BLASTX nr result
ID: Cocculus23_contig00027841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00027841
(232 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast... 126 3e-27
emb|CBI29133.3| unnamed protein product [Vitis vinifera] 126 3e-27
ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus... 123 3e-26
ref|XP_002526324.1| DNA gyrase subunit A, chloroplast/mitochondr... 122 4e-26
ref|XP_007219040.1| hypothetical protein PRUPE_ppa004605mg [Prun... 122 7e-26
ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplast... 119 3e-25
ref|XP_006445689.1| hypothetical protein CICLE_v10017460mg, part... 119 3e-25
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast... 115 6e-24
gb|EXB97701.1| DNA gyrase subunit A [Morus notabilis] 115 8e-24
ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [A... 114 1e-23
ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|50... 112 4e-23
ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula] g... 112 5e-23
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast... 111 9e-23
gb|ABD32640.1| WD40-like [Medicago truncatula] 111 1e-22
gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Mimulus... 110 2e-22
ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplast... 110 2e-22
ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplast... 110 2e-22
ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s... 110 2e-22
gb|EPS65552.1| hypothetical protein M569_09225, partial [Genlise... 110 3e-22
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast... 108 1e-21
>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 925
Score = 126 bits (317), Expect = 3e-27
Identities = 59/77 (76%), Positives = 71/77 (92%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMASQNGMVILSSCE +RALGRNTRGS+AMRL+ GDKMA +D
Sbjct: 718 VPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMD 777
Query: 51 IIPASMRKNLQWSSDNR 1
IIPA++RK+L+ + ++R
Sbjct: 778 IIPAAIRKDLEKALEDR 794
>emb|CBI29133.3| unnamed protein product [Vitis vinifera]
Length = 823
Score = 126 bits (317), Expect = 3e-27
Identities = 59/77 (76%), Positives = 71/77 (92%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMASQNGMVILSSCE +RALGRNTRGS+AMRL+ GDKMA +D
Sbjct: 616 VPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMD 675
Query: 51 IIPASMRKNLQWSSDNR 1
IIPA++RK+L+ + ++R
Sbjct: 676 IIPAAIRKDLEKALEDR 692
>ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus trichocarpa]
gi|550330577|gb|EEF01573.2| DNA gyrase subunit A family
protein [Populus trichocarpa]
Length = 948
Score = 123 bits (308), Expect = 3e-26
Identities = 58/74 (78%), Positives = 68/74 (91%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMASQNGMVIL+SCE +RALGRNTRG VAMRLR GDK+A +D
Sbjct: 737 VPGDELKWVRCCTNGDLVAMASQNGMVILTSCENIRALGRNTRGGVAMRLREGDKIASMD 796
Query: 51 IIPASMRKNLQWSS 10
IIPAS++K+L+ +S
Sbjct: 797 IIPASLQKDLEVAS 810
>ref|XP_002526324.1| DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative
[Ricinus communis] gi|223534351|gb|EEF36060.1| DNA
gyrase subunit A, chloroplast/mitochondrial precursor,
putative [Ricinus communis]
Length = 433
Score = 122 bits (307), Expect = 4e-26
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMAS NGMVILSSCE +RAL RNTRG VAMRL+GGDKMA +D
Sbjct: 212 VPGDELKWVRCCTNNDLVAMASLNGMVILSSCENIRALSRNTRGGVAMRLKGGDKMASMD 271
Query: 51 IIPASMRKNLQ 19
IIP +MRK+L+
Sbjct: 272 IIPVAMRKDLE 282
>ref|XP_007219040.1| hypothetical protein PRUPE_ppa004605mg [Prunus persica]
gi|462415502|gb|EMJ20239.1| hypothetical protein
PRUPE_ppa004605mg [Prunus persica]
Length = 500
Score = 122 bits (305), Expect = 7e-26
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMASQNGMVILSS + +RALGRNTRG+VAMRL+ GDKMA VD
Sbjct: 293 VPGDELKWVRCCTNDDLVAMASQNGMVILSSSDIIRALGRNTRGAVAMRLKEGDKMASVD 352
Query: 51 IIPASMRKNLQ 19
IIPA+MRK+L+
Sbjct: 353 IIPAAMRKDLE 363
>ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Citrus sinensis]
Length = 942
Score = 119 bits (299), Expect = 3e-25
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMASQNGMVILSSC+ +R+L RNTRGSVAMRL+ GDKMA +D
Sbjct: 722 VPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRSLSRNTRGSVAMRLKDGDKMASMD 781
Query: 51 IIPASMRKNLQ 19
IIPA++ K+L+
Sbjct: 782 IIPAALHKDLE 792
>ref|XP_006445689.1| hypothetical protein CICLE_v10017460mg, partial [Citrus clementina]
gi|557548300|gb|ESR58929.1| hypothetical protein
CICLE_v10017460mg, partial [Citrus clementina]
Length = 322
Score = 119 bits (299), Expect = 3e-25
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMASQNGMVILSSC+ +R+L RNTRGSVAMRL+ GDKMA +D
Sbjct: 83 VPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRSLSRNTRGSVAMRLKDGDKMASMD 142
Query: 51 IIPASMRKNLQ 19
IIPA++ K+L+
Sbjct: 143 IIPAALHKDLE 153
>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 939
Score = 115 bits (288), Expect = 6e-24
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN DL+AMAS NGMVIL S + +RALGRNTRGSVAMRL+ GDKMA VD
Sbjct: 730 VPGDELKWVRCCTNDDLVAMASLNGMVILCSSDIIRALGRNTRGSVAMRLKEGDKMASVD 789
Query: 51 IIPASMRKNLQWSSD 7
IIPA+M K+L+ S+
Sbjct: 790 IIPAAMWKDLKRVSE 804
>gb|EXB97701.1| DNA gyrase subunit A [Morus notabilis]
Length = 1024
Score = 115 bits (287), Expect = 8e-24
Identities = 52/69 (75%), Positives = 62/69 (89%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCC+N D++AMASQNGMVIL+SC+ +R GRNTRG+VAMRL+ GDKMA VD
Sbjct: 820 VPGDELKWVRCCSNDDVVAMASQNGMVILTSCDKIRTQGRNTRGAVAMRLKAGDKMASVD 879
Query: 51 IIPASMRKN 25
IIP +MRK+
Sbjct: 880 IIPGAMRKD 888
>ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [Amborella trichopoda]
gi|548835451|gb|ERM97286.1| hypothetical protein
AMTR_s00119p00135690 [Amborella trichopoda]
Length = 963
Score = 114 bits (286), Expect = 1e-23
Identities = 54/71 (76%), Positives = 64/71 (90%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVR C+N DLIAMASQ+GMV+LSSCETLRA+GR RG V+MRL+ GD+MA +D
Sbjct: 763 VPGDELKWVRLCSNDDLIAMASQSGMVLLSSCETLRAIGRTARGVVSMRLKDGDRMASMD 822
Query: 51 IIPASMRKNLQ 19
IIPA+M+KNLQ
Sbjct: 823 IIPAAMQKNLQ 833
>ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|508727564|gb|EOY19461.1|
DNA gyrase subunit A [Theobroma cacao]
Length = 1368
Score = 112 bits (281), Expect = 4e-23
Identities = 53/76 (69%), Positives = 63/76 (82%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCC N DL+AMASQNGMVILSSC +RAL RNTRG++AMRL+ GDKMA +D
Sbjct: 721 VPGDELKWVRCCINDDLVAMASQNGMVILSSCGIIRALSRNTRGAIAMRLKEGDKMASMD 780
Query: 51 IIPASMRKNLQWSSDN 4
IIPA K+L + ++
Sbjct: 781 IIPAPRHKDLDKAEED 796
>ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula]
gi|355478707|gb|AES59910.1| DNA gyrase subunit A
[Medicago truncatula]
Length = 992
Score = 112 bits (280), Expect = 5e-23
Identities = 52/71 (73%), Positives = 60/71 (84%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN D +AMAS NGMVILS C +R LGRNTRG++AMRL+ GD+MA VD
Sbjct: 786 VPGDELKWVRCCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRGALAMRLKEGDRMASVD 845
Query: 51 IIPASMRKNLQ 19
IIPA+M NL+
Sbjct: 846 IIPAAMWNNLE 856
>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 923
Score = 111 bits (278), Expect = 9e-23
Identities = 54/74 (72%), Positives = 66/74 (89%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
V GDELKWVR CTN +L+AMASQNGMVILSSC+T+RALGRNTRGSVAM+L+ GDKMA +D
Sbjct: 727 VSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRALGRNTRGSVAMKLKTGDKMASMD 786
Query: 51 IIPASMRKNLQWSS 10
IIPA++ +L+ +S
Sbjct: 787 IIPAAVWNDLERNS 800
>gb|ABD32640.1| WD40-like [Medicago truncatula]
Length = 398
Score = 111 bits (277), Expect = 1e-22
Identities = 52/71 (73%), Positives = 60/71 (84%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVRCCTN D +AMAS NGMVILS C +R LGRNTRG++AMRL+ GD+MA VD
Sbjct: 192 VPGDELKWVRCCTNDDFVAMASHNGMVILSLCIQIRTLGRNTRGALAMRLKEGDRMASVD 251
Query: 51 IIPASMRKNLQ 19
IIPA+M NL+
Sbjct: 252 IIPAAMWNNLE 262
>gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Mimulus guttatus]
Length = 928
Score = 110 bits (276), Expect = 2e-22
Identities = 53/71 (74%), Positives = 59/71 (83%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWVR CTN + +AMASQNGMVILS CE +RALGRNTRG VAMRL+ DKMAC+D
Sbjct: 722 VPGDELKWVRRCTNDEFVAMASQNGMVILSPCEKVRALGRNTRGGVAMRLKPEDKMACID 781
Query: 51 IIPASMRKNLQ 19
IIPAS L+
Sbjct: 782 IIPASFGTKLE 792
>ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
isoform X2 [Cicer arietinum]
Length = 944
Score = 110 bits (276), Expect = 2e-22
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGD+LKWVRCCTN D +AMAS NGMVILS C +R LGRNTRG +AMRLR GD+MA VD
Sbjct: 738 VPGDKLKWVRCCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRGGLAMRLREGDRMASVD 797
Query: 51 IIPASMRKNLQ 19
IIPASM +L+
Sbjct: 798 IIPASMWNDLE 808
>ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
isoform X1 [Cicer arietinum]
Length = 942
Score = 110 bits (276), Expect = 2e-22
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGD+LKWVRCCTN D +AMAS NGMVILS C +R LGRNTRG +AMRLR GD+MA VD
Sbjct: 736 VPGDKLKWVRCCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRGGLAMRLREGDRMASVD 795
Query: 51 IIPASMRKNLQ 19
IIPASM +L+
Sbjct: 796 IIPASMWNDLE 806
>ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
chloroplastic/mitochondrial-like, partial [Cucumis
sativus]
Length = 799
Score = 110 bits (276), Expect = 2e-22
Identities = 53/71 (74%), Positives = 64/71 (90%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
V GDELKWVR CTN +L+AMASQNGMVILSSC+T+RALGRNTRGSVAM+L+ GDKMA +D
Sbjct: 727 VSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRALGRNTRGSVAMKLKTGDKMASMD 786
Query: 51 IIPASMRKNLQ 19
IIPA++ +L+
Sbjct: 787 IIPAAVWNDLE 797
>gb|EPS65552.1| hypothetical protein M569_09225, partial [Genlisea aurea]
Length = 206
Score = 110 bits (274), Expect = 3e-22
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGD L+WVR C N+DL+AMASQNGMVILS C+ +RALGRNTRG +AMRL+ GDKMA +D
Sbjct: 1 VPGDTLRWVRRCNNEDLVAMASQNGMVILSPCKDIRALGRNTRGGIAMRLKEGDKMASMD 60
Query: 51 IIPASMRKNLQWSS 10
IIPAS+ K L+ S
Sbjct: 61 IIPASLAKKLEEGS 74
>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
isoform X3 [Solanum tuberosum]
Length = 957
Score = 108 bits (269), Expect = 1e-21
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = -2
Query: 231 VPGDELKWVRCCTNKDLIAMASQNGMVILSSCETLRALGRNTRGSVAMRLRGGDKMACVD 52
VPGDELKWV+CC+N D +AMAS NGMVIL+ C +RALGRNTRGSVAMRL+ GDK+A +D
Sbjct: 746 VPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMD 805
Query: 51 IIPASMRKNL 22
IIP +++K L
Sbjct: 806 IIPDALQKEL 815