BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027499
         (1675 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007225674.1| hypothetical protein PRUPE_ppa002602mg [Prun...   861   0.0  
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   856   0.0  
ref|XP_004303188.1| PREDICTED: pentatricopeptide repeat-containi...   843   0.0  
ref|XP_006419949.1| hypothetical protein CICLE_v10006593mg [Citr...   834   0.0  
ref|XP_006489403.1| PREDICTED: pentatricopeptide repeat-containi...   832   0.0  
ref|XP_002314694.1| hypothetical protein POPTR_0010s09690g [Popu...   826   0.0  
gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis]     823   0.0  
ref|XP_007034774.1| Pentatricopeptide repeat (PPR) superfamily p...   814   0.0  
ref|XP_007034772.1| Pentatricopeptide repeat (PPR) superfamily p...   814   0.0  
ref|XP_006340539.1| PREDICTED: pentatricopeptide repeat-containi...   801   0.0  
ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ...   798   0.0  
ref|XP_004496720.1| PREDICTED: pentatricopeptide repeat-containi...   795   0.0  
ref|XP_004231485.1| PREDICTED: pentatricopeptide repeat-containi...   792   0.0  
ref|XP_007143263.1| hypothetical protein PHAVU_007G057700g [Phas...   791   0.0  
ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   789   0.0  
ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arab...   774   0.0  
ref|NP_193221.3| pentatricopeptide repeat-containing protein LOI...   768   0.0  
gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]                       768   0.0  
ref|XP_006283247.1| hypothetical protein CARUB_v10004282mg [Caps...   767   0.0  
gb|EYU45680.1| hypothetical protein MIMGU_mgv1a026212mg [Mimulus...   765   0.0  

>ref|XP_007225674.1| hypothetical protein PRUPE_ppa002602mg [Prunus persica]
            gi|462422610|gb|EMJ26873.1| hypothetical protein
            PRUPE_ppa002602mg [Prunus persica]
          Length = 653

 Score =  861 bits (2225), Expect = 0.0
 Identities = 412/557 (73%), Positives = 480/557 (86%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+H L++K+G   DVFVGCSAFDMYCKTGLR++ARKVFDEMPERN+ATWNAY+SN+V
Sbjct: 95   TGKQVHALAVKAGQICDVFVGCSAFDMYCKTGLRDEARKVFDEMPERNLATWNAYMSNAV 154

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR + A   F+EF   GGE NSIT+CA LN CSDT ++ LGRQ+HGF++R G  +DVS
Sbjct: 155  LDGRPQNAVYKFIEFLRAGGEPNSITFCAFLNACSDTSNLELGRQLHGFVMRCGFGKDVS 214

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGL+DFYGKC E+ S+ MVF  +  RN VSWCS+VA   QNDEEE AC  FL +R+EG
Sbjct: 215  VLNGLIDFYGKCREVGSSMMVFDTIDKRNDVSWCSLVAACVQNDEEEMACELFLRARKEG 274

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++PTDFM SSVLSAC+GLA LE GRSVHA+AVKACV+ N++VGSALVDMYGKCG+IED +
Sbjct: 275  VEPTDFMVSSVLSACSGLAWLEQGRSVHAIAVKACVEGNLFVGSALVDMYGKCGSIEDAK 334

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
             AF+ +P RNLI+WN M+GGYAHQGHA+MAL LF+EMT    HEV PNYVTLVCVLSACS
Sbjct: 335  CAFNGMPSRNLISWNAMVGGYAHQGHANMALVLFEEMTVRS-HEVKPNYVTLVCVLSACS 393

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE GM+IF SM+ +YG+EPGAEHYAC+VDL GRAGMVE+AYEFIT MPIRPT+S+W
Sbjct: 394  RAGAVETGMQIFESMKAKYGIEPGAEHYACVVDLLGRAGMVERAYEFITKMPIRPTISIW 453

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GALLGAC++Y K ELG++AADKLFELDPKDSGNHV+LSNMFAAAGRWE+AT+VRK MKDV
Sbjct: 454  GALLGACKMYRKTELGRVAADKLFELDPKDSGNHVILSNMFAAAGRWEEATLVRKGMKDV 513

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAG SWI+VKN VH+FQAKDTSHERNSEIQAML KLRR+M+ +GY  DTNFAL+DL
Sbjct: 514  GIKKGAGYSWIAVKNAVHVFQAKDTSHERNSEIQAMLTKLRREMEKAGYIADTNFALFDL 573

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EVWYHSEK+AL+FGLI+IPPGVPIRITKNLR+CGDCH AIKFIS IV REIIV
Sbjct: 574  EEEEKVSEVWYHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHGAIKFISGIVGREIIV 633

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFHRF+D HCSCR
Sbjct: 634  RDNNRFHRFRDGHCSCR 650



 Score =  154 bits (390), Expect = 9e-35
 Identities = 110/412 (26%), Positives = 183/412 (44%), Gaps = 4/412 (0%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+     +MY K  L + A+ V    P R+V TW A I+ SV  G    A   F      
Sbjct: 12   FLSNHLVNMYSKLDLPDSAQLVLQLNPSRSVVTWTALIAGSVQNGHFASAILHFANMLRE 71

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
              + N  T+               G+Q+H   +++G   DV VG    D Y K G  + A
Sbjct: 72   SVQPNDFTFPCAFKASGSLRLPATGKQVHALAVKAGQICDVFVGCSAFDMYCKTGLRDEA 131

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              VF  M  RN+ +W + ++    +   + A   F+   R G +P      + L+AC+  
Sbjct: 132  RKVFDEMPERNLATWNAYMSNAVLDGRPQNAVYKFIEFLRAGGEPNSITFCAFLNACSDT 191

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTML 900
            + LE+GR +H   ++    ++V V + L+D YGKC  +      FD I +RN ++W +++
Sbjct: 192  SNLELGRQLHGFVMRCGFGKDVSVLNGLIDFYGKCREVGSSMMVFDTIDKRNDVSWCSLV 251

Query: 899  GGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQR 720
                     +MA  LF    + G   V P    +  VLSACS    +E+G  +  ++  +
Sbjct: 252  AACVQNDEEEMACELFLRARKEG---VEPTDFMVSSVLSACSGLAWLEQGRSVH-AIAVK 307

Query: 719  YGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKI 540
              +E      + +VD++G+ G +E A      MP R  +S W A++G     G   +  +
Sbjct: 308  ACVEGNLFVGSALVDMYGKCGSIEDAKCAFNGMPSRNLIS-WNAMVGGYAHQGHANMALV 366

Query: 539  AADKLFELDPKDSGNHVLLSNMFAA---AGRWEDATVVRKEMK-DVGIKKGA 396
              +++     +   N+V L  + +A   AG  E    + + MK   GI+ GA
Sbjct: 367  LFEEMTVRSHEVKPNYVTLVCVLSACSRAGAVETGMQIFESMKAKYGIEPGA 418


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Vitis vinifera]
          Length = 684

 Score =  856 bits (2212), Expect = 0.0
 Identities = 411/556 (73%), Positives = 474/556 (85%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+Q+H L++K+G  SDVFVGCSAFDMY K GL E+ARK+FDEMPERN+ATWNAY+SNSV 
Sbjct: 127  GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186

Query: 1490 EGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSV 1311
            EGR  +A   F+EFR  G E N IT+CA LN C+    + LGRQ+HGF+++SG + DVSV
Sbjct: 187  EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246

Query: 1310 GNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL 1131
             NGL+DFYGKC ++  +E++FSG+S  N VSWCSM+  Y QNDEEEKAC+ FL +R+EG+
Sbjct: 247  ANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGI 306

Query: 1130 QPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCER 951
            +PTDFM SSVLSACAGL+ LEVG+SVH LAVKACV  N++VGSALVDMYGKCG+IED ER
Sbjct: 307  EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 366

Query: 950  AFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSR 771
            AFDE+PERNL+TWN M+GGYAHQG ADMA+ LF EMT  G H V+PNYVT VCVLSACSR
Sbjct: 367  AFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMT-CGSHRVAPNYVTFVCVLSACSR 425

Query: 770  AGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWG 591
            AG+V  GMEIF SMR RYG+EPGAEHYAC+VDL GRAGMVEQAY+FI  MPIRPTVSVWG
Sbjct: 426  AGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWG 485

Query: 590  ALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDVG 411
            ALLGA +++GK ELGK+AAD LFELDP DSGNHVLLSNMFAAAGRWE+AT+VRKEMKDVG
Sbjct: 486  ALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVG 545

Query: 410  IKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDLX 231
            IKKGAGCSWI+  N VH+FQAKDTSHERNSEIQAML KLR +M+A+GY PDT+FAL+DL 
Sbjct: 546  IKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLE 605

Query: 230  XXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIVR 51
                  EVWYHSEK+AL+FGLISIP GVPIRITKNLR+CGDCHSAIKFIS IV REIIVR
Sbjct: 606  EEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVR 665

Query: 50   DNNRFHRFKDNHCSCR 3
            DNN FHRF+DN CSCR
Sbjct: 666  DNNLFHRFRDNQCSCR 681



 Score =  155 bits (391), Expect = 7e-35
 Identities = 100/381 (26%), Positives = 172/381 (45%)
 Frame = -3

Query: 1598 DMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNSI 1419
            +MY K      A+ +    P R+V TW A I+ SV  GR   A   F   R    + N  
Sbjct: 50   NMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDF 109

Query: 1418 TYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSGM 1239
            T+             ++G+Q+H   +++G   DV VG    D Y K G  E A  +F  M
Sbjct: 110  TFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEM 169

Query: 1238 SLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGR 1059
              RN+ +W + ++        + A  AF+  R EG +P      + L+ACAG + L +GR
Sbjct: 170  PERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGR 229

Query: 1058 SVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQG 879
             +H   +++  + +V V + L+D YGKC  +   E  F  I + N ++W +M+  Y    
Sbjct: 230  QLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQND 289

Query: 878  HADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEPGA 699
              + A  +F    + G   + P    +  VLSAC+    +E G  +  ++  +  +    
Sbjct: 290  EEEKACLVFLRARKEG---IEPTDFMVSSVLSACAGLSVLEVGKSVH-TLAVKACVVGNI 345

Query: 698  EHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADKLFE 519
               + +VD++G+ G +E A      MP R  V+ W A++G     G+ ++     D++  
Sbjct: 346  FVGSALVDMYGKCGSIEDAERAFDEMPERNLVT-WNAMIGGYAHQGQADMAVTLFDEMTC 404

Query: 518  LDPKDSGNHVLLSNMFAAAGR 456
               + + N+V    + +A  R
Sbjct: 405  GSHRVAPNYVTFVCVLSACSR 425



 Score =  129 bits (323), Expect = 5e-27
 Identities = 87/260 (33%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
 Frame = -3

Query: 1424 SITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS--VGNGLVDFYGKCGEIESAEMV 1251
            S+   AV   CS      LGR  H  +I++  D  +   + N LV+ Y K     SA+++
Sbjct: 11   SLVESAVSTQCSR-----LGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLL 64

Query: 1250 FSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGL 1071
             S    R+VV+W +++A   QN     A   F + RR+ +QP DF       A   L   
Sbjct: 65   LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSP 124

Query: 1070 EVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGY 891
             VG+ VHALAVKA    +V+VG +  DMY K G  E+  + FDE+PERN+ TWN  L   
Sbjct: 125  LVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNS 184

Query: 890  AHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGM 711
              +G  D AL  F E    G     PN +T    L+AC+ A  +  G ++   + Q  G 
Sbjct: 185  VLEGRYDDALTAFIEFRHEGW---EPNLITFCAFLNACAGASYLRLGRQLHGFVLQS-GF 240

Query: 710  EPGAEHYACMVDLFGRAGMV 651
            E        ++D +G+   V
Sbjct: 241  EADVSVANGLIDFYGKCHQV 260


>ref|XP_004303188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Fragaria vesca subsp. vesca]
          Length = 684

 Score =  843 bits (2177), Expect = 0.0
 Identities = 408/556 (73%), Positives = 470/556 (84%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+Q+H L++K+G   DVFVGCSAFDMYCKTGL +DA KVFDEMPERN+ATWNAY+SN+V 
Sbjct: 127  GKQVHALAVKAGQICDVFVGCSAFDMYCKTGLGDDAGKVFDEMPERNLATWNAYMSNAVL 186

Query: 1490 EGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSV 1311
            + R   A   FVEF   GGE NSIT+CA LN CSD   + LGRQ+HGF++R G  RDVSV
Sbjct: 187  DRRPVSAVEKFVEFVRAGGEPNSITFCAFLNACSDLSALELGRQLHGFVMRFGFGRDVSV 246

Query: 1310 GNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL 1131
             NGLVDFYGKC ++  A MVF  +   N VSWCSMVA Y QN+EEEKAC  FL +RREG+
Sbjct: 247  MNGLVDFYGKCRDVGLARMVFERIGQANHVSWCSMVAAYVQNNEEEKACELFLRARREGV 306

Query: 1130 QPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCER 951
            +PTDFM SSVLSAC+GLA LE GRS+HALAVKACVD NV+VGSALVDMYGKCG+IED E 
Sbjct: 307  EPTDFMVSSVLSACSGLAWLEQGRSIHALAVKACVDGNVFVGSALVDMYGKCGSIEDAEC 366

Query: 950  AFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSR 771
            AFD +P RNLI+WN M+GGY HQGHA+ ALALF+EM++   HE+ PNYVTLVCVLSACSR
Sbjct: 367  AFDMMPSRNLISWNAMVGGYTHQGHANTALALFEEMSDRS-HELKPNYVTLVCVLSACSR 425

Query: 770  AGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWG 591
            AG V++GM+IF SM+ RYG+EPGAEHYAC+VDL GRAGMVE+AYEFIT MPIRPT+S+WG
Sbjct: 426  AGDVQKGMQIFDSMKSRYGVEPGAEHYACVVDLLGRAGMVERAYEFITKMPIRPTISIWG 485

Query: 590  ALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDVG 411
            ALLGAC++Y KPELGKIAADKLFELDPKDSGNHV+LSN+ AA GRWE+AT+VRKEMKDVG
Sbjct: 486  ALLGACKMYKKPELGKIAADKLFELDPKDSGNHVVLSNLLAATGRWEEATLVRKEMKDVG 545

Query: 410  IKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDLX 231
            IKKGAG SWI+VKN VHIFQAKDTSHE NSEIQAML+ LR  M+ +GY PDTNFAL+DL 
Sbjct: 546  IKKGAGYSWIAVKNAVHIFQAKDTSHEMNSEIQAMLIYLRTKMEEAGYVPDTNFALFDLE 605

Query: 230  XXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIVR 51
                  EVWYHSEK+AL+FGLI+IP G+PIRI KNLR+CGDCH AIKFIS IV+REIIVR
Sbjct: 606  EEEKVSEVWYHSEKIALAFGLIAIPSGLPIRINKNLRICGDCHGAIKFISGIVDREIIVR 665

Query: 50   DNNRFHRFKDNHCSCR 3
            DNNRFHRF++ HCSCR
Sbjct: 666  DNNRFHRFREGHCSCR 681



 Score =  147 bits (370), Expect = 2e-32
 Identities = 103/391 (26%), Positives = 171/391 (43%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+     +MY K  L   A+ +    P R+V TW A I+  V       A   F+  R  
Sbjct: 43   FLSNHLINMYSKLDLPNSAQLLLHLTPSRSVVTWTALIAGLVQNRHFASALLNFINMRRD 102

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
                N  T+             V+G+Q+H   +++G   DV VG    D Y K G  + A
Sbjct: 103  SVVPNDFTFPCAFKASGLLRRPVIGKQVHALAVKAGQICDVFVGCSAFDMYCKTGLGDDA 162

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              VF  M  RN+ +W + ++    +     A   F+   R G +P      + L+AC+ L
Sbjct: 163  GKVFDEMPERNLATWNAYMSNAVLDRRPVSAVEKFVEFVRAGGEPNSITFCAFLNACSDL 222

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTML 900
            + LE+GR +H   ++     +V V + LVD YGKC ++      F+ I + N ++W +M+
Sbjct: 223  SALELGRQLHGFVMRFGFGRDVSVMNGLVDFYGKCRDVGLARMVFERIGQANHVSWCSMV 282

Query: 899  GGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQR 720
              Y      + A  LF      G   V P    +  VLSACS    +E+G  I  ++  +
Sbjct: 283  AAYVQNNEEEKACELFLRARREG---VEPTDFMVSSVLSACSGLAWLEQGRSIH-ALAVK 338

Query: 719  YGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKI 540
              ++      + +VD++G+ G +E A     +MP R  +S W A++G     G       
Sbjct: 339  ACVDGNVFVGSALVDMYGKCGSIEDAECAFDMMPSRNLIS-WNAMVGGYTHQGHANTALA 397

Query: 539  AADKLFELDPKDSGNHVLLSNMFAAAGRWED 447
              +++ +   +   N+V L  + +A  R  D
Sbjct: 398  LFEEMSDRSHELKPNYVTLVCVLSACSRAGD 428


>ref|XP_006419949.1| hypothetical protein CICLE_v10006593mg [Citrus clementina]
            gi|557521822|gb|ESR33189.1| hypothetical protein
            CICLE_v10006593mg [Citrus clementina]
          Length = 686

 Score =  834 bits (2154), Expect = 0.0
 Identities = 404/556 (72%), Positives = 470/556 (84%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+QLH L+LKSG   DVFVGCSAFDMY KTGL++DA K+FDEMPERN+ATWNAYISN+V
Sbjct: 128  TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 187

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
              GR + A   F+  R  GGE + IT+CA LN CSD   + LGRQ+HGFL+RSG D +VS
Sbjct: 188  LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCLLLQLGRQLHGFLVRSGFDGNVS 247

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGLVDFYGKC E+  A+ VF G+  +N VSWCSM+AVY QN EEE  C  FL++RREG
Sbjct: 248  VCNGLVDFYGKCNEVGLAKAVFDGIIDKNDVSWCSMLAVYVQNYEEENGCRMFLTARREG 307

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++P DFM SSVLSACA +AGLE+GRSVHA+AVKACV+ N++VGSALVDMYGKCG+IED E
Sbjct: 308  VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIEDAE 367

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
             AF+++PERNL+ WN ++GGYAHQGHADMAL+ F+EMT      V PNYVTLVCVLSACS
Sbjct: 368  IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 426

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE+GMEIF+SM  +YG++PGAEHYAC+VDL GRAG+V++AYE I  MP+RPT+SVW
Sbjct: 427  RAGAVEKGMEIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 486

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GALL ACRVYGKPELG+IAAD LF+LDP DSGNHVLLSNMFAA GRWE+A +VRKEMKDV
Sbjct: 487  GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 546

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAGCSWISVKN +HIFQAKDTSHERN+EIQAML KLR +MKA+GY PDTNFALYD+
Sbjct: 547  GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 606

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EV +HSEK+AL+FGLI+IPPGVPIRITKNLR+CGDCHSA KFIS IV RE+IV
Sbjct: 607  EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 666

Query: 53   RDNNRFHRFKDNHCSC 6
            RDNNRFHRF D +CSC
Sbjct: 667  RDNNRFHRFWDGYCSC 682



 Score =  157 bits (396), Expect = 2e-35
 Identities = 117/410 (28%), Positives = 185/410 (45%), Gaps = 9/410 (2%)
 Frame = -3

Query: 1598 DMYCKTGLREDARKVFDEMP--ERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGN 1425
            +MY K  L   A+ V    P   R V +W A IS  V  G    AF  F   R+     N
Sbjct: 50   NMYSKLDLPNPAQLVLQLTPVRSRTVVSWTALISGLVQNGHFTSAFLHFTNMRLECISPN 109

Query: 1424 SITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFS 1245
              T+  +    S     V G+Q+H   ++SG   DV VG    D Y K G  + A+ +F 
Sbjct: 110  DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 169

Query: 1244 GMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEV 1065
             M  RN+ +W + ++        + A  AF++ RR G +P      + L+AC+    L++
Sbjct: 170  EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCLLLQL 229

Query: 1064 GRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAH 885
            GR +H   V++  D NV V + LVD YGKC  +   +  FD I ++N ++W +ML  Y  
Sbjct: 230  GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKAVFDGIIDKNDVSWCSMLAVYVQ 289

Query: 884  QGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEP 705
                +    +F      G   V P    +  VLSAC+R   +E G  +  ++  +  +E 
Sbjct: 290  NYEEENGCRMFLTARREG---VEPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEG 345

Query: 704  GAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADKL 525
                 + +VD++G+ G +E A      MP R  V  W A++G     G  ++   + +++
Sbjct: 346  NIFVGSALVDMYGKCGSIEDAEIAFNKMPERNLV-CWNAIIGGYAHQGHADMALSSFEEM 404

Query: 524  FELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMK-------DVGIKKGA 396
              +  +   N+V L  + +A  R   A  V K M+         GIK GA
Sbjct: 405  TSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMEIFYSMTLKYGIKPGA 451


>ref|XP_006489403.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            isoform X1 [Citrus sinensis]
            gi|568872496|ref|XP_006489404.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g14850-like isoform X2 [Citrus sinensis]
          Length = 686

 Score =  832 bits (2150), Expect = 0.0
 Identities = 403/556 (72%), Positives = 470/556 (84%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+QLH L+LKSG   DVFVGCSAFDMY KTGL++DA K+FDEMPERN+ATWNAYISN+V
Sbjct: 128  TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 187

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
              GR + A   F+  R  GGE + IT+CA LN CSD   + LGRQ+HGFL+RSG D +VS
Sbjct: 188  LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCLLLQLGRQLHGFLVRSGFDGNVS 247

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGLVDFYGKC E+  A+ VF G+  +N VSWCSM+AVY QN EEE  C  FL++RREG
Sbjct: 248  VCNGLVDFYGKCNEVGLAKAVFDGIIDKNDVSWCSMLAVYVQNYEEENGCRMFLTARREG 307

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++P DFM SSVLSACA +AGLE+GRSVHA+AVKACV+ N++VGSALVDMYGKCG+IED E
Sbjct: 308  VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIEDAE 367

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
             AF+++PERNL+ WN ++GGYAHQGHADMAL+ F+EMT      V PNYVTLVCVLSACS
Sbjct: 368  IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 426

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE+GM+IF+SM  +YG++PGAEHYAC+VDL GRAG+V++AYE I  MP+RPT+SVW
Sbjct: 427  RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 486

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GALL ACRVYGKPELG+IAAD LF+LDP DSGNHVLLSNMFAA GRWE+A +VRKEMKDV
Sbjct: 487  GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 546

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAGCSWISVKN +HIFQAKDTSHERN+EIQAML KLR +MKA+GY PDTNFALYD+
Sbjct: 547  GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 606

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EV +HSEK+AL+FGLI+IPPGVPIRITKNLR+CGDCHSA KFIS IV RE+IV
Sbjct: 607  EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 666

Query: 53   RDNNRFHRFKDNHCSC 6
            RDNNRFHRF D +CSC
Sbjct: 667  RDNNRFHRFWDGYCSC 682



 Score =  158 bits (399), Expect = 8e-36
 Identities = 118/410 (28%), Positives = 185/410 (45%), Gaps = 9/410 (2%)
 Frame = -3

Query: 1598 DMYCKTGLREDARKVFDEMP--ERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGN 1425
            +MY K  L   A+ V    P   R V +W A IS  V  G    AF  F   R+     N
Sbjct: 50   NMYSKFDLPNPAQLVLQLTPVRSRTVVSWTALISGLVQNGHFTSAFLHFTNMRLECISPN 109

Query: 1424 SITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFS 1245
              T+  +    S     V G+Q+H   ++SG   DV VG    D Y K G  + A+ +F 
Sbjct: 110  DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 169

Query: 1244 GMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEV 1065
             M  RN+ +W + ++        + A  AF++ RR G +P      + L+AC+    L++
Sbjct: 170  EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCLLLQL 229

Query: 1064 GRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAH 885
            GR +H   V++  D NV V + LVD YGKC  +   +  FD I ++N ++W +ML  Y  
Sbjct: 230  GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKAVFDGIIDKNDVSWCSMLAVYVQ 289

Query: 884  QGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEP 705
                +    +F      G   V P    +  VLSAC+R   +E G  +  ++  +  +E 
Sbjct: 290  NYEEENGCRMFLTARREG---VEPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEG 345

Query: 704  GAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADKL 525
                 + +VD++G+ G +E A      MP R  V  W A++G     G  ++   + +++
Sbjct: 346  NIFVGSALVDMYGKCGSIEDAEIAFNKMPERNLV-CWNAIIGGYAHQGHADMALSSFEEM 404

Query: 524  FELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMK-------DVGIKKGA 396
              +  +   N+V L  + +A  R   A  V K MK         GIK GA
Sbjct: 405  TSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMKIFYSMTLKYGIKPGA 451


>ref|XP_002314694.1| hypothetical protein POPTR_0010s09690g [Populus trichocarpa]
            gi|222863734|gb|EEF00865.1| hypothetical protein
            POPTR_0010s09690g [Populus trichocarpa]
          Length = 631

 Score =  826 bits (2134), Expect = 0.0
 Identities = 392/556 (70%), Positives = 468/556 (84%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+Q+H ++LK G  +D FVGCSAFDMY KTGL+ +A+++FDEMP RNVA WNAYISN+V 
Sbjct: 77   GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136

Query: 1490 EGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSV 1311
            +GR  +A   F+EFR +GGE + IT+CA LN C+D   + LGRQ+HG +IRSG + DVSV
Sbjct: 137  DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196

Query: 1310 GNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL 1131
             NG++D YGKC E+E AEMVF+GM  RN VSWC+MVA  +QNDE+EKACV FL  R+EG+
Sbjct: 197  ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256

Query: 1130 QPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCER 951
            + TD+M SSV+SA AG++GLE GRSVHALAVKACV+ +++VGSALVDMYGKCG+IEDCE+
Sbjct: 257  ELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQ 316

Query: 950  AFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSR 771
             F E+PERNL++WN M+ GYAHQG  DMA+ LF+EM      E   NYVTL+CVLSACSR
Sbjct: 317  VFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQS----EAVANYVTLICVLSACSR 372

Query: 770  AGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWG 591
             GAV+ G EIF SMR RY +EPGAEHYAC+ D+ GRAGMVE+AYEF+  MPIRPT+SVWG
Sbjct: 373  GGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWG 432

Query: 590  ALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDVG 411
            ALL ACRVYG+PELGKIAAD LF+LDPKDSGNHVLLSNMFAAAGRW++AT+VRKEMKDVG
Sbjct: 433  ALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVG 492

Query: 410  IKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDLX 231
            IKKGAGCSW++ KN VH+FQAKDTSHERNSEIQAML+KLR +M+A+GY PDTN+ALYDL 
Sbjct: 493  IKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLE 552

Query: 230  XXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIVR 51
                  EV YHSEK+AL+FGLI++PPGVPIRITKNLR+CGDCHSA KFIS IV REIIVR
Sbjct: 553  EEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVR 612

Query: 50   DNNRFHRFKDNHCSCR 3
            DNNRFHRF+D+ CSCR
Sbjct: 613  DNNRFHRFRDSQCSCR 628



 Score =  102 bits (253), Expect = 7e-19
 Identities = 68/239 (28%), Positives = 109/239 (45%)
 Frame = -3

Query: 1289 YGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMA 1110
            Y K      A+++      R VV+W ++++   QN     A + F   RRE ++P DF  
Sbjct: 2    YSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTF 61

Query: 1109 SSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPE 930
                 A   L     G+ +HA+A+K     + +VG +  DMY K G   + +R FDE+P 
Sbjct: 62   PCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPP 121

Query: 929  RNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEG 750
            RN+  WN  +      G    A+  F E    GG    P+ +T    L+AC+ A  ++ G
Sbjct: 122  RNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGG---EPDLITFCAFLNACADARCLDLG 178

Query: 749  MEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGAC 573
             ++   +  R G E        ++D++G+   VE A      M  R +VS W  ++ AC
Sbjct: 179  RQLH-GLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVS-WCTMVAAC 235


>gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis]
          Length = 678

 Score =  823 bits (2127), Expect = 0.0
 Identities = 400/556 (71%), Positives = 459/556 (82%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+Q+H ++ K G   DVFVGC AFDMYCKTGL +DA KVFDEMPERN  TWNAYISN+V 
Sbjct: 121  GRQVHAVAFKIGQIHDVFVGCGAFDMYCKTGLWDDACKVFDEMPERNSTTWNAYISNAVL 180

Query: 1490 EGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSV 1311
             GR       F+EF  +GGE +SIT+C+ LN CSD  D+ LGRQ+HGF+IR G  + V V
Sbjct: 181  SGRPIYGIKKFIEFLRVGGEPDSITFCSFLNACSDMSDLELGRQLHGFVIRCGYGKYVKV 240

Query: 1310 GNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL 1131
             NGL+DFYGKC E+ES+EMVF  + LRN VSWCSM+AVY QNDEEE AC  FL +R+EGL
Sbjct: 241  MNGLIDFYGKCQEVESSEMVFDRIHLRNDVSWCSMMAVYVQNDEEENACEVFLKARKEGL 300

Query: 1130 QPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCER 951
             P DFM S+ LSACAGL+  ++GRS H LAVKACV+ N++VGSALVDMYGKCG+I D ER
Sbjct: 301  VPNDFMISTFLSACAGLSDFDLGRSGHTLAVKACVEGNIFVGSALVDMYGKCGSINDAER 360

Query: 950  AFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSR 771
             F+E+P RN ITWN M+ GYAHQGHADMALAL ++MT     EV PNYVTLV +LSACS+
Sbjct: 361  EFNEMPHRNSITWNAMINGYAHQGHADMALALCEKMTSSNC-EVLPNYVTLVSILSACSK 419

Query: 770  AGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWG 591
            AGAVE+GMEIF SMR RYG+EPG EHYAC+VDL GRAG+VE+AYEFI  MPI PT SVWG
Sbjct: 420  AGAVEKGMEIFESMRARYGVEPGVEHYACVVDLLGRAGLVERAYEFIKKMPILPTTSVWG 479

Query: 590  ALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDVG 411
            ALLGAC++Y K ELG+IAAD LF+LDPKDSGNHV+LSNMFAAAGRWE+AT+VRKEMKDVG
Sbjct: 480  ALLGACKMYRKSELGEIAADNLFKLDPKDSGNHVVLSNMFAAAGRWEEATLVRKEMKDVG 539

Query: 410  IKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDLX 231
            IKKGAG SWI+VKN VHIFQAKDTSHERNSEIQ ML KLRR +K +GY PDTN+AL+DL 
Sbjct: 540  IKKGAGYSWITVKNTVHIFQAKDTSHERNSEIQEMLTKLRRMVKEAGYFPDTNYALFDLE 599

Query: 230  XXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIVR 51
                  EVWYHSEKLAL+FGL++IPPGVPIRITKNLR+CGDCHSAIKFIS IV REIIVR
Sbjct: 600  EEEKTSEVWYHSEKLALAFGLVAIPPGVPIRITKNLRICGDCHSAIKFISGIVGREIIVR 659

Query: 50   DNNRFHRFKDNHCSCR 3
            DNNRFH+FKD  CSCR
Sbjct: 660  DNNRFHQFKDGKCSCR 675



 Score =  147 bits (372), Expect = 1e-32
 Identities = 103/392 (26%), Positives = 176/392 (44%)
 Frame = -3

Query: 1595 MYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNSIT 1416
            MY K  L + A+ V    P R+V TW++ I+  V  G    A   F   R+   + N  T
Sbjct: 45   MYSKLDLPDSAQLVLSLTPSRSVVTWSSLIAGCVHNGHFASALHHFSGMRLDCIQPNDFT 104

Query: 1415 YCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSGMS 1236
            +  +    +  G   +GRQ+H    + G   DV VG G  D Y K G  + A  VF  M 
Sbjct: 105  FPCIFKASASLGMSFVGRQVHAVAFKIGQIHDVFVGCGAFDMYCKTGLWDDACKVFDEMP 164

Query: 1235 LRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRS 1056
             RN  +W + ++    +         F+   R G +P      S L+AC+ ++ LE+GR 
Sbjct: 165  ERNSTTWNAYISNAVLSGRPIYGIKKFIEFLRVGGEPDSITFCSFLNACSDMSDLELGRQ 224

Query: 1055 VHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGH 876
            +H   ++    + V V + L+D YGKC  +E  E  FD I  RN ++W +M+  Y     
Sbjct: 225  LHGFVIRCGYGKYVKVMNGLIDFYGKCQEVESSEMVFDRIHLRNDVSWCSMMAVYVQNDE 284

Query: 875  ADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEPGAE 696
             + A  +F +  + G   + PN   +   LSAC+     + G     ++  +  +E    
Sbjct: 285  EENACEVFLKARKEG---LVPNDFMISTFLSACAGLSDFDLGRS-GHTLAVKACVEGNIF 340

Query: 695  HYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADKLFEL 516
              + +VD++G+ G +  A      MP R +++ W A++      G  ++     +K+   
Sbjct: 341  VGSALVDMYGKCGSINDAEREFNEMPHRNSIT-WNAMINGYAHQGHADMALALCEKMTSS 399

Query: 515  DPKDSGNHVLLSNMFAAAGRWEDATVVRKEMK 420
            + +   N+V L ++ +A  +   A  V K M+
Sbjct: 400  NCEVLPNYVTLVSILSACSK---AGAVEKGME 428



 Score =  114 bits (286), Expect = 1e-22
 Identities = 84/265 (31%), Positives = 125/265 (47%), Gaps = 2/265 (0%)
 Frame = -3

Query: 1370 LGRQIHGFLIRS-GCDRDVSVGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVY 1194
            LGR +H  +IR+ G      + N LV  Y K    +SA++V S    R+VV+W S++A  
Sbjct: 18   LGRVVHAQIIRNLGSSLPAFLCNHLVHMYSKLDLPDSAQLVLSLTPSRSVVTWSSLIAGC 77

Query: 1193 QQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENV 1014
              N     A   F   R + +QP DF    +  A A L    VGR VHA+A K     +V
Sbjct: 78   VHNGHFASALHHFSGMRLDCIQPNDFTFPCIFKASASLGMSFVGRQVHAVAFKIGQIHDV 137

Query: 1013 YVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEG 834
            +VG    DMY K G  +D  + FDE+PERN  TWN  +      G     +  F E    
Sbjct: 138  FVGCGAFDMYCKTGLWDDACKVFDEMPERNSTTWNAYISNAVLSGRPIYGIKKFIEFLRV 197

Query: 833  GGHEVSPNYVTLVCVLSACSRAGAVEEGMEIF-WSMRQRYGMEPGAEHYACMVDLFGRAG 657
            GG    P+ +T    L+ACS    +E G ++  + +R  YG     +    ++D +G+  
Sbjct: 198  GG---EPDSITFCSFLNACSDMSDLELGRQLHGFVIRCGYGKY--VKVMNGLIDFYGKCQ 252

Query: 656  MVEQAYEFITVMPIRPTVSVWGALL 582
             VE +      + +R  VS W +++
Sbjct: 253  EVESSEMVFDRIHLRNDVS-WCSMM 276


>ref|XP_007034774.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 3
            [Theobroma cacao] gi|508713803|gb|EOY05700.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 3 [Theobroma cacao]
          Length = 683

 Score =  814 bits (2102), Expect = 0.0
 Identities = 395/556 (71%), Positives = 462/556 (83%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+QLH L+LKS    D FVGCS FDMY KTGLR +AR +FDEMP+R+VA WNA ISN+V 
Sbjct: 129  GKQLHALALKSAQIFDSFVGCSCFDMYLKTGLRGEARNMFDEMPDRSVAMWNANISNAVL 188

Query: 1490 EGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSV 1311
            +G+   A   F++FR +GGE + IT+C  LN CSD   + LGRQ+HG +IRSG D ++SV
Sbjct: 189  DGKPSIAVDVFIKFRRVGGEPDPITFCVFLNACSDAFYLELGRQLHGCVIRSGFDGNLSV 248

Query: 1310 GNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL 1131
             NGLVDFYGKC E+ESA+MVF GM  RN VSWCS+V+ Y+QN EEE AC  FL++R+EG+
Sbjct: 249  CNGLVDFYGKCKEVESAKMVFDGMEKRNAVSWCSLVSAYEQNYEEENACEVFLAARKEGV 308

Query: 1130 QPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCER 951
            +PTDFM SSV+SACAG++GLE GRSVH LAVKACV  NV+VGSAL+DMYGKCG+I+D E+
Sbjct: 309  EPTDFMVSSVISACAGMSGLEFGRSVHGLAVKACVKGNVFVGSALIDMYGKCGSIKDAEQ 368

Query: 950  AFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSR 771
            AF E+PERNL+TWN M+GGYAHQG ADMALALF++M   G   V PNYVTLVCVLSACSR
Sbjct: 369  AFHEMPERNLVTWNAMIGGYAHQGCADMALALFQDMMSCG---VVPNYVTLVCVLSACSR 425

Query: 770  AGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWG 591
             GAV+ G++IF SM +R+ +EPGAEHYAC+VDL GRAGMVE+AY+FI  MPI PT+SVWG
Sbjct: 426  GGAVKLGVKIFESMNERFHIEPGAEHYACVVDLLGRAGMVERAYDFIKKMPIAPTISVWG 485

Query: 590  ALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDVG 411
            ALL ACRVY KPELG+IAA KLFELDPKDSGNHVLLSN+FA+ GRWE+A +VRKEMKDVG
Sbjct: 486  ALLNACRVYKKPELGRIAAYKLFELDPKDSGNHVLLSNLFASTGRWEEADLVRKEMKDVG 545

Query: 410  IKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDLX 231
            IKKGAGCSWI+VKN VH FQAKDTSHE NS+IQ ML KLRR+MK++GY  DTNFALYDL 
Sbjct: 546  IKKGAGCSWITVKNEVHTFQAKDTSHEMNSKIQEMLAKLRREMKSAGYIADTNFALYDLE 605

Query: 230  XXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIVR 51
                  EV YHSEK+AL+FGLI IPPGVPIRITKNLR+CGDCHSA KF+S IV REIIVR
Sbjct: 606  EEEKISEVGYHSEKIALAFGLIVIPPGVPIRITKNLRICGDCHSAFKFMSGIVGREIIVR 665

Query: 50   DNNRFHRFKDNHCSCR 3
            DNNRFHRF+D  CSCR
Sbjct: 666  DNNRFHRFRDGQCSCR 681



 Score =  133 bits (335), Expect = 2e-28
 Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 2/349 (0%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMP--ERNVATWNAYISNSVFEGRTREAFCTFVEFR 1446
            F+     +MY K  L   A  V  + P   R+V TW A IS  V  G    A   F   R
Sbjct: 43   FLSNHLINMYSKFNLPNSAHLVLLQTPPESRSVVTWTALISGHVQNGHFASALIHFSHMR 102

Query: 1445 VLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIE 1266
                  N  T+       +     V+G+Q+H   ++S    D  VG    D Y K G   
Sbjct: 103  KDLISPNDFTFPCAFKASAALRSPVVGKQLHALALKSAQIFDSFVGCSCFDMYLKTGLRG 162

Query: 1265 SAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACA 1086
             A  +F  M  R+V  W + ++    + +   A   F+  RR G +P        L+AC+
Sbjct: 163  EARNMFDEMPDRSVAMWNANISNAVLDGKPSIAVDVFIKFRRVGGEPDPITFCVFLNACS 222

Query: 1085 GLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNT 906
                LE+GR +H   +++  D N+ V + LVD YGKC  +E  +  FD + +RN ++W +
Sbjct: 223  DAFYLELGRQLHGCVIRSGFDGNLSVCNGLVDFYGKCKEVESAKMVFDGMEKRNAVSWCS 282

Query: 905  MLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMR 726
            ++  Y      + A  +F    + G   V P    +  V+SAC+    +E G  +   + 
Sbjct: 283  LVSAYEQNYEEENACEVFLAARKEG---VEPTDFMVSSVISACAGMSGLEFGRSVH-GLA 338

Query: 725  QRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLG 579
             +  ++      + ++D++G+ G ++ A +    MP R  V+ W A++G
Sbjct: 339  VKACVKGNVFVGSALIDMYGKCGSIKDAEQAFHEMPERNLVT-WNAMIG 386


>ref|XP_007034772.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
            [Theobroma cacao] gi|590658165|ref|XP_007034773.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 1 [Theobroma cacao]
            gi|590658172|ref|XP_007034775.1| Pentatricopeptide repeat
            (PPR) superfamily protein isoform 1 [Theobroma cacao]
            gi|508713801|gb|EOY05698.1| Pentatricopeptide repeat
            (PPR) superfamily protein isoform 1 [Theobroma cacao]
            gi|508713802|gb|EOY05699.1| Pentatricopeptide repeat
            (PPR) superfamily protein isoform 1 [Theobroma cacao]
            gi|508713804|gb|EOY05701.1| Pentatricopeptide repeat
            (PPR) superfamily protein isoform 1 [Theobroma cacao]
          Length = 684

 Score =  814 bits (2102), Expect = 0.0
 Identities = 395/556 (71%), Positives = 462/556 (83%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+QLH L+LKS    D FVGCS FDMY KTGLR +AR +FDEMP+R+VA WNA ISN+V 
Sbjct: 129  GKQLHALALKSAQIFDSFVGCSCFDMYLKTGLRGEARNMFDEMPDRSVAMWNANISNAVL 188

Query: 1490 EGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSV 1311
            +G+   A   F++FR +GGE + IT+C  LN CSD   + LGRQ+HG +IRSG D ++SV
Sbjct: 189  DGKPSIAVDVFIKFRRVGGEPDPITFCVFLNACSDAFYLELGRQLHGCVIRSGFDGNLSV 248

Query: 1310 GNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL 1131
             NGLVDFYGKC E+ESA+MVF GM  RN VSWCS+V+ Y+QN EEE AC  FL++R+EG+
Sbjct: 249  CNGLVDFYGKCKEVESAKMVFDGMEKRNAVSWCSLVSAYEQNYEEENACEVFLAARKEGV 308

Query: 1130 QPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCER 951
            +PTDFM SSV+SACAG++GLE GRSVH LAVKACV  NV+VGSAL+DMYGKCG+I+D E+
Sbjct: 309  EPTDFMVSSVISACAGMSGLEFGRSVHGLAVKACVKGNVFVGSALIDMYGKCGSIKDAEQ 368

Query: 950  AFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSR 771
            AF E+PERNL+TWN M+GGYAHQG ADMALALF++M   G   V PNYVTLVCVLSACSR
Sbjct: 369  AFHEMPERNLVTWNAMIGGYAHQGCADMALALFQDMMSCG---VVPNYVTLVCVLSACSR 425

Query: 770  AGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWG 591
             GAV+ G++IF SM +R+ +EPGAEHYAC+VDL GRAGMVE+AY+FI  MPI PT+SVWG
Sbjct: 426  GGAVKLGVKIFESMNERFHIEPGAEHYACVVDLLGRAGMVERAYDFIKKMPIAPTISVWG 485

Query: 590  ALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDVG 411
            ALL ACRVY KPELG+IAA KLFELDPKDSGNHVLLSN+FA+ GRWE+A +VRKEMKDVG
Sbjct: 486  ALLNACRVYKKPELGRIAAYKLFELDPKDSGNHVLLSNLFASTGRWEEADLVRKEMKDVG 545

Query: 410  IKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDLX 231
            IKKGAGCSWI+VKN VH FQAKDTSHE NS+IQ ML KLRR+MK++GY  DTNFALYDL 
Sbjct: 546  IKKGAGCSWITVKNEVHTFQAKDTSHEMNSKIQEMLAKLRREMKSAGYIADTNFALYDLE 605

Query: 230  XXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIVR 51
                  EV YHSEK+AL+FGLI IPPGVPIRITKNLR+CGDCHSA KF+S IV REIIVR
Sbjct: 606  EEEKISEVGYHSEKIALAFGLIVIPPGVPIRITKNLRICGDCHSAFKFMSGIVGREIIVR 665

Query: 50   DNNRFHRFKDNHCSCR 3
            DNNRFHRF+D  CSCR
Sbjct: 666  DNNRFHRFRDGQCSCR 681



 Score =  133 bits (335), Expect = 2e-28
 Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 2/349 (0%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMP--ERNVATWNAYISNSVFEGRTREAFCTFVEFR 1446
            F+     +MY K  L   A  V  + P   R+V TW A IS  V  G    A   F   R
Sbjct: 43   FLSNHLINMYSKFNLPNSAHLVLLQTPPESRSVVTWTALISGHVQNGHFASALIHFSHMR 102

Query: 1445 VLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIE 1266
                  N  T+       +     V+G+Q+H   ++S    D  VG    D Y K G   
Sbjct: 103  KDLISPNDFTFPCAFKASAALRSPVVGKQLHALALKSAQIFDSFVGCSCFDMYLKTGLRG 162

Query: 1265 SAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACA 1086
             A  +F  M  R+V  W + ++    + +   A   F+  RR G +P        L+AC+
Sbjct: 163  EARNMFDEMPDRSVAMWNANISNAVLDGKPSIAVDVFIKFRRVGGEPDPITFCVFLNACS 222

Query: 1085 GLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNT 906
                LE+GR +H   +++  D N+ V + LVD YGKC  +E  +  FD + +RN ++W +
Sbjct: 223  DAFYLELGRQLHGCVIRSGFDGNLSVCNGLVDFYGKCKEVESAKMVFDGMEKRNAVSWCS 282

Query: 905  MLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMR 726
            ++  Y      + A  +F    + G   V P    +  V+SAC+    +E G  +   + 
Sbjct: 283  LVSAYEQNYEEENACEVFLAARKEG---VEPTDFMVSSVISACAGMSGLEFGRSVH-GLA 338

Query: 725  QRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLG 579
             +  ++      + ++D++G+ G ++ A +    MP R  V+ W A++G
Sbjct: 339  VKACVKGNVFVGSALIDMYGKCGSIKDAEQAFHEMPERNLVT-WNAMIG 386


>ref|XP_006340539.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Solanum tuberosum]
          Length = 687

 Score =  801 bits (2070), Expect = 0.0
 Identities = 389/557 (69%), Positives = 463/557 (83%), Gaps = 1/557 (0%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            GQQLH L+LK    +DVFVGCSAFDMYCK GLRE A+K+FDEMP RN+ATWNA ISNSV 
Sbjct: 129  GQQLHALALKGSFINDVFVGCSAFDMYCKNGLREYAQKMFDEMPHRNIATWNACISNSVL 188

Query: 1490 EGRTREAFCTFVEFRVLGGEG-NSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
            +GR  +A   FVE   LG E  NSIT+C  LN CSD   + LG+Q+HG++IR G   DVS
Sbjct: 189  DGRPYDASLKFVELLRLGEEPPNSITFCVFLNACSDGLYLKLGQQLHGYVIRFGFGSDVS 248

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NG+VDFYGKC +++ +E+VF+ +++RN VSWC+M+AVY+QND  + A + FL +R+EG
Sbjct: 249  VLNGMVDFYGKCHQVKYSELVFNEINVRNGVSWCTMLAVYEQNDIWDNAFMLFLKARKEG 308

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++PT+FM SSVLSACAG+A LE+GRS+H LAVKAC++ NV+VGSALVDMYGKCG+I++CE
Sbjct: 309  IKPTEFMLSSVLSACAGMAVLELGRSIHGLAVKACIEHNVFVGSALVDMYGKCGSIDNCE 368

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
             +F E+PERNLITWN ++GGYAHQG ADMAL+LF+EMT    H V P+YVT VCVL+ACS
Sbjct: 369  SSFYEMPERNLITWNAVMGGYAHQGCADMALSLFEEMTSES-HNVVPSYVTFVCVLTACS 427

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAV+ GM+IF SM+++YG+EPG EHYAC+VD+ GRAG+VE+AY+FI  MP+ PTVSVW
Sbjct: 428  RAGAVKIGMDIFESMQKKYGIEPGPEHYACVVDILGRAGLVERAYDFIKKMPVPPTVSVW 487

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GALLGACRV+GKPELGK+AAD LF LDP DSGNHV+LSNMFAAAGRW++A +VRKEMKDV
Sbjct: 488  GALLGACRVHGKPELGKVAADNLFRLDPLDSGNHVILSNMFAAAGRWDEANLVRKEMKDV 547

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GI KGAG SWIS KN +HIFQAKDT+HER  EIQAML KLRRDMKA GY  DTN ALYDL
Sbjct: 548  GITKGAGISWISAKNSIHIFQAKDTTHERYPEIQAMLAKLRRDMKAEGYIADTNSALYDL 607

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EVW+HSEK+AL+FGLI+IPPGVPIRITKNLRVC DCHSAIKFIS I  REIIV
Sbjct: 608  EEEEKESEVWHHSEKIALAFGLIAIPPGVPIRITKNLRVCVDCHSAIKFISGITGREIIV 667

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFH FKD  CSCR
Sbjct: 668  RDNNRFHSFKDYQCSCR 684



 Score =  131 bits (329), Expect = 1e-27
 Identities = 102/380 (26%), Positives = 170/380 (44%), Gaps = 3/380 (0%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPER--NVATWNAYISNSVFEGRTREAFCTFVEFR 1446
            F+     + Y K      A+ +    P R  +V TW A I+ SV  G    A   F + R
Sbjct: 43   FLSNHLINFYSKLDSPNSAQLLLSLTPPRFRSVVTWTALIAGSVQNGHFTSALLHFSDMR 102

Query: 1445 VLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIE 1266
                + N  T+  +    +     ++G+Q+H   ++     DV VG    D Y K G  E
Sbjct: 103  RQSVQPNDFTFPCLFKASAFLHYPLMGQQLHALALKGSFINDVFVGCSAFDMYCKNGLRE 162

Query: 1265 SAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSV-LSAC 1089
             A+ +F  M  RN+ +W + ++    +     A + F+   R G +P + +   V L+AC
Sbjct: 163  YAQKMFDEMPHRNIATWNACISNSVLDGRPYDASLKFVELLRLGEEPPNSITFCVFLNAC 222

Query: 1088 AGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWN 909
            +    L++G+ +H   ++     +V V + +VD YGKC  ++  E  F+EI  RN ++W 
Sbjct: 223  SDGLYLKLGQQLHGYVIRFGFGSDVSVLNGMVDFYGKCHQVKYSELVFNEINVRNGVSWC 282

Query: 908  TMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSM 729
            TML  Y      D A  LF +  + G   + P    L  VLSAC+    +E G  I   +
Sbjct: 283  TMLAVYEQNDIWDNAFMLFLKARKEG---IKPTEFMLSSVLSACAGMAVLELGRSIH-GL 338

Query: 728  RQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPEL 549
              +  +E      + +VD++G+ G ++        MP R  ++ W A++G     G  ++
Sbjct: 339  AVKACIEHNVFVGSALVDMYGKCGSIDNCESSFYEMPERNLIT-WNAVMGGYAHQGCADM 397

Query: 548  GKIAADKLFELDPKDSGNHV 489
                A  LFE    +S N V
Sbjct: 398  ----ALSLFEEMTSESHNVV 413



 Score =  115 bits (289), Expect = 5e-23
 Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 3/278 (1%)
 Frame = -3

Query: 1406 VLNGCSDTGDVVLGRQIHGFLIRS-GCDRDVSVGNGLVDFYGKCGEIESAEMVFS--GMS 1236
            ++     T  ++LGR +H  +IR+        + N L++FY K     SA+++ S     
Sbjct: 12   LIESALSTQSLLLGRAVHAHIIRTIESPFPPFLSNHLINFYSKLDSPNSAQLLLSLTPPR 71

Query: 1235 LRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRS 1056
             R+VV+W +++A   QN     A + F   RR+ +QP DF    +  A A L    +G+ 
Sbjct: 72   FRSVVTWTALIAGSVQNGHFTSALLHFSDMRRQSVQPNDFTFPCLFKASAFLHYPLMGQQ 131

Query: 1055 VHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGH 876
            +HALA+K     +V+VG +  DMY K G  E  ++ FDE+P RN+ TWN  +      G 
Sbjct: 132  LHALALKGSFINDVFVGCSAFDMYCKNGLREYAQKMFDEMPHRNIATWNACISNSVLDGR 191

Query: 875  ADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEPGAE 696
               A   F E+   G  E  PN +T    L+ACS    ++ G ++   +  R+G      
Sbjct: 192  PYDASLKFVELLRLG--EEPPNSITFCVFLNACSDGLYLKLGQQLHGYV-IRFGFGSDVS 248

Query: 695  HYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALL 582
                MVD +G+   V+ +      + +R  VS W  +L
Sbjct: 249  VLNGMVDFYGKCHQVKYSELVFNEINVRNGVS-WCTML 285


>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355518476|gb|AET00100.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  798 bits (2062), Expect = 0.0
 Identities = 385/558 (68%), Positives = 462/558 (82%), Gaps = 1/558 (0%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+HGL+LK G+  DVFVGCS FDMYCKTG R DA  +FDEMP+RN+ATWNAYISN+V
Sbjct: 126  TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             + R+ +A   F EF  + GE NSIT+CA LN C D   + LGRQ+H F++R G   DVS
Sbjct: 186  QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS 245

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLR-NVVSWCSMVAVYQQNDEEEKACVAFLSSRRE 1137
            V NGL+DFYGKCG+I SAEMVF+ +  R NVVSWCSM+A   QN EEE+AC+ FL +R+E
Sbjct: 246  VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE 305

Query: 1136 GLQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDC 957
             ++PTDFM SSVLSACA L GLE+GRSVHALAVKACV++N++VGSALVDMYGKCG+IE+ 
Sbjct: 306  -VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENA 364

Query: 956  ERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSAC 777
            E+ F E+PERNL+TWN M+GGYAHQG  DMAL LF+EMT G  H + P+YVTL+ +LS C
Sbjct: 365  EQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS-HGIRPSYVTLISILSVC 423

Query: 776  SRAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSV 597
            SR GAVE G++IF SMR  YG+EPGAEH+AC+VDL GR+G+V++AYEFI  M I+PT+SV
Sbjct: 424  SRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISV 483

Query: 596  WGALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKD 417
            WGALLGACR++GK ELGKIAA+KLFELD  DSGNHV+LSNM A+AGRWE+ATVVRKEMKD
Sbjct: 484  WGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKD 543

Query: 416  VGIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYD 237
            +GIKK  G SWI+VKN +H+FQAKD+SH+RNSEIQAML KLR  MK +GY PDTN +L+D
Sbjct: 544  IGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFD 603

Query: 236  LXXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREII 57
            L       EVWYHSEK+AL+FGLI++P GVPIRITKNLR+CGDCHSAIKFIS IV REII
Sbjct: 604  LEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREII 663

Query: 56   VRDNNRFHRFKDNHCSCR 3
            VRDN+RFHRFKD  CSC+
Sbjct: 664  VRDNHRFHRFKDGCCSCK 681



 Score =  149 bits (376), Expect = 4e-33
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 1/368 (0%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+     +MY K  L   A+ V      R V TW + IS  V   R   A   F   R  
Sbjct: 43   FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD 102

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
              + N  T+  V    +     + G+QIHG  ++ G   DV VG    D Y K G    A
Sbjct: 103  NVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDA 162

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              +F  M  RN+ +W + ++   Q+     A VAF        +P      + L+AC  +
Sbjct: 163  CNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDM 222

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPER-NLITWNTM 903
              L +GR +HA  V+    E+V V + L+D YGKCG+I   E  F+ I  R N+++W +M
Sbjct: 223  VRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSM 282

Query: 902  LGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQ 723
            L         + A  +F +  +    EV P    +  VLSAC+  G +E G  +  ++  
Sbjct: 283  LAALVQNHEEERACMVFLQARK----EVEPTDFMISSVLSACAELGGLELGRSVH-ALAV 337

Query: 722  RYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGK 543
            +  +E      + +VD++G+ G +E A +  + +P R  V+ W A++G     G  ++  
Sbjct: 338  KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVT-WNAMIGGYAHQGDIDM-- 394

Query: 542  IAADKLFE 519
              A +LFE
Sbjct: 395  --ALRLFE 400



 Score =  117 bits (293), Expect = 2e-23
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 1/284 (0%)
 Frame = -3

Query: 1424 SITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS-VGNGLVDFYGKCGEIESAEMVF 1248
            S+   AV   CS     +LGR IH  +IR+      S + N LV+ Y K   + SA+ V 
Sbjct: 11   SLLESAVSTHCS-----ILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVL 65

Query: 1247 SGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLE 1068
            S   LR VV+W S+++    N     A + F + RR+ +QP DF    V  A A +    
Sbjct: 66   SLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPM 125

Query: 1067 VGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYA 888
             G+ +H LA+K  +  +V+VG +  DMY K G   D    FDE+P+RNL TWN  +    
Sbjct: 126  TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185

Query: 887  HQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGME 708
                +  A+  FKE     G    PN +T    L+AC     +  G ++  +   R G +
Sbjct: 186  QDRRSLDAIVAFKEFLCVHG---EPNSITFCAFLNACVDMVRLNLGRQLH-AFIVRCGYK 241

Query: 707  PGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGA 576
                    ++D +G+ G +  A      +  R  V  W ++L A
Sbjct: 242  EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA 285


>ref|XP_004496720.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Cicer arietinum]
          Length = 684

 Score =  795 bits (2054), Expect = 0.0
 Identities = 384/558 (68%), Positives = 463/558 (82%), Gaps = 1/558 (0%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+H L+LK G   DVFVGCSAFDMYCKTGLR +AR +FDEMP RN ATWNAYISN+V
Sbjct: 126  TGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAV 185

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR+ +A   F EF  + G  NSIT+CA LN C DT    LGRQ+H F++R G   DVS
Sbjct: 186  QDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVS 245

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSL-RNVVSWCSMVAVYQQNDEEEKACVAFLSSRRE 1137
            V NGL+DFYGKCG+I S+E+VFS +   RNVVSWCSM+A   QN EEE+AC+ FL +R+E
Sbjct: 246  VANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE 305

Query: 1136 GLQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDC 957
             ++PTDFM SS+LSACA L GLE+GRSVHALAVKACV++N++VGSALVD+YGKCG+IE+ 
Sbjct: 306  -VEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENA 364

Query: 956  ERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSAC 777
            E+ F E+PERNL+TWN ++GGYAHQG   MAL LF+EMT G    ++P+YVTLV VLSAC
Sbjct: 365  EQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGS-RGMTPSYVTLVSVLSAC 423

Query: 776  SRAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSV 597
            SRAGAVE GM+IF SMR  YG+EPGAEHYAC+VDL GR+G+V++AYEFI  MP+ PT+SV
Sbjct: 424  SRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISV 483

Query: 596  WGALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKD 417
            WGALLGACR++GK +LGKIAA+KLFELD  DSGNHV+LSNM A+AGRWE+AT++RKEMKD
Sbjct: 484  WGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKD 543

Query: 416  VGIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYD 237
            +GIKK  G SWI+VKN +H+FQAKD+SHERN+EIQAML KLRR+MK +GY PDTN +L+D
Sbjct: 544  IGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFD 603

Query: 236  LXXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREII 57
            L       EVWYHSEK+AL+FGLI++P  VPIRITKNLR+CGDCHSAIKFIS IV REII
Sbjct: 604  LEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREII 663

Query: 56   VRDNNRFHRFKDNHCSCR 3
            VRDN+RFHRFKD  CSC+
Sbjct: 664  VRDNHRFHRFKDGCCSCK 681



 Score =  142 bits (357), Expect = 6e-31
 Identities = 101/348 (29%), Positives = 152/348 (43%), Gaps = 1/348 (0%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+     +MY K  L   A+ V        V TW + IS  V   R   AF  F   R  
Sbjct: 43   FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRD 102

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
                N  T+  V    +     + G+Q+H   ++ G   DV VG    D Y K G    A
Sbjct: 103  SVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEA 162

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              +F  M  RN  +W + ++   Q+     A  AF         P      + L+AC   
Sbjct: 163  RNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDT 222

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEI-PERNLITWNTM 903
                +GR +HA  V+    E+V V + L+D YGKCG+I   E  F  I  +RN+++W +M
Sbjct: 223  LRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSM 282

Query: 902  LGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQ 723
            L         + A  +F E  +    EV P    +  +LSAC+  G +E G  +  ++  
Sbjct: 283  LAALVQNHEEERACMVFLEARK----EVEPTDFMISSMLSACAELGGLELGRSVH-ALAV 337

Query: 722  RYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLG 579
            +  +E      + +VDL+G+ G +E A +  T MP R  V+ W AL+G
Sbjct: 338  KACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVT-WNALIG 384



 Score =  119 bits (297), Expect = 5e-24
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
 Frame = -3

Query: 1409 AVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS-VGNGLVDFYGKCGEIESAEMVFSGMSL 1233
            ++L     T   +LGR +H  +IR+      S + N LV+ Y K   + SA++V S   L
Sbjct: 11   SLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHL 70

Query: 1232 RNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRSV 1053
              VV+W S+++    N     A + F + RR+ + P DF    V  A A L     G+ V
Sbjct: 71   PTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQV 130

Query: 1052 HALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGHA 873
            HALA+K     +V+VG +  DMY K G   +    FDE+P RN  TWN  +      G +
Sbjct: 131  HALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRS 190

Query: 872  DMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEPGAEH 693
              A+A FKE     GH   PN +T    L+AC        G ++  +   R G +     
Sbjct: 191  LDAIAAFKEFLCVHGH---PNSITFCAFLNACVDTLRSNLGRQLH-AFIVRCGYKEDVSV 246

Query: 692  YACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGA 576
               ++D +G+ G +  +    + +  +  V  W ++L A
Sbjct: 247  ANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAA 285


>ref|XP_004231485.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Solanum lycopersicum]
          Length = 687

 Score =  792 bits (2046), Expect = 0.0
 Identities = 387/557 (69%), Positives = 458/557 (82%), Gaps = 1/557 (0%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G QLH L+LK    +D FVGCSAFDMYCKTGLRE A+KVFDEMP RN+ATWNA ISNSV 
Sbjct: 129  GLQLHALALKGSFINDAFVGCSAFDMYCKTGLREYAQKVFDEMPHRNIATWNACISNSVL 188

Query: 1490 EGRTREAFCTFVEFRVLGGEG-NSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
            +GR  +A   FVE   LG E  NSIT+   LN CSD   + LG+Q+HG++IR G   DVS
Sbjct: 189  DGRPYDASLKFVELLRLGEEPPNSITFSVFLNACSDGLYLKLGQQLHGYVIRLGFGSDVS 248

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NG+VDFYGKC +++ +E+VF+ +++ N VSW +M+AVY+QND  +KA + FL +R+EG
Sbjct: 249  VLNGMVDFYGKCHQVKYSELVFNEINVCNGVSWSTMLAVYEQNDIWDKAFMLFLKARKEG 308

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++PT+FM SSVLSACAG A LE+GRS+H LAVKAC++ NV+VGSALVDMYGKCG+IE+CE
Sbjct: 309  IKPTEFMVSSVLSACAGTAVLELGRSIHGLAVKACIEHNVFVGSALVDMYGKCGSIENCE 368

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
             AF E+PERNLITWN ++GGYAHQG ADMAL LF+EMT    H+V P+YVT +CVL+ACS
Sbjct: 369  SAFYEMPERNLITWNAVMGGYAHQGCADMALRLFEEMTSES-HDVVPSYVTFICVLTACS 427

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAV+ GM+IF SMR++YG+EPG EHYAC+VD+ GRAG+VE+AY+FI  MP+ PTVSVW
Sbjct: 428  RAGAVKIGMDIFESMRKKYGIEPGPEHYACVVDILGRAGLVERAYDFIKKMPVPPTVSVW 487

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GALLGACRV+GKPELGK+AAD LF LDP DSGNHV+LSNMFAAAGRW +A +VRKEMKDV
Sbjct: 488  GALLGACRVHGKPELGKVAADNLFRLDPLDSGNHVVLSNMFAAAGRWHEANLVRKEMKDV 547

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GI KGAG SWIS KN +H+FQAKDT+HER  EIQAML KLRRDMKA GY  DTN ALYDL
Sbjct: 548  GITKGAGISWISAKNSIHVFQAKDTTHERYPEIQAMLAKLRRDMKAEGYIADTNSALYDL 607

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EVW+HSEK+AL+FGLI+IPPGVPIRITKNLRVC DCHSAIKFIS I  REI+V
Sbjct: 608  EEEEKESEVWHHSEKIALAFGLITIPPGVPIRITKNLRVCVDCHSAIKFISGITGREIVV 667

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFH FKD  CSCR
Sbjct: 668  RDNNRFHSFKDYQCSCR 684



 Score =  133 bits (334), Expect = 3e-28
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1541 PERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGR 1362
            P R+V TW A I+ SV  G    A   F + R    + N  T+  +    +     ++G 
Sbjct: 71   PFRSVVTWTALIAGSVQNGHFTSALLHFSDMRCQSVQPNDFTFPCLFKASAFLHYPLMGL 130

Query: 1361 QIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQND 1182
            Q+H   ++     D  VG    D Y K G  E A+ VF  M  RN+ +W + ++    + 
Sbjct: 131  QLHALALKGSFINDAFVGCSAFDMYCKTGLREYAQKVFDEMPHRNIATWNACISNSVLDG 190

Query: 1181 EEEKACVAFLSSRREGLQPTDFMASSV-LSACAGLAGLEVGRSVHALAVKACVDENVYVG 1005
                A + F+   R G +P + +  SV L+AC+    L++G+ +H   ++     +V V 
Sbjct: 191  RPYDASLKFVELLRLGEEPPNSITFSVFLNACSDGLYLKLGQQLHGYVIRLGFGSDVSVL 250

Query: 1004 SALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGH 825
            + +VD YGKC  ++  E  F+EI   N ++W+TML  Y      D A  LF +  + G  
Sbjct: 251  NGMVDFYGKCHQVKYSELVFNEINVCNGVSWSTMLAVYEQNDIWDKAFMLFLKARKEG-- 308

Query: 824  EVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQ 645
             + P    +  VLSAC+    +E G  I   +  +  +E      + +VD++G+ G +E 
Sbjct: 309  -IKPTEFMVSSVLSACAGTAVLELGRSIH-GLAVKACIEHNVFVGSALVDMYGKCGSIEN 366

Query: 644  AYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADKLFE 519
                   MP R  ++ W A++G     G  ++    A +LFE
Sbjct: 367  CESAFYEMPERNLIT-WNAVMGGYAHQGCADM----ALRLFE 403



 Score =  109 bits (272), Expect = 4e-21
 Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
 Frame = -3

Query: 1406 VLNGCSDTGDVVLGRQIHGFLIRS-GCDRDVSVGNGLVDFYGKCGEIESAEMVFS--GMS 1236
            ++     T  ++LGR IH  +IR+        + N L++FY K   + SA+++ S     
Sbjct: 12   LIESALSTQSLLLGRAIHAHIIRTIEPPFPPFLSNHLINFYSKLDSLNSAQLLLSLTPPP 71

Query: 1235 LRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRS 1056
             R+VV+W +++A   QN     A + F   R + +QP DF    +  A A L    +G  
Sbjct: 72   FRSVVTWTALIAGSVQNGHFTSALLHFSDMRCQSVQPNDFTFPCLFKASAFLHYPLMGLQ 131

Query: 1055 VHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGH 876
            +HALA+K     + +VG +  DMY K G  E  ++ FDE+P RN+ TWN  +      G 
Sbjct: 132  LHALALKGSFINDAFVGCSAFDMYCKTGLREYAQKVFDEMPHRNIATWNACISNSVLDGR 191

Query: 875  ADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIF-WSMRQRYGMEPGA 699
               A   F E+   G  E  PN +T    L+ACS    ++ G ++  + +R  +G +   
Sbjct: 192  PYDASLKFVELLRLG--EEPPNSITFSVFLNACSDGLYLKLGQQLHGYVIRLGFGSDVSV 249

Query: 698  EHYACMVDLFGRAGMVE 648
             +   MVD +G+   V+
Sbjct: 250  LN--GMVDFYGKCHQVK 264


>ref|XP_007143263.1| hypothetical protein PHAVU_007G057700g [Phaseolus vulgaris]
            gi|561016453|gb|ESW15257.1| hypothetical protein
            PHAVU_007G057700g [Phaseolus vulgaris]
          Length = 685

 Score =  791 bits (2042), Expect = 0.0
 Identities = 383/559 (68%), Positives = 458/559 (81%), Gaps = 2/559 (0%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+QLH L+LK G   DVFVGCSAFDMY KTGLR +AR +F+EMP RN+ATWNAYISN+V
Sbjct: 126  TGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRVEARNMFEEMPHRNLATWNAYISNAV 185

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR  +A   F +F   GGE N+IT+C  LN C+D   + LG Q+HGF++RS    DVS
Sbjct: 186  QDGRCLDAVAAFKKFLCEGGEPNAITFCVFLNACADMVSLELGIQVHGFIVRSRYREDVS 245

Query: 1313 VGNGLVDFYGKCGEIESAEMVFS--GMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRR 1140
            V NGL+DFYGKCG+I S+EMVFS  G   RNVVSWCSM+A   QN EEE+AC  FL +R+
Sbjct: 246  VSNGLIDFYGKCGDIVSSEMVFSTIGGGRRNVVSWCSMLAALVQNHEEERACTVFLKARK 305

Query: 1139 EGLQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIED 960
            E ++PTDFM SSVLSACA L GLE+GRSVHALAVKACV+EN+YVGSALVD+YGKCG+IE 
Sbjct: 306  E-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEENIYVGSALVDLYGKCGSIEK 364

Query: 959  CERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSA 780
             E+ F E+PE+NL+TWN M+GGYAH G  DMAL+LF+EMT      ++PNYVTLV VLSA
Sbjct: 365  AEQVFREMPEKNLVTWNAMIGGYAHLGDVDMALSLFEEMTLSS-FGITPNYVTLVSVLSA 423

Query: 779  CSRAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVS 600
            CSRAGAVE G+ IF SMR RYG+EPGAEHYAC+VDL GR+G+V++AYEFI  MPI PT+S
Sbjct: 424  CSRAGAVERGLHIFESMRGRYGIEPGAEHYACIVDLLGRSGLVDRAYEFIKRMPILPTIS 483

Query: 599  VWGALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMK 420
            VWGALLG+C+++GK +LGKIAA+KLF+LDP DSGNHV+ SNM A+AGRWE+AT+VRKEM+
Sbjct: 484  VWGALLGSCKMHGKTKLGKIAAEKLFQLDPDDSGNHVVFSNMLASAGRWEEATIVRKEMR 543

Query: 419  DVGIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALY 240
            DVGIKK  G SW++VKN VH+FQAKD+SHE NSEIQAML KLR +MK +GY PDTN +L+
Sbjct: 544  DVGIKKNVGYSWVAVKNRVHVFQAKDSSHENNSEIQAMLAKLRGEMKKAGYVPDTNLSLF 603

Query: 239  DLXXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREI 60
            DL       EVWYHSEK+AL+FGLI++P GVPIRITKNLR+C DCHSAIKFIS IV REI
Sbjct: 604  DLEEEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICADCHSAIKFISKIVGREI 663

Query: 59   IVRDNNRFHRFKDNHCSCR 3
            IVRDNNRFH FK+  CSC+
Sbjct: 664  IVRDNNRFHHFKNGWCSCK 682



 Score =  147 bits (371), Expect = 1e-32
 Identities = 106/383 (27%), Positives = 168/383 (43%), Gaps = 2/383 (0%)
 Frame = -3

Query: 1598 DMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNSI 1419
            +MY K      A  +      R V TW + IS  V   R   AF  F   R      N  
Sbjct: 50   NMYSKLDRLNSAELLLSLTNPRTVVTWTSLISGCVHNRRFTSAFLHFSNMRRESVLPNDF 109

Query: 1418 TYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSGM 1239
            T+  V            G+Q+H   ++ G   DV VG    D Y K G    A  +F  M
Sbjct: 110  TFPCVFKASGSLHMPFTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRVEARNMFEEM 169

Query: 1238 SLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGR 1059
              RN+ +W + ++   Q+     A  AF     EG +P        L+ACA +  LE+G 
Sbjct: 170  PHRNLATWNAYISNAVQDGRCLDAVAAFKKFLCEGGEPNAITFCVFLNACADMVSLELGI 229

Query: 1058 SVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEI--PERNLITWNTMLGGYAH 885
             VH   V++   E+V V + L+D YGKCG+I   E  F  I    RN+++W +ML     
Sbjct: 230  QVHGFIVRSRYREDVSVSNGLIDFYGKCGDIVSSEMVFSTIGGGRRNVVSWCSMLAALVQ 289

Query: 884  QGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEP 705
                + A  +F +  +    EV P    +  VLSAC+  G +E G  +  ++  +  +E 
Sbjct: 290  NHEEERACTVFLKARK----EVEPTDFMISSVLSACAELGGLELGRSVH-ALAVKACVEE 344

Query: 704  GAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADKL 525
                 + +VDL+G+ G +E+A +    MP +  V+ W A++G     G  ++     +++
Sbjct: 345  NIYVGSALVDLYGKCGSIEKAEQVFREMPEKNLVT-WNAMIGGYAHLGDVDMALSLFEEM 403

Query: 524  FELDPKDSGNHVLLSNMFAAAGR 456
                   + N+V L ++ +A  R
Sbjct: 404  TLSSFGITPNYVTLVSVLSACSR 426



 Score =  126 bits (317), Expect = 3e-26
 Identities = 88/283 (31%), Positives = 142/283 (50%), Gaps = 5/283 (1%)
 Frame = -3

Query: 1409 AVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS--VGNGLVDFYGKCGEIESAEMVFSGMS 1236
            ++L     T   +LGR +H  ++R+  D  +S  + N LV+ Y K   + SAE++ S  +
Sbjct: 11   SLLESAVSTHSSLLGRAVHALILRTH-DTPLSSFLCNHLVNMYSKLDRLNSAELLLSLTN 69

Query: 1235 LRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRS 1056
             R VV+W S+++    N     A + F + RRE + P DF    V  A   L     G+ 
Sbjct: 70   PRTVVTWTSLISGCVHNRRFTSAFLHFSNMRRESVLPNDFTFPCVFKASGSLHMPFTGKQ 129

Query: 1055 VHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGH 876
            +HALA+K     +V+VG +  DMY K G   +    F+E+P RNL TWN  +      G 
Sbjct: 130  LHALALKGGNILDVFVGCSAFDMYSKTGLRVEARNMFEEMPHRNLATWNAYISNAVQDGR 189

Query: 875  ADMALALFKE-MTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIF-WSMRQRYGMEPG 702
               A+A FK+ + EGG     PN +T    L+AC+   ++E G+++  + +R RY  +  
Sbjct: 190  CLDAVAAFKKFLCEGG----EPNAITFCVFLNACADMVSLELGIQVHGFIVRSRYREDVS 245

Query: 701  AEHYACMVDLFGRAG-MVEQAYEFITVMPIRPTVSVWGALLGA 576
              +   ++D +G+ G +V     F T+   R  V  W ++L A
Sbjct: 246  VSN--GLIDFYGKCGDIVSSEMVFSTIGGGRRNVVSWCSMLAA 286


>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Glycine max]
          Length = 686

 Score =  789 bits (2037), Expect = 0.0
 Identities = 381/559 (68%), Positives = 462/559 (82%), Gaps = 2/559 (0%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+QLH L+LK G   DVFVGCSAFDMY KTGLR +AR +FDEMP RN+ATWNAY+SN+V
Sbjct: 127  TGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAV 186

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR  +A   F +F  + GE N+IT+CA LN C+D   + LGRQ+HGF++RS    DVS
Sbjct: 187  QDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVS 246

Query: 1313 VGNGLVDFYGKCGEIESAEMVFS--GMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRR 1140
            V NGL+DFYGKCG+I S+E+VFS  G   RNVVSWCS++A   QN EEE+AC+ FL +R+
Sbjct: 247  VFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARK 306

Query: 1139 EGLQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIED 960
            E ++PTDFM SSVLSACA L GLE+GRSVHALA+KACV+EN++VGSALVD+YGKCG+IE 
Sbjct: 307  E-VEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEY 365

Query: 959  CERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSA 780
             E+ F E+PERNL+TWN M+GGYAH G  DMAL+LF+EMT G    ++ +YVTLV VLSA
Sbjct: 366  AEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCG-IALSYVTLVSVLSA 424

Query: 779  CSRAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVS 600
            CSRAGAVE G++IF SMR RYG+EPGAEHYAC+VDL GR+G+V++AYEFI  MPI PT+S
Sbjct: 425  CSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTIS 484

Query: 599  VWGALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMK 420
            VWGALLGAC+++GK +LGKIAA+KLFELDP DSGNHV+ SNM A+AGRWE+AT+VRKEM+
Sbjct: 485  VWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMR 544

Query: 419  DVGIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALY 240
            D+GIKK  G SW++VKN VH+FQAKD+ HE+NSEIQAML KLR +MK +GY PD N +L+
Sbjct: 545  DIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLF 604

Query: 239  DLXXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREI 60
            DL       EVWYHSEK+AL+FGLI++P GVPIRITKNLR+C DCHSAIKFIS IV REI
Sbjct: 605  DLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREI 664

Query: 59   IVRDNNRFHRFKDNHCSCR 3
            IVRDNNRFHRFKD  CSC+
Sbjct: 665  IVRDNNRFHRFKDGWCSCK 683



 Score =  144 bits (362), Expect = 2e-31
 Identities = 100/346 (28%), Positives = 158/346 (45%), Gaps = 6/346 (1%)
 Frame = -3

Query: 1598 DMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNSI 1419
            +MY K  L   A+ V      R V TW + IS  V   R   A   F   R      N  
Sbjct: 51   NMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDF 110

Query: 1418 TYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSGM 1239
            T+  V    +     V G+Q+H   ++ G   DV VG    D Y K G    A  +F  M
Sbjct: 111  TFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEM 170

Query: 1238 SLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGL----QPTDFMASSVLSACAGLAGL 1071
              RN+ +W      Y  N  ++  C+  +++ ++ L    +P      + L+ACA +  L
Sbjct: 171  PHRNLATW----NAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSL 226

Query: 1070 EVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEI--PERNLITWNTMLG 897
            E+GR +H   V++   E+V V + L+D YGKCG+I   E  F  I    RN+++W ++L 
Sbjct: 227  ELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLA 286

Query: 896  GYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRY 717
                    + A  +F +  +    EV P    +  VLSAC+  G +E G  +  ++  + 
Sbjct: 287  ALVQNHEEERACMVFLQARK----EVEPTDFMISSVLSACAELGGLELGRSVH-ALALKA 341

Query: 716  GMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLG 579
             +E      + +VDL+G+ G +E A +    MP R  V+ W A++G
Sbjct: 342  CVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVT-WNAMIG 386



 Score =  118 bits (295), Expect = 9e-24
 Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
 Frame = -3

Query: 1373 VLGRQIHGFLIRSGCDRDVS-VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAV 1197
            +LGR +H  ++R+      S + N LV+ Y K     SA++V S  + R VV+W S+++ 
Sbjct: 24   LLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISG 83

Query: 1196 YQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDEN 1017
               N     A + F + RRE + P DF    V  A A L     G+ +HALA+K     +
Sbjct: 84   CVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILD 143

Query: 1016 VYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTE 837
            V+VG +  DMY K G   +    FDE+P RNL TWN  +      G    A+A FK+   
Sbjct: 144  VFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLC 203

Query: 836  GGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIF-WSMRQRYGMEPGAEHYACMVDLFGRA 660
              G    PN +T    L+AC+   ++E G ++  + +R RY  +     +  ++D +G+ 
Sbjct: 204  VDG---EPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSV--FNGLIDFYGKC 258

Query: 659  G-MVEQAYEFITVMPIRPTVSVWGALLGA 576
            G +V     F  +   R  V  W +LL A
Sbjct: 259  GDIVSSELVFSRIGSGRRNVVSWCSLLAA 287


>ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
            lyrata] gi|297316113|gb|EFH46536.1| hypothetical protein
            ARALYDRAFT_493409 [Arabidopsis lyrata subsp. lyrata]
          Length = 684

 Score =  774 bits (1998), Expect = 0.0
 Identities = 373/557 (66%), Positives = 452/557 (81%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+H L++K G   DVFVGCSAFDMYCKT LR+DARK+FDE+PERN+ TWNAYISNSV
Sbjct: 126  TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSV 185

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR +EA   F+EFR +GG+ NSIT+C  LN CSD   + LG Q+HG + RSG D DVS
Sbjct: 186  TDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVS 245

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGL+DFYGKC +I S+E++F+ M ++N VSWCS+VA Y QN E+EKA V +L SR+E 
Sbjct: 246  VYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEI 305

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++ +DFM SSVLSACAG+AGLE+GRS+HA AVKACV+ N++VGSALVDMYGKCG IED E
Sbjct: 306  VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSE 365

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
            +AFDE+PE+NL+T N+++GGYAHQG  DMALALF++M   G    +PNY+T V +LSACS
Sbjct: 366  QAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGP-APNYMTFVSLLSACS 424

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE GM+IF SM+  YG+EPGAEHY+C+VD+ GRAGMVEQA+EFI  MPI+PT+SVW
Sbjct: 425  RAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVW 484

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GAL  ACR++GKP LG +AA+ LF+LDPKDSGNHVLLSN FAAAGRW +A  VR+EMK V
Sbjct: 485  GALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGV 544

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAG SWI+VKN VH FQAKD SH+ N EIQ ML KLR  M+A+GY PD   +LYDL
Sbjct: 545  GIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDL 604

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EV +HSEKLAL+FGL+++P  VPIRITKNLR+CGDCHS  KF+S  V REIIV
Sbjct: 605  EEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFHRFKD  CSC+
Sbjct: 665  RDNNRFHRFKDGICSCK 681



 Score =  140 bits (354), Expect = 1e-30
 Identities = 115/420 (27%), Positives = 189/420 (45%), Gaps = 12/420 (2%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+     +MY K    E AR V    P RNV +W + +S     G    A   F E R  
Sbjct: 43   FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE 102

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
            G   N  T+  V    +     V G+QIH   ++ G   DV VG    D Y K    + A
Sbjct: 103  GVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              +F  +  RN+ +W + ++    +   ++A  AF+  RR G QP        L+AC+  
Sbjct: 163  RKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDG 222

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTML 900
              L++G  +H L  ++  D +V V + L+D YGKC  I   E  F E+  +N ++W +++
Sbjct: 223  LLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLV 282

Query: 899  GGYAHQGHADMALALF----KEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWS 732
              Y      + A  L+    KE+ E     +S        VLSAC+    +E G  I  +
Sbjct: 283  AAYVQNHEDEKASVLYLRSRKEIVETSDFMIS-------SVLSACAGMAGLELGRSIH-A 334

Query: 731  MRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPE 552
               +  +E      + +VD++G+ G +E + +    MP +  V++  +L+G     G+ +
Sbjct: 335  HAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTL-NSLIGGYAHQGQVD 393

Query: 551  LGKIAADKLFE-LDPKDSG---NHVLLSNMFAA---AGRWEDATVVRKEMKDV-GIKKGA 396
            +    A  LFE + P+  G   N++   ++ +A   AG  E+   +   MK   GI+ GA
Sbjct: 394  M----ALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGA 449


>ref|NP_193221.3| pentatricopeptide repeat-containing protein LOI1 [Arabidopsis
            thaliana] gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE 1
            gi|110735893|dbj|BAE99922.1| hypothetical protein
            [Arabidopsis thaliana] gi|332658109|gb|AEE83509.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 684

 Score =  768 bits (1984), Expect = 0.0
 Identities = 372/557 (66%), Positives = 450/557 (80%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+H L++K G   DVFVGCSAFDMYCKT LR+DARK+FDE+PERN+ TWNA+ISNSV
Sbjct: 126  TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR REA   F+EFR + G  NSIT+CA LN CSD   + LG Q+HG ++RSG D DVS
Sbjct: 186  TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGL+DFYGKC +I S+E++F+ M  +N VSWCS+VA Y QN E+EKA V +L SR++ 
Sbjct: 246  VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++ +DFM SSVLSACAG+AGLE+GRS+HA AVKACV+  ++VGSALVDMYGKCG IED E
Sbjct: 306  VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
            +AFDE+PE+NL+T N+++GGYAHQG  DMALALF+EM   G    +PNY+T V +LSACS
Sbjct: 366  QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP-TPNYMTFVSLLSACS 424

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE GM+IF SMR  YG+EPGAEHY+C+VD+ GRAGMVE+AYEFI  MPI+PT+SVW
Sbjct: 425  RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GAL  ACR++GKP+LG +AA+ LF+LDPKDSGNHVLLSN FAAAGRW +A  VR+E+K V
Sbjct: 485  GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAG SWI+VKN VH FQAKD SH  N EIQ  L KLR +M+A+GY PD   +LYDL
Sbjct: 545  GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EV +HSEKLAL+FGL+S+P  VPIRITKNLR+CGDCHS  KF+S  V REIIV
Sbjct: 605  EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFHRFKD  CSC+
Sbjct: 665  RDNNRFHRFKDGICSCK 681



 Score =  133 bits (334), Expect = 3e-28
 Identities = 105/416 (25%), Positives = 181/416 (43%), Gaps = 8/416 (1%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+     +MY K    E AR V    P RNV +W + IS     G    A   F E R  
Sbjct: 43   FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
            G   N  T+       +     V G+QIH   ++ G   DV VG    D Y K    + A
Sbjct: 103  GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              +F  +  RN+ +W + ++    +    +A  AF+  RR    P      + L+AC+  
Sbjct: 163  RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTML 900
              L +G  +H L +++  D +V V + L+D YGKC  I   E  F E+  +N ++W +++
Sbjct: 223  LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282

Query: 899  GGYAHQGHADMALALF----KEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWS 732
              Y      + A  L+    K++ E     +S        VLSAC+    +E G  I  +
Sbjct: 283  AAYVQNHEDEKASVLYLRSRKDIVETSDFMIS-------SVLSACAGMAGLELGRSIH-A 334

Query: 731  MRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPE 552
               +  +E      + +VD++G+ G +E + +    MP +  V+   +L+G     G+ +
Sbjct: 335  HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT-RNSLIGGYAHQGQVD 393

Query: 551  LGKIAADKLFELDPKDSGNHVLLSNMFAA---AGRWEDATVVRKEMKDV-GIKKGA 396
            +     +++       + N++   ++ +A   AG  E+   +   M+   GI+ GA
Sbjct: 394  MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449


>gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  768 bits (1984), Expect = 0.0
 Identities = 372/557 (66%), Positives = 450/557 (80%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+H L++K G   DVFVGCSAFDMYCKT LR+DARK+FDE+PERN+ TWNA+ISNSV
Sbjct: 76   TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 135

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR REA   F+EFR + G  NSIT+CA LN CSD   + LG Q+HG ++RSG D DVS
Sbjct: 136  TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 195

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGL+DFYGKC +I S+E++F+ M  +N VSWCS+VA Y QN E+EKA V +L SR++ 
Sbjct: 196  VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 255

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++ +DFM SSVLSACAG+AGLE+GRS+HA AVKACV+  ++VGSALVDMYGKCG IED E
Sbjct: 256  VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 315

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
            +AFDE+PE+NL+T N+++GGYAHQG  DMALALF+EM   G    +PNY+T V +LSACS
Sbjct: 316  QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP-TPNYMTFVSLLSACS 374

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE GM+IF SMR  YG+EPGAEHY+C+VD+ GRAGMVE+AYEFI  MPI+PT+SVW
Sbjct: 375  RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 434

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GAL  ACR++GKP+LG +AA+ LF+LDPKDSGNHVLLSN FAAAGRW +A  VR+E+K V
Sbjct: 435  GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 494

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAG SWI+VKN VH FQAKD SH  N EIQ  L KLR +M+A+GY PD   +LYDL
Sbjct: 495  GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 554

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EV +HSEKLAL+FGL+S+P  VPIRITKNLR+CGDCHS  KF+S  V REIIV
Sbjct: 555  EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 614

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFHRFKD  CSC+
Sbjct: 615  RDNNRFHRFKDGICSCK 631



 Score =  132 bits (332), Expect = 5e-28
 Identities = 104/408 (25%), Positives = 178/408 (43%), Gaps = 8/408 (1%)
 Frame = -3

Query: 1595 MYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNSIT 1416
            MY K    E AR V    P RNV +W + IS     G    A   F E R  G   N  T
Sbjct: 1    MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 1415 YCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSGMS 1236
            +       +     V G+QIH   ++ G   DV VG    D Y K    + A  +F  + 
Sbjct: 61   FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 1235 LRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRS 1056
             RN+ +W + ++    +    +A  AF+  RR    P      + L+AC+    L +G  
Sbjct: 121  ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 1055 VHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGH 876
            +H L +++  D +V V + L+D YGKC  I   E  F E+  +N ++W +++  Y     
Sbjct: 181  LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 875  ADMALALF----KEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGME 708
             + A  L+    K++ E     +S        VLSAC+    +E G  I  +   +  +E
Sbjct: 241  DEKASVLYLRSRKDIVETSDFMIS-------SVLSACAGMAGLELGRSIH-AHAVKACVE 292

Query: 707  PGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPELGKIAADK 528
                  + +VD++G+ G +E + +    MP +  V+   +L+G     G+ ++     ++
Sbjct: 293  RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT-RNSLIGGYAHQGQVDMALALFEE 351

Query: 527  LFELDPKDSGNHVLLSNMFAA---AGRWEDATVVRKEMKDV-GIKKGA 396
            +       + N++   ++ +A   AG  E+   +   M+   GI+ GA
Sbjct: 352  MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 399


>ref|XP_006283247.1| hypothetical protein CARUB_v10004282mg [Capsella rubella]
            gi|482551952|gb|EOA16145.1| hypothetical protein
            CARUB_v10004282mg [Capsella rubella]
          Length = 684

 Score =  767 bits (1981), Expect = 0.0
 Identities = 371/557 (66%), Positives = 449/557 (80%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            TG+Q+HGL++K G   DVFVGCSAFDMYCKT LR+DAR++FDE+PERN  TWNA+ISNSV
Sbjct: 126  TGKQIHGLAVKCGRILDVFVGCSAFDMYCKTRLRDDARQLFDEIPERNCETWNAFISNSV 185

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             +GR REA   F+EFR +GG+ N+IT+C  LN CSD   + LG+Q+HG + R G D DVS
Sbjct: 186  TDGRPREAIEAFIEFRRIGGQPNTITFCGFLNACSDGLHLNLGKQLHGLVFRCGFDTDVS 245

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            V NGL+DFYGKC +I  +E+VF+ M  +N VSWCS+VA Y QN E+EKA + +L SR+E 
Sbjct: 246  VYNGLIDFYGKCKQIICSEIVFAEMGTKNAVSWCSLVAAYVQNHEDEKASLLYLRSRKEI 305

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++ +DFM SS LSACAG+AGLE+GRS+HA AVKACV+  ++VGSALVDMYGKCG IED E
Sbjct: 306  VETSDFMISSALSACAGMAGLELGRSIHAHAVKACVEMTIFVGSALVDMYGKCGCIEDSE 365

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
            +AFDE+PE+NL+T N+++GGYAHQG  DMALALF+EM   G    +PNY+T V +LSACS
Sbjct: 366  QAFDEMPEKNLVTLNSLIGGYAHQGEVDMALALFEEMAPRGCGP-TPNYMTFVSLLSACS 424

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            RAGAVE GM+IF SM+  YG+EPGAEHY+C+VD+ GRAGMVEQAY+FI  +PI+PT+SVW
Sbjct: 425  RAGAVENGMKIFDSMKSIYGIEPGAEHYSCIVDMLGRAGMVEQAYKFIKKLPIQPTISVW 484

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GAL  ACR++GKP LG +AA+ LF+LDPKDSGNHVLLSN FAAAGRW +A  VR+EMK V
Sbjct: 485  GALQNACRMHGKPHLGIVAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGV 544

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAG SWI+VKN VH FQAKD SH  N +IQ ML KLR +M+ASGY PD   +LYDL
Sbjct: 545  GIKKGAGYSWITVKNQVHAFQAKDRSHIMNKDIQTMLTKLRNEMEASGYKPDLKLSLYDL 604

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EV YHSEKLAL+FGL+++P GVPIRITKNLR+CGDCHS  KF+S  V REIIV
Sbjct: 605  EEEEKAAEVAYHSEKLALAFGLVALPLGVPIRITKNLRICGDCHSFFKFVSRSVKREIIV 664

Query: 53   RDNNRFHRFKDNHCSCR 3
            RDNNRFHRFKD  CSCR
Sbjct: 665  RDNNRFHRFKDGICSCR 681



 Score =  140 bits (352), Expect = 2e-30
 Identities = 111/417 (26%), Positives = 184/417 (44%), Gaps = 9/417 (2%)
 Frame = -3

Query: 1619 FVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVFEGRTREAFCTFVEFRVL 1440
            F+      +Y K    E AR V    P RNV +W + +S  V  G    A   FVE R  
Sbjct: 43   FLANYLISLYSKLDHPESARLVLRFTPARNVVSWTSLVSGLVNNGHFSIALFEFVEMRRD 102

Query: 1439 GGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESA 1260
            G   N  T+       +     V G+QIHG  ++ G   DV VG    D Y K    + A
Sbjct: 103  GVSPNDFTFPCAFKAVASLRLPVTGKQIHGLAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162

Query: 1259 EMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGL 1080
              +F  +  RN  +W + ++    +    +A  AF+  RR G QP        L+AC+  
Sbjct: 163  RQLFDEIPERNCETWNAFISNSVTDGRPREAIEAFIEFRRIGGQPNTITFCGFLNACSDG 222

Query: 1079 AGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTML 900
              L +G+ +H L  +   D +V V + L+D YGKC  I   E  F E+  +N ++W +++
Sbjct: 223  LHLNLGKQLHGLVFRCGFDTDVSVYNGLIDFYGKCKQIICSEIVFAEMGTKNAVSWCSLV 282

Query: 899  GGYAHQGHADMALALF-----KEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFW 735
              Y  Q H D   +L      KE+ E     +S         LSAC+    +E G  I  
Sbjct: 283  AAYV-QNHEDEKASLLYLRSRKEIVETSDFMIS-------SALSACAGMAGLELGRSIH- 333

Query: 734  SMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKP 555
            +   +  +E      + +VD++G+ G +E + +    MP +  V++  +L+G     G+ 
Sbjct: 334  AHAVKACVEMTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTL-NSLIGGYAHQGEV 392

Query: 554  ELGKIAADKLFELDPKDSGNHVLLSNMFAA---AGRWEDATVVRKEMKDV-GIKKGA 396
            ++     +++       + N++   ++ +A   AG  E+   +   MK + GI+ GA
Sbjct: 393  DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMKSIYGIEPGA 449



 Score =  122 bits (306), Expect = 5e-25
 Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 1/278 (0%)
 Frame = -3

Query: 1406 VLNGCSDTGDVVLGRQIHGFLIRS-GCDRDVSVGNGLVDFYGKCGEIESAEMVFSGMSLR 1230
            +L     T  + LGR +HG ++++        + N L+  Y K    ESA +V      R
Sbjct: 12   ILKNAISTSSMRLGRVVHGRIVKTLDSPPPPFLANYLISLYSKLDHPESARLVLRFTPAR 71

Query: 1229 NVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDFMASSVLSACAGLAGLEVGRSVH 1050
            NVVSW S+V+    N     A   F+  RR+G+ P DF       A A L     G+ +H
Sbjct: 72   NVVSWTSLVSGLVNNGHFSIALFEFVEMRRDGVSPNDFTFPCAFKAVASLRLPVTGKQIH 131

Query: 1049 ALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAHQGHAD 870
             LAVK     +V+VG +  DMY K    +D  + FDEIPERN  TWN  +      G   
Sbjct: 132  GLAVKCGRILDVFVGCSAFDMYCKTRLRDDARQLFDEIPERNCETWNAFISNSVTDGRPR 191

Query: 869  MALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEPGAEHY 690
             A+  F E    GG    PN +T    L+ACS    +  G ++   +  R G +     Y
Sbjct: 192  EAIEAFIEFRRIGG---QPNTITFCGFLNACSDGLHLNLGKQLH-GLVFRCGFDTDVSVY 247

Query: 689  ACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGA 576
              ++D +G+   +  +      M  +  VS W +L+ A
Sbjct: 248  NGLIDFYGKCKQIICSEIVFAEMGTKNAVS-WCSLVAA 284


>gb|EYU45680.1| hypothetical protein MIMGU_mgv1a026212mg [Mimulus guttatus]
          Length = 632

 Score =  765 bits (1975), Expect = 0.0
 Identities = 372/556 (66%), Positives = 440/556 (79%), Gaps = 1/556 (0%)
 Frame = -3

Query: 1670 GQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSVF 1491
            G+Q H L+ K  L  DVFV CSAFDMY KTG   DA K+F+EMP RN+ATWNA ISN+V 
Sbjct: 79   GRQFHALATKLLLIDDVFVACSAFDMYSKTGFLSDADKLFEEMPYRNIATWNACISNAVL 138

Query: 1490 EGRTREAFCTFVEF-RVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVS 1314
             G+  E    FV+  R      NSI++CA LN CSD   +  G+Q+HG+LI+ G + +VS
Sbjct: 139  NGKPHEGVRKFVQLLRYEEAAPNSISFCAFLNACSDGNFLTQGQQLHGYLIKQGHESEVS 198

Query: 1313 VGNGLVDFYGKCGEIESAEMVFSGMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREG 1134
            + NGL+DFYGKC +I+ ++ VF  M  RN VSWCSM+AVY+QND  E AC  F  +RR G
Sbjct: 199  ILNGLIDFYGKCRKIQFSKKVFDDMGERNSVSWCSMLAVYEQNDMGEMACGLFFKARRAG 258

Query: 1133 LQPTDFMASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCE 954
            ++PTDFM SSVLSACAGLA LE GR VH LAVKAC++EN++VGSALVDMYGKCG+IEDCE
Sbjct: 259  VEPTDFMVSSVLSACAGLAALESGRVVHGLAVKACIEENIFVGSALVDMYGKCGSIEDCE 318

Query: 953  RAFDEIPERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACS 774
            RAF  +P RNLI WN ++GGYAHQG AD+AL LF+EMT        PNYVT VCVL+ACS
Sbjct: 319  RAFFMLPNRNLICWNALIGGYAHQGRADVALELFREMT------YPPNYVTFVCVLTACS 372

Query: 773  RAGAVEEGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVW 594
            R G V EG++IF SM+ +YG+ PGAEHYAC+VD+ GRAG VE+A+ FI  M IRPT+S+W
Sbjct: 373  RGGLVSEGLDIFDSMKSKYGVNPGAEHYACVVDMLGRAGQVERAHSFIQQMRIRPTISIW 432

Query: 593  GALLGACRVYGKPELGKIAADKLFELDPKDSGNHVLLSNMFAAAGRWEDATVVRKEMKDV 414
            GALLGAC+++GK ELGKIAA+ LFELDP+DSGNHVLLSNMFAA+G+WE+A +VRKEMK+V
Sbjct: 433  GALLGACKMHGKSELGKIAAENLFELDPQDSGNHVLLSNMFAASGQWEEANLVRKEMKEV 492

Query: 413  GIKKGAGCSWISVKNVVHIFQAKDTSHERNSEIQAMLMKLRRDMKASGYTPDTNFALYDL 234
            GIKKGAGCSWISVKN VH+FQAKD SH RN EIQAML KLR+DMKA+GYTPDT  ALYD+
Sbjct: 493  GIKKGAGCSWISVKNSVHVFQAKDVSHSRNVEIQAMLGKLRKDMKAAGYTPDTKLALYDI 552

Query: 233  XXXXXXXEVWYHSEKLALSFGLISIPPGVPIRITKNLRVCGDCHSAIKFISSIVNREIIV 54
                   EVW HSEK+AL+FGLI++P GVPIRITKNLRVC DCHSAIKFIS IV REIIV
Sbjct: 553  EDEEKENEVWAHSEKIALAFGLIALPRGVPIRITKNLRVCVDCHSAIKFISGIVGREIIV 612

Query: 53   RDNNRFHRFKDNHCSC 6
            RDNNRFHRF D  CSC
Sbjct: 613  RDNNRFHRFLDYKCSC 628



 Score =  139 bits (349), Expect = 5e-30
 Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 3/352 (0%)
 Frame = -3

Query: 1595 MYCKTGLREDARKVFDEMPE--RNVATWNAYISNSVFEGRTREAFCTFVEFRVLGGEGNS 1422
            MY K    E AR +    P   R+V TW + IS +V  G    A   F   R    + N 
Sbjct: 1    MYSKLDRPEPARVLLSLTPPHFRSVVTWTSLISGNVQNGHFSSALSYFATMRRECIQPND 60

Query: 1421 ITYCAVLNGCSDTGDVVLGRQIHGFLIRSGCDRDVSVGNGLVDFYGKCGEIESAEMVFSG 1242
             T+  +    +     VLGRQ H    +     DV V     D Y K G +  A+ +F  
Sbjct: 61   FTFPCLFKASASLRSPVLGRQFHALATKLLLIDDVFVACSAFDMYSKTGFLSDADKLFEE 120

Query: 1241 MSLRNVVSWCSMVAVYQQNDEEEKACVAFLS-SRREGLQPTDFMASSVLSACAGLAGLEV 1065
            M  RN+ +W + ++    N +  +    F+   R E   P      + L+AC+    L  
Sbjct: 121  MPYRNIATWNACISNAVLNGKPHEGVRKFVQLLRYEEAAPNSISFCAFLNACSDGNFLTQ 180

Query: 1064 GRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEIPERNLITWNTMLGGYAH 885
            G+ +H   +K   +  V + + L+D YGKC  I+  ++ FD++ ERN ++W +ML  Y  
Sbjct: 181  GQQLHGYLIKQGHESEVSILNGLIDFYGKCRKIQFSKKVFDDMGERNSVSWCSMLAVYEQ 240

Query: 884  QGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVEEGMEIFWSMRQRYGMEP 705
                +MA  LF +    G   V P    +  VLSAC+   A+E G  +   +  +  +E 
Sbjct: 241  NDMGEMACGLFFKARRAG---VEPTDFMVSSVLSACAGLAALESG-RVVHGLAVKACIEE 296

Query: 704  GAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGACRVYGKPEL 549
                 + +VD++G+ G +E       ++P R  +  W AL+G     G+ ++
Sbjct: 297  NIFVGSALVDMYGKCGSIEDCERAFFMLPNRNLI-CWNALIGGYAHQGRADV 347



 Score =  110 bits (275), Expect = 2e-21
 Identities = 72/259 (27%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
 Frame = -3

Query: 1289 YGKCGEIESAEMVFS--GMSLRNVVSWCSMVAVYQQNDEEEKACVAFLSSRREGLQPTDF 1116
            Y K    E A ++ S      R+VV+W S+++   QN     A   F + RRE +QP DF
Sbjct: 2    YSKLDRPEPARVLLSLTPPHFRSVVTWTSLISGNVQNGHFSSALSYFATMRRECIQPNDF 61

Query: 1115 MASSVLSACAGLAGLEVGRSVHALAVKACVDENVYVGSALVDMYGKCGNIEDCERAFDEI 936
                +  A A L    +GR  HALA K  + ++V+V  +  DMY K G + D ++ F+E+
Sbjct: 62   TFPCLFKASASLRSPVLGRQFHALATKLLLIDDVFVACSAFDMYSKTGFLSDADKLFEEM 121

Query: 935  PERNLITWNTMLGGYAHQGHADMALALFKEMTEGGGHEVSPNYVTLVCVLSACSRAGAVE 756
            P RN+ TWN  +      G     +  F ++      E +PN ++    L+ACS    + 
Sbjct: 122  PYRNIATWNACISNAVLNGKPHEGVRKFVQLLR--YEEAAPNSISFCAFLNACSDGNFLT 179

Query: 755  EGMEIFWSMRQRYGMEPGAEHYACMVDLFGRAGMVEQAYEFITVMPIRPTVSVWGALLGA 576
            +G ++   + ++ G E        ++D +G+   ++ + +    M  R +VS W ++L  
Sbjct: 180  QGQQLHGYLIKQ-GHESEVSILNGLIDFYGKCRKIQFSKKVFDDMGERNSVS-WCSMLA- 236

Query: 575  CRVYGKPELGKIAADKLFE 519
              VY + ++G++A    F+
Sbjct: 237  --VYEQNDMGEMACGLFFK 253



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
 Frame = -3

Query: 1673 TGQQLHGLSLKSGLFSDVFVGCSAFDMYCKTGLREDARKVFDEMPERNVATWNAYISNSV 1494
            +G+ +HGL++K+ +  ++FVG +  DMY K G  ED  + F  +P RN+  WNA I    
Sbjct: 281  SGRVVHGLAVKACIEENIFVGSALVDMYGKCGSIEDCERAFFMLPNRNLICWNALIGGYA 340

Query: 1493 FEGRTREAFCTFVEFRVLGGEGNSITYCAVLNGCSDTGDVVLGRQIHGFL-IRSGCDRDV 1317
             +GR   A      FR +    N +T+  VL  CS  G V  G  I   +  + G +   
Sbjct: 341  HQGR---ADVALELFREMTYPPNYVTFVCVLTACSRGGLVSEGLDIFDSMKSKYGVNPGA 397

Query: 1316 SVGNGLVDFYGKCGEIESAEMVFSGMSLRNVVS-WCSMVAVYQQNDEEEKACVA 1158
                 +VD  G+ G++E A      M +R  +S W +++   + + + E   +A
Sbjct: 398  EHYACVVDMLGRAGQVERAHSFIQQMRIRPTISIWGALLGACKMHGKSELGKIA 451