- 1520
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
V +T+ CWTK+C+QR +KF LKH
Sbjct: 1521 -VMRNTDSCWTKSCIQRTAKKFLLKH 1545
>ref|XP_007163660.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus vulgaris]
gi|561037124|gb|ESW35654.1| hypothetical protein
PHAVU_001G253000g, partial [Phaseolus vulgaris]
Length = 2722
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/86 (43%), Positives = 54/86 (62%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF + +H L++LSH V+DMSSE+ SA +SFV FS+LIL + S + MS
Sbjct: 1493 FFRNVQVEHALLILSHCVHDMSSEETTFMCSAHSSLLSFVDFSALILHEEGNSEEHMSGM 1552
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
+ + + CWTK+C+ R+ +KF LKH
Sbjct: 1553 K---NIDSCWTKSCILRVAKKFLLKH 1575
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSECE 194
F TI DH+L++LSH V DMSS+++ILR SA +SFV FSSLIL+ + + +E+ +
Sbjct: 1068 FHTIEVDHSLVILSHCVRDMSSDEMILRHSAYRSLLSFVEFSSLILNRERCNTREVMQ-- 1125
Query: 195 VAVDTNPCWTKACVQRIIQKFFLK 266
AVD + WT +QRII KF LK
Sbjct: 1126 -AVD-DGLWTIGSIQRIINKFILK 1147
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSECE 194
F TI DH+L++LSH V DMSS+++ILR SA +SFV FSSLIL+ + + +E+ +
Sbjct: 1464 FHTIEVDHSLVILSHCVRDMSSDEMILRHSAYRSLLSFVEFSSLILNRERCNTREVMQ-- 1521
Query: 195 VAVDTNPCWTKACVQRIIQKFFLK 266
AVD + WT +QRII KF LK
Sbjct: 1522 -AVD-DGLWTIGSIQRIINKFILK 1543
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSECE 194
F TI DH+L++LSH V DMSS+++ILR SA +SFV FSSLIL+ + + +E+ +
Sbjct: 1465 FHTIEVDHSLVILSHCVRDMSSDEMILRHSAYRSLLSFVEFSSLILNRERCNTREVMQ-- 1522
Query: 195 VAVDTNPCWTKACVQRIIQKFFLK 266
AVD + WT +QRII KF LK
Sbjct: 1523 -AVD-DGLWTIGSIQRIINKFILK 1544
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSECE 194
F TI DH+L++LSH V DMSS+++ILR SA +SFV FSSLIL+ + + E+ +
Sbjct: 1439 FHTIEVDHSLVILSHCVRDMSSDEMILRHSAYRSLLSFVEFSSLILNRERCNTHEVMQ-- 1496
Query: 195 VAVDTNPCWTKACVQRIIQKFFLK 266
AVD + WT +QRII KF LK
Sbjct: 1497 -AVD-DSLWTIGSIQRIINKFILK 1518
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +3
Query: 15 FSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSECE 194
F TI D L++LSH VYDMSS D+ LR A +SFV FSS IL + ++ ++ CE
Sbjct: 1323 FYTIPVDQALVILSHCVYDMSSVDITLRHCAYSSLLSFVEFSSAILCGEDQNQPVITNCE 1382
Query: 195 VAVDTNPCWTKACVQRIIQKFFLKH 269
CWT+A +QR I KF LK+
Sbjct: 1383 ------GCWTRASIQRTINKFLLKY 1401
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
homolog, partial [Cucumis sativus]
Length = 2538
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF +E+H L++LS ++DMSSE+LILR SA +SFV FSS +L S QE S+
Sbjct: 1339 FFCATSEEHALVVLSQCMHDMSSEELILRHSAYRCLLSFVEFSSSVLGQGGISHQESSDN 1398
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
D + W+K + R+ KF KH
Sbjct: 1399 ITLYDNS--WSKESIMRLTNKFIFKH 1422
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF +E+H L++LS ++DMSSE+LILR SA +SFV FSS +L S QE S+
Sbjct: 1497 FFCATSEEHALVVLSQCMHDMSSEELILRHSAYRCLLSFVEFSSSVLGQGGISHQESSDN 1556
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
D + W+K + R+ KF KH
Sbjct: 1557 ITLYDNS--WSKESIMRLTNKFIFKH 1580
>gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis]
Length = 2341
Score = 68.6 bits (166), Expect = 9e-10
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +3
Query: 12 FFSTITEDHTLILLSHSVYDMSSEDLILRQSASMLFISFVHFSSLILDHQVESGQEMSEC 191
FF T+ E+ L++LSH V+DMSSE+LILR +A + FV F+SLIL +VE E C
Sbjct: 1095 FFYTVPEEQALLVLSHCVFDMSSEELILRHTAYKSLLLFVEFTSLILG-EVEDDLE-RPC 1152
Query: 192 EVAVDTNPCWTKACVQRIIQKFFLKH 269
+ D WT+ ++R++ KF LKH
Sbjct: 1153 KRTND--GYWTRGSIKRVMSKFLLKH 1176