BLASTX nr result
ID: Cocculus23_contig00028455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00028455
(749 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007026458.1| Uncharacterized protein TCM_021522 [Theobrom... 64 7e-08
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 62 2e-07
gb|ABD32401.2| Ribonuclease H [Medicago truncatula] 62 2e-07
ref|XP_007026457.1| Uncharacterized protein TCM_021521 [Theobrom... 61 4e-07
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A... 61 4e-07
ref|XP_007031313.1| Uncharacterized protein TCM_016763 [Theobrom... 60 6e-07
ref|XP_004287420.1| PREDICTED: uncharacterized protein LOC101302... 60 6e-07
ref|XP_004292485.1| PREDICTED: putative ribonuclease H protein A... 60 8e-07
ref|XP_004305448.1| PREDICTED: putative ribonuclease H protein A... 59 1e-06
ref|XP_004513875.1| PREDICTED: putative ribonuclease H protein A... 59 2e-06
ref|XP_007226764.1| hypothetical protein PRUPE_ppa018732mg [Prun... 59 2e-06
ref|XP_004305757.1| PREDICTED: putative ribonuclease H protein A... 59 2e-06
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 59 2e-06
emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group] 58 3e-06
ref|XP_007010390.1| Retrotransposon, unclassified-like protein [... 58 4e-06
gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays] 58 4e-06
ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein A... 57 5e-06
ref|XP_004299997.1| PREDICTED: putative ribonuclease H protein A... 57 9e-06
gb|ABD28646.1| Ribonuclease H [Medicago truncatula] 57 9e-06
gb|ABN09044.1| Ribonuclease H [Medicago truncatula] 57 9e-06
>ref|XP_007026458.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
gi|508715063|gb|EOY06960.1| Uncharacterized protein
TCM_021522 [Theobroma cacao]
Length = 3503
Score = 63.5 bits (153), Expect = 7e-08
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = -2
Query: 553 RLVSWPSPPMDYFALSVDGSF-SSFRGGYGAVITNHKAELIVAAAGTCPPISALYTEAFA 377
+++SW P + + L+VDGS SS G V+ +H +L A + P+ +L E A
Sbjct: 1541 QIISWIKPFIGEYKLNVDGSSKSSQNAAGGGVLRDHTGKLAFAFSENLGPLPSLQAELHA 1600
Query: 376 LWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVISH 197
L R L L ++ IT+ I D + V MV + I L+++ + +RS + ISH
Sbjct: 1601 LLRGLLLCKERNITNLWIEMDALVAVQMVQQSQKGSHDIRYLLESIRLCLRSFSYR-ISH 1659
Query: 196 VQRGANQCADCLS 158
+ R NQ AD LS
Sbjct: 1660 IYREGNQAADFLS 1672
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 62.0 bits (149), Expect = 2e-07
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = -2
Query: 547 VSWPSPPMDYFALSVDGSFS--SFRGGYGAVITNHKAELIVAAAGT-CPPISALYTEAFA 377
V W P + L+VDGS+ GG GAV+ N + +LI AA G+ C P+SAL E A
Sbjct: 1140 VRWVRPQAGWMKLNVDGSYDPRDGSGGIGAVLRNSEGKLIFAACGSMCRPVSALEAELVA 1199
Query: 376 LWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVISH 197
+ L Q+ ++ +D LV +V ++ + LI+ K +++ +R VI+
Sbjct: 1200 CKEGIILALQWTFLPIIVETDCLELVKLVAEQGKVMSDLGFLIREIKDLVKGNREIVINK 1259
Query: 196 VQR 188
V R
Sbjct: 1260 VTR 1262
>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = -2
Query: 553 RLVSWPSPPMDYFALSVDGSFSSF--RGGYGAVITNHKAELIVAAAGTCP-PISALYTEA 383
RLV W + F L+VDGS R GYG V+ N I +G P L E
Sbjct: 64 RLVKWNNRNHQDFILNVDGSCIGTPPRTGYGGVLRNSAGLFISGFSGLIPNSADILLAEL 123
Query: 382 FALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVI 203
A+ + L LV + + YSD + V+++ ++ + LIQ K ++ + R+ +
Sbjct: 124 TAIHQGLKLVTDLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKDLL-NDRNISL 182
Query: 202 SHVQRGANQCADCLSKWIQNS 140
H R NQCAD +K+ NS
Sbjct: 183 HHTLREGNQCADFFAKFGANS 203
>ref|XP_007026457.1| Uncharacterized protein TCM_021521 [Theobroma cacao]
gi|508715062|gb|EOY06959.1| Uncharacterized protein
TCM_021521 [Theobroma cacao]
Length = 1951
Score = 61.2 bits (147), Expect = 4e-07
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = -2
Query: 553 RLVSWPSPPMDYFALSVDGSF-SSFRGGYGAVITNHKAELIVAAAGTCPPISALYTEAFA 377
+++ W P + + L+VDGS S+ G V+ +H +L A + P+ +L E A
Sbjct: 1784 QIIYWIKPFIGEYKLNVDGSSKSNLNAAGGGVLRDHTGKLAFAFSENLGPLPSLQAELHA 1843
Query: 376 LWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVISH 197
L R L L ++ IT+ I D + V MV + I L+++ + +RS + ISH
Sbjct: 1844 LLRGLLLCKERNITNLWIEMDALVAVQMVQQSQKGSHDIRYLLESIRLCLRSFSYR-ISH 1902
Query: 196 VQRGANQCADCLS 158
+ R NQ AD LS
Sbjct: 1903 IYREGNQAADFLS 1915
>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 727
Score = 61.2 bits (147), Expect = 4e-07
Identities = 33/132 (25%), Positives = 61/132 (46%)
Frame = -2
Query: 562 KPSRLVSWPSPPMDYFALSVDGSFSSFRGGYGAVITNHKAELIVAAAGTCPPISALYTEA 383
K + W PP F ++ DGS +S G +I N + I+ ++ S TEA
Sbjct: 554 KTPSAIKWQPPPASTFKVNFDGSVTSSSAACGTIIRNSEGVPIITSSKNIGKASVPTTEA 613
Query: 382 FALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVI 203
AL + + + +T ++ D +I++ +V + S W + +I+ K + + +
Sbjct: 614 TALRDSILIAKNRGLTRIIVEGDSKIIIDVVNGKISTPWRLQQIIEDIKNLAQEFQEICF 673
Query: 202 SHVQRGANQCAD 167
+H+ R AN AD
Sbjct: 674 NHIYREANFAAD 685
>ref|XP_007031313.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
gi|508710342|gb|EOY02239.1| Uncharacterized protein
TCM_016763 [Theobroma cacao]
Length = 2127
Score = 60.5 bits (145), Expect = 6e-07
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Frame = -2
Query: 742 IWMERNLRRFQHKARSADNI---SQDICFEVENSINSTCPTSSFFESVDFICRI*RKISN 572
+W+ERN + +H AD + + C ++ + S + D + ++
Sbjct: 1897 LWLERNDAKHRHTGLYADRVIWRTMKHCRQLYDG--SLLQQWQWKGDTDIATMLGFSFTH 1954
Query: 571 FEAKPSRLVSWPSPPMDYFALSVDGSF-SSFRGGYGAVITNHKAELIVAAAGTCPPISAL 395
+ P +++ W P + + L+VDGS + G V+ +H +LI + P ++L
Sbjct: 1955 KQHAPPQIIYWKKPSIGEYKLNVDGSSRNGLHAATGGVLRDHTGKLIFGFSENIGPCNSL 2014
Query: 394 YTEAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSR 215
E AL R L L ++ I I D + + ++ + + L+++ + + S
Sbjct: 2015 QAELRALLRGLLLCKERHIEKLWIEMDALVAIQLIQPSKKGPYNLRYLLESIRMCLSSFS 2074
Query: 214 HGVISHVQRGANQCADCLS 158
+ +SH+ R NQ AD LS
Sbjct: 2075 YR-LSHILREGNQAADYLS 2092
>ref|XP_004287420.1| PREDICTED: uncharacterized protein LOC101302388 [Fragaria vesca
subsp. vesca]
Length = 425
Score = 60.5 bits (145), Expect = 6e-07
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Frame = -2
Query: 577 SNFEA-----KPSRLVSWPSPPMDYFALSVDGSFSSFRGGYGAVITNHKAELIVAAAGTC 413
+NFE +P RL W P + + L+ DGS G+G ++ N+K E I A
Sbjct: 245 TNFEKWSRILRPIRLCRWKKPQVGWTKLNTDGSVDPGNAGFGGLLRNYKGEPICAFVSKA 304
Query: 412 PPISALYTEAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQ 233
E +A+WR L L I + SD +V + + + S ++ +
Sbjct: 305 LGDDTFLVELWAIWRGLILASSLGIKVLWVESDSLSVVKTINRDQPYSLKASSCLKHIWE 364
Query: 232 VIRSSRHGVISHVQRGANQCADCLSKWIQNSID 134
+++ +SH R N+ AD L+K + + D
Sbjct: 365 LLKKFDEHRVSHSWRETNRAADHLAKMVLSESD 397
>ref|XP_004292485.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 207
Score = 60.1 bits (144), Expect = 8e-07
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = -2
Query: 550 LVSWPSPPMDYFALSVDGSFSSFRG--GYGAVITNHKAELIVAAAGTCPPISALYTEAFA 377
++SW PP Y+ L++DG+ S G G G VI NH I + A+ EA+
Sbjct: 33 MLSWTMPPQSYYKLNIDGTRVSSSGMIGAGGVIRNHSDAWITGFQINLG-VGAIDAEAWG 91
Query: 376 LWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVISH 197
L+ L L I+ I SD ILV ++ + + L+ K ++ +SH
Sbjct: 92 LFHGLKLASNLHISKLEIESDSAILVHLMKSANLSLHPLGSLLNGCKSMMSQMDDVKLSH 151
Query: 196 VQRGANQCADCLSK 155
V R +N AD L+K
Sbjct: 152 VFRESNMTADVLAK 165
>ref|XP_004305448.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 171
Score = 59.3 bits (142), Expect = 1e-06
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = -2
Query: 532 PPMDYFALSVDGSFSSFRG--GYGAVITNHKAELIVAAAGTCPPISALYTEAFALWRDLH 359
PP+++F L++DG+ ++ G G G VI NH I+ L EA+ L+ L
Sbjct: 2 PPLNFFKLNIDGTRATASGKIGAGGVIRNHAGTWIIGFQINLGVGEILTAEAWGLFYGLK 61
Query: 358 LVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVISHVQRGAN 179
LV + +I++ + SD ILV+++ A + L+ +++ + +SH+ R +N
Sbjct: 62 LVVKLQISNLEVESDSAILVNLMQSSNLALHPLGSLLDGCCKLMSRMENAKLSHIFRESN 121
Query: 178 QCADCLSK 155
AD L+K
Sbjct: 122 MTADALAK 129
>ref|XP_004513875.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cicer
arietinum]
Length = 217
Score = 58.9 bits (141), Expect = 2e-06
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Frame = -2
Query: 559 PSRLVSWPSPPMDYFALSVDGSF--SSFRGGYGAVITNHKAELIVAAAGTCPPISALYTE 386
P RLV WP P AL+VDGS + R GYG +I +HK ++ + L E
Sbjct: 6 PWRLVIWPPPSEHQVALNVDGSSYGNPSRAGYGGLIRDHKGSWVLGFSAHISFADNLEVE 65
Query: 385 AFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGV 206
A+ L L SD +S++ D S +I + K+++ SR V
Sbjct: 66 LLAVLNGLMLAWDIGCKDVSCRSDCMEALSLIQDPTSQPHKYDEIILSIKELV--SRDWV 123
Query: 205 IS--HVQRGANQCADCLSKWIQNSI 137
+S H R NQCAD ++K N++
Sbjct: 124 VSFAHTYREDNQCADFMAKLGANAM 148
>ref|XP_007226764.1| hypothetical protein PRUPE_ppa018732mg [Prunus persica]
gi|462423700|gb|EMJ27963.1| hypothetical protein
PRUPE_ppa018732mg [Prunus persica]
Length = 430
Score = 58.9 bits (141), Expect = 2e-06
Identities = 35/139 (25%), Positives = 61/139 (43%)
Frame = -2
Query: 565 AKPSRLVSWPSPPMDYFALSVDGSFSSFRGGYGAVITNHKAELIVAAAGTCPPISALYTE 386
A+P R+ W P + + L+ DGS GYG ++ ++K + I A E
Sbjct: 259 ARPIRMCIWKKPELGWTKLNTDGSVDRENAGYGGLLRDYKGDPICAFVSKALGDDIFLVE 318
Query: 385 AFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGV 206
+A+WR L L I + SD + +V + + + S ++ +++
Sbjct: 319 LWAIWRGLVLALSLGIKVIWVESDSESVVQTINRDRPYSQKASSCLKHIWELLNKFDKHQ 378
Query: 205 ISHVQRGANQCADCLSKWI 149
+SH R N+ AD LSK +
Sbjct: 379 VSHSWRETNRAADHLSKMV 397
>ref|XP_004305757.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 395
Score = 58.5 bits (140), Expect = 2e-06
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Frame = -2
Query: 544 SWPSPPMDYFALSVDGSFSSFRG--GYGAVITNHKAELIVAAAGTCPPISALYTEAFALW 371
+W PP ++F L+VDG+ S G G G VI NH + I L EA+ L+
Sbjct: 239 AWKKPPENFFNLNVDGTRVSLTGKIGAGGVIRNHYGDWISGFQINLGVGEILDAEAWGLF 298
Query: 370 RDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIR--SSRHGVISH 197
+ L L I + +I SD ILV ++ + + L+Q ++ + +SH
Sbjct: 299 QGLKLAVSLNINNLIIESDSAILVQLMNNSEFGNHPLGSLLQGCSSLMNKMEMKSATLSH 358
Query: 196 VQRGANQCADCLSK 155
+ R N D L+K
Sbjct: 359 IFRECNSTTDALAK 372
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 58.5 bits (140), Expect = 2e-06
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Frame = -2
Query: 745 DIWMERNLRRFQHKARSADNISQDICFEVENSINSTCPT----SSFFESVDFI--CRI*R 584
++W R ++ +K+ S + I +V I P+ SS+ + ++ + C+
Sbjct: 1018 NLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIVEHCKQQY 1077
Query: 583 KISNFEAKPSRLVSWPSPPMDYFALSVDGSFSSFRG--GYGAVITNHKAELIVAAA---- 422
KI LVSW P + + L+ DGS G G G ++ +H+ +++ A +
Sbjct: 1078 KIV--------LVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFG 1129
Query: 421 -GTCPPISALYTEAFAL-WRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLI 248
GT I+ + + L W D H ++ + D Q+L + + ++ + W LI
Sbjct: 1130 FGT-NNIAEIKAALYGLEWCDQHGYKRVELEV-----DSQLLCNWIKNKTNIPWIYEDLI 1183
Query: 247 QASKQVIRSSRHGVISHVQRGANQCADCLSKW 152
Q KQ+ R H+ R AN AD LSKW
Sbjct: 1184 QQIKQITRKIEQFQCHHIYREANITADLLSKW 1215
>emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]
Length = 611
Score = 58.2 bits (139), Expect = 3e-06
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = -2
Query: 583 KISNFEAKPSRLVSWPSPPMDYFALSVDGSF--SSFRGGYGAVITNHKAELIVAAAGTCP 410
KI + A L+ W P + L+VDGSF SS +GG GAV+ N + E+I +A G
Sbjct: 436 KIKDTSASTPVLLRWEKPNQGWMKLNVDGSFDASSGKGGIGAVLRNSQGEVIFSACGFLD 495
Query: 409 PISA-LYTEAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQ 233
S L E A +++ Q+ + ++ D V ++ + ++ ++ KQ
Sbjct: 496 RCSGPLEVELLACKEGINMALQWTLLPIVVEMDCSEAVKLISSVSKGRSEVAFIVNDIKQ 555
Query: 232 VIRSSRHGVISHVQRGANQCADCLS 158
++ +R +I + N C+ L+
Sbjct: 556 LMFGNREIIIRKIHHNQNGCSHILA 580
>ref|XP_007010390.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
gi|508727303|gb|EOY19200.1| Retrotransposon,
unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 57.8 bits (138), Expect = 4e-06
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Frame = -2
Query: 568 EAKPSRLVSWPSPPMDYFALSVDGS----FSSFRGGYGAVITNHKAELIVAAAGTCPPIS 401
+A+P ++++W P + L+VDGS F + GG V+ +H LI + +
Sbjct: 1164 QARP-KIINWIKPLIGELKLNVDGSSKDEFQNAAGG--GVLRDHTGNLIFGFSENFGYQN 1220
Query: 400 ALYTEAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIR- 224
+L E AL R L L ++ ++ I D Q+++ M+ + ++ I L+++ ++ ++
Sbjct: 1221 SLQAELLALHRGLCLCMEYNVSRVWIEVDAQVVIQMIQNHHKGSYKIQYLLESIRKCLQV 1280
Query: 223 -SSRHGVISHVQRGANQCADCLSK 155
S R ISH+ R NQ AD LSK
Sbjct: 1281 ISVR---ISHIHREGNQAADFLSK 1301
>gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays]
Length = 279
Score = 57.8 bits (138), Expect = 4e-06
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Frame = -2
Query: 559 PSRLVSWPSPPMDYFALSVDGSF--SSFRGGYGAVITNHKAELIVAAAGTCPPISA-LYT 389
P + W PP ++ ++ DGS+ S GG+G +I H + A AGT IS+ L+
Sbjct: 108 PPMNLKWQPPPAGFYKINCDGSYLAKSGLGGWGCIIRGHDGSFLAAGAGTLTGISSTLHA 167
Query: 388 EAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHG 209
E+ A + L L + + +I +D IL + + S + +S L K+ IRS
Sbjct: 168 ESVACMKGLELAVFLGMQNVMIETDAAILKTAL---TSQEYDLSALGVVFKE-IRSRMFS 223
Query: 208 -----VISHVQRGANQCADCLSKWIQNSID 134
++S QR N ADCL+ NS D
Sbjct: 224 EFACCIVSKCQRTCNLVADCLTAHGANSGD 253
>ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 214
Score = 57.4 bits (137), Expect = 5e-06
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Frame = -2
Query: 562 KPSRLVSWPSPPMDYFALSVDGSFSSFRGGYGAVITNHKAELIVAAAGTCPPISALYTEA 383
+P +++W SPP ++ DGS SS GA+I + K I+A+ S EA
Sbjct: 69 QPPEVITWLSPPNKTVKINFDGSVSSNSAASGAIIRDSKGNPILASTRNLGSTSVPVAEA 128
Query: 382 FALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVI 203
AL L V++ ++ D ++++ ++ + + W I ++ +++ S
Sbjct: 129 TALRDSLLSVKEKGFIDVVVEGDSKLVIDVMTQKINPPWRIHQIVDDIRKIAESFSSISF 188
Query: 202 SHVQRGANQCADC-LSKWIQNSIDR 131
HV R AN AD +S QNS R
Sbjct: 189 HHVYREANFAADAVVSYGHQNSSGR 213
>ref|XP_004299997.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 448
Score = 56.6 bits (135), Expect = 9e-06
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Frame = -2
Query: 547 VSWPSPPMDYFALSVDGSFSSFRG--GYGAVITNHKAELIVAAAGTCPPISALYTEAFAL 374
+SW PP + L++DG+ SS G G G V+ +H I LY EA+ L
Sbjct: 274 LSWLRPPANCLKLNIDGTRSSSSGKIGAGGVLRDHAGNWIFGCQINLGVGEVLYAEAWGL 333
Query: 373 WRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRHGVISHV 194
L LV +F + + SD +LV ++ + + L+ A + + +SH+
Sbjct: 334 LFGLKLVAKFYCSDLEVESDSAVLVQLMQKRSFELHPLGSLLSACSSFMSKMPNVKLSHI 393
Query: 193 QRGANQCADCLSK 155
R N AD L+K
Sbjct: 394 FRECNMVADSLAK 406
>gb|ABD28646.1| Ribonuclease H [Medicago truncatula]
Length = 208
Score = 56.6 bits (135), Expect = 9e-06
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Frame = -2
Query: 574 NFEAKP-SRLVSWPSPPMDYFALSVDGSFSSF--RGGYGAVITNHKAELIVAAAG-TCPP 407
N A P R+V W S L+VDGS S R GYG +I N + +G
Sbjct: 31 NSSATPHDRMVRWNSNNHLCHILNVDGSCSGIPTRAGYGGIIRNSAGLYLSCFSGFIADS 90
Query: 406 ISALYTEAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVI 227
L E A+ R + + YSD + ++++ +AS + LIQ K ++
Sbjct: 91 TDILLAELTAIHRGFSIASDMGVNEMACYSDSLLSINLITGQASKYHAYAVLIQDIKDLL 150
Query: 226 RSSRHGVISHVQRGANQCADCLSKW 152
SS + I H R NQCAD ++K+
Sbjct: 151 -SSHNFSIQHCLREGNQCADFMAKF 174
>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
Length = 235
Score = 56.6 bits (135), Expect = 9e-06
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 3/199 (1%)
Frame = -2
Query: 742 IWMERNLRRFQHKARSADNISQDICFEVENSINSTC-PTSSFFESVDFICRI*RKISNFE 566
IW RN F+ S I + + + + + PTS +
Sbjct: 19 IWCSRNKCIFEDIKHSIQEIGAQVLSSLHHILKAFAHPTSHSVQ---------------- 62
Query: 565 AKPSRLVSWPSPPMDYFALSVDGS--FSSFRGGYGAVITNHKAELIVAAAGTCPPISALY 392
+P+R+VSW P M+ AL+VDG+ S G +G +I +H + + G L+
Sbjct: 63 -QPARIVSWQRPSMNSVALNVDGNVFLDSNLGSFGGLIRDHTSSFLHGFFGKNSRPCILH 121
Query: 391 TEAFALWRDLHLVQQFRITSFLIYSDPQILVSMVGDEASAAWYISPLIQASKQVIRSSRH 212
E L+ L L I + +SD +V +V + + LI A K+++R
Sbjct: 122 VEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWV 181
Query: 211 GVISHVQRGANQCADCLSK 155
+ H N AD L+K
Sbjct: 182 VSLRHTLCEGNAAADFLAK 200