BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027452
         (563 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007029783.1| Uncharacterized protein TCM_025656 [Theobrom...    42   3e-06
ref|XP_007052567.1| Gag-pol polyprotein, putative [Theobroma cac...    42   3e-06
ref|XP_007028192.1| Uncharacterized protein TCM_023754 [Theobrom...    42   8e-06

>ref|XP_007029783.1| Uncharacterized protein TCM_025656 [Theobroma cacao]
           gi|508718388|gb|EOY10285.1| Uncharacterized protein
           TCM_025656 [Theobroma cacao]
          Length = 505

 Score = 42.4 bits (98), Expect(2) = 3e-06
 Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
 Frame = +2

Query: 473 KKGSEIKVNKRCLVPFKV-EKYKDEVWCFI 559
           +KG+E+KV KRC V F +  KY+DEVWC I
Sbjct: 277 RKGNEVKVTKRCCVQFSIGNKYEDEVWCDI 306



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
 Frame = +3

Query: 324 GRLCNVITNSGSSENTTSIDM-----LRS*GSYKPFNIQWPHKGSEI 449
           G++CNVI +SGS EN  +  M     L++     P+ +QW  KG+E+
Sbjct: 236 GKVCNVIIDSGSCENVIANYMVEKLKLQTEVHPHPYKLQWLRKGNEV 282


>ref|XP_007052567.1| Gag-pol polyprotein, putative [Theobroma cacao]
           gi|508704828|gb|EOX96724.1| Gag-pol polyprotein,
           putative [Theobroma cacao]
          Length = 794

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = +2

Query: 473 KKGSEIKVNKRCLVPFKV-EKYKDEVWC 553
           +KG+E+KV KRC V F +  KY+DEVWC
Sbjct: 428 RKGNEVKVTKRCCVQFSIGNKYEDEVWC 455



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
 Frame = +3

Query: 324 GRLCNVITNSGSSENTTSIDM-----LRS*GSYKPFNIQWPHKGSEI 449
           G++CNVI +SGS EN  +  M     L++     P+ +QW  KG+E+
Sbjct: 387 GKVCNVIIDSGSCENVIANYMVKKLKLQTEVHPHPYKLQWLRKGNEV 433


>ref|XP_007028192.1| Uncharacterized protein TCM_023754 [Theobroma cacao]
           gi|508716797|gb|EOY08694.1| Uncharacterized protein
           TCM_023754 [Theobroma cacao]
          Length = 440

 Score = 42.0 bits (97), Expect(2) = 8e-06
 Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = +2

Query: 473 KKGSEIKVNKRCLVPFKV-EKYKDEVWC 553
           +KG+E+KV KRC V F +  KY+DEVWC
Sbjct: 212 RKGNEVKVTKRCCVQFSIGSKYEDEVWC 239



 Score = 33.5 bits (75), Expect(2) = 8e-06
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
 Frame = +3

Query: 324 GRLCNVITNSGSSENTTSIDM-----LRS*GSYKPFNIQWPHKGSEI 449
           G++CNVI +SGS EN  +  M     L +     P+ +QW  KG+E+
Sbjct: 171 GKVCNVIIDSGSCENVIANYMVEKLKLPTEVHPHPYKLQWLRKGNEV 217