BLASTX nr result
ID: Cocculus23_contig00027445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00027445
(721 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis] 212 9e-53
ref|XP_002325518.2| pentatricopeptide repeat-containing family p... 211 2e-52
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi... 211 2e-52
ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containi... 211 3e-52
ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containi... 208 1e-51
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,... 208 1e-51
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi... 206 8e-51
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi... 206 8e-51
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ... 205 1e-50
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi... 205 1e-50
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ... 204 2e-50
ref|XP_007032385.1| Pentatricopeptide repeat (PPR-like) superfam... 203 4e-50
ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutr... 202 9e-50
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps... 202 9e-50
ref|XP_007139658.1| hypothetical protein PHAVU_008G048400g [Phas... 200 5e-49
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar... 198 2e-48
ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containi... 190 4e-46
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi... 184 3e-44
ref|XP_006854875.1| hypothetical protein AMTR_s00182p00046810 [A... 151 2e-34
ref|XP_007019860.1| Pentatricopeptide repeat (PPR-like) superfam... 146 6e-33
>gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]
Length = 647
Score = 212 bits (540), Expect = 9e-53
Identities = 101/159 (63%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Frame = -2
Query: 477 PAKKPHKK--FSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIP 304
P K+ K+ F+++DAFP+SLPLHSKNP ++Y DIQRFARQ+KL +ALTILDY+D+QGIP
Sbjct: 11 PGKRRRKRPVFTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIP 70
Query: 303 VNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKL 124
VNPTTF++LIAAC+RTKSL HG+ VH I IN L NEFL KLVHMYTSCG++++A L
Sbjct: 71 VNPTTFAALIAACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNL 130
Query: 123 FDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTY 7
FD SVYPWN+L+RG V+ GG RYRD STY
Sbjct: 131 FD-----ESPSRSVYPWNALLRGNVISGGRRYRDALSTY 164
>ref|XP_002325518.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317217|gb|EEE99899.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 678
Score = 211 bits (538), Expect = 2e-52
Identities = 101/188 (53%), Positives = 138/188 (73%)
Frame = -2
Query: 564 PKFPIQIHKTPSSLLQIQQHPNNKFLKQFPAKKPHKKFSQEDAFPQSLPLHSKNPSSIYK 385
P+ P+ I+ T +I+ + ++ K H++F + DAFP SLPLH KNP +IYK
Sbjct: 14 PQNPLNINITHRQFSKIKSSTQTQPVQTQNPNKKHQQFDERDAFPASLPLHKKNPQAIYK 73
Query: 384 DIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININS 205
DIQRF+R+++LK+AL I+DY+D+QGIPVNPTTFS+LIAACIR+KSL+ + +HTH+ IN
Sbjct: 74 DIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKAKEIHTHLRING 133
Query: 204 LQNNEFLLAKLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYR 25
LQNNEFL KLVHMYTSCG+IE+A+ +FD + ++VYPWN+L+RG V+ G RY
Sbjct: 134 LQNNEFLRTKLVHMYTSCGSIEDAKSVFD----ECTSTATVYPWNALIRGTVISGKKRYG 189
Query: 24 DVFSTYSK 1
DV S Y +
Sbjct: 190 DVLSAYQE 197
>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 211 bits (538), Expect = 2e-52
Identities = 108/192 (56%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
Frame = -2
Query: 567 PPKFPIQIHKTPSSLLQIQQHPNNKFLKQFPA--KKPHKK-FSQEDAFPQSLPLHSKNPS 397
P P+Q + Q P+ QF K P KK FS++DAFP SLPLH+KNP
Sbjct: 58 PISLPLQSKNPHAIYSDNQTTPSRPTQTQFRTRLKSPKKKPFSEKDAFPMSLPLHTKNPH 117
Query: 396 SIYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHI 217
+I+ DIQRFARQ KLKEALTILDY D+QGIPVNPTTFSSL+ AC+ +KSL+HG+ +H HI
Sbjct: 118 AIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHI 177
Query: 216 NINSLQNNEFLLAKLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGG 37
IN L+NNEFL KLVHMYTSCG++E+A +FDG + SVY WN+L+RG V+ G
Sbjct: 178 RINGLENNEFLRTKLVHMYTSCGSLEDARGVFDG-----VSSKSVYTWNALLRGNVISGR 232
Query: 36 WRYRDVFSTYSK 1
YR+ STYS+
Sbjct: 233 RHYREALSTYSE 244
>ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cicer arietinum]
Length = 694
Score = 211 bits (536), Expect = 3e-52
Identities = 117/191 (61%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Frame = -2
Query: 567 PPKFPIQIHKTPSSLLQIQQHPNNKFLKQFPAKKPHKKFSQEDAFPQSLPLHSKNPSSIY 388
PP HK S + N + K F +EDAFP SLPLH+KNP IY
Sbjct: 34 PPSITTTTHKKKSPKFTTTTNKNKNISE--------KPFLEEDAFPCSLPLHNKNPLFIY 85
Query: 387 KDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININ 208
KDI+ FARQ+KLKEALTILDY+D+QGIPVN TTFSSLIAACIRT SLS GR VHTHI IN
Sbjct: 86 KDIKNFARQNKLKEALTILDYVDQQGIPVNATTFSSLIAACIRTNSLSIGRQVHTHIRIN 145
Query: 207 SLQNNEFLLAKLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWR- 31
LQNN FL KLV MYTSCG+ E+A KLFD S + SSVYPWN+L+RG VV GG R
Sbjct: 146 GLQNNLFLKTKLVQMYTSCGSFEDAVKLFDE---SFQSESSVYPWNALLRGSVVSGGKRK 202
Query: 30 -YRDVFSTYSK 1
Y DV TYSK
Sbjct: 203 QYIDVLKTYSK 213
>ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Citrus sinensis]
Length = 681
Score = 208 bits (530), Expect = 1e-51
Identities = 103/162 (63%), Positives = 124/162 (76%), Gaps = 2/162 (1%)
Frame = -2
Query: 480 FPAKKPH--KKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGI 307
F +K H KK +++DAFP SLPLH KNP +IYKDIQRFARQ+KLKEAL ILDY+D+QGI
Sbjct: 44 FQKRKKHHTKKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGI 103
Query: 306 PVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEK 127
PVN TTF++LI AC+RT+SL GRL+HTHI IN L+NN FL KLV MYTSCG+ E+AEK
Sbjct: 104 PVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEK 163
Query: 126 LFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
+FD + SVYPWN+L+RG V+ G RYRDV Y K
Sbjct: 164 VFD-----ESSSESVYPWNALLRGAVIAGKKRYRDVLFNYMK 200
>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 456
Score = 208 bits (530), Expect = 1e-51
Identities = 98/166 (59%), Positives = 127/166 (76%)
Frame = -2
Query: 498 NKFLKQFPAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLD 319
N++L+ KK +F ++DAFP SLPLH+KNPS++YKDIQRF RQ+KLKEAL I+DYL+
Sbjct: 48 NRYLRYHNIKKRKSRFREKDAFPSSLPLHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLE 107
Query: 318 KQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIE 139
+QGIPVN TTFS+LIAACIR+KSL H + +H HI IN L+NNEFL KLV +YTSCG+ E
Sbjct: 108 QQGIPVNATTFSALIAACIRSKSLDHAKQIHAHIRINGLENNEFLRTKLVSLYTSCGSFE 167
Query: 138 EAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
+A+ +F + +SVYPWN+L+RG V+ GG RY DV S Y +
Sbjct: 168 DAKMVFG----ECTSSTSVYPWNALLRGTVISGGKRYNDVVSAYGQ 209
>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 206 bits (523), Expect = 8e-51
Identities = 100/179 (55%), Positives = 135/179 (75%)
Frame = -2
Query: 537 TPSSLLQIQQHPNNKFLKQFPAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQD 358
TP S ++I N+ K+P F+++DAFP SLPLH+KNP +IY+D+QRFARQ+
Sbjct: 43 TPPSKIKIVSKFRNR-------KRP--TFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQN 93
Query: 357 KLKEALTILDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLA 178
KLKEALTI+DY+D+QGIPVN TTFSSLI AC+RTKS+++ + +H HI IN L+NNEF+
Sbjct: 94 KLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRT 153
Query: 177 KLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
+LVHMYT+CG++EEA+KLFD + SVYPWN+L+RG V+ G YR + STY++
Sbjct: 154 RLVHMYTACGSLEEAQKLFD-----ESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAE 207
>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 206 bits (523), Expect = 8e-51
Identities = 100/179 (55%), Positives = 135/179 (75%)
Frame = -2
Query: 537 TPSSLLQIQQHPNNKFLKQFPAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQD 358
TP S ++I N+ K+P F+++DAFP SLPLH+KNP +IY+D+QRFARQ+
Sbjct: 43 TPPSKIKIVSKFRNR-------KRP--TFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQN 93
Query: 357 KLKEALTILDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLA 178
KLKEALTI+DY+D+QGIPVN TTFSSLI AC+RTKS+++ + +H HI IN L+NNEF+
Sbjct: 94 KLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRT 153
Query: 177 KLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
+LVHMYT+CG++EEA+KLFD + SVYPWN+L+RG V+ G YR + STY++
Sbjct: 154 RLVHMYTACGSLEEAQKLFD-----ESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAE 207
>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505290|gb|AES86432.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 688
Score = 205 bits (522), Expect = 1e-50
Identities = 110/170 (64%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
Frame = -2
Query: 504 PNNKFLKQFPAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDY 325
PN K KKP FS+EDAFP SLPLH+KNP SIYKDI+ FARQ+KL EAL ILDY
Sbjct: 45 PNKNNNKNNNVKKP---FSEEDAFPCSLPLHNKNPISIYKDIKNFARQNKLNEALAILDY 101
Query: 324 LDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGA 145
+D+ GIPVN TTFSSLIAACIRT SLS G+ +HTHI IN L+ N FLL KLV MYTSCG+
Sbjct: 102 VDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGS 161
Query: 144 IEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWR--YRDVFSTYSK 1
+E+A KLFD SSVYPWN+L+RG VV GG + Y DV TYSK
Sbjct: 162 LEDALKLFD----ELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSK 207
>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 205 bits (521), Expect = 1e-50
Identities = 102/157 (64%), Positives = 126/157 (80%)
Frame = -2
Query: 471 KKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVNPT 292
KKP K F+++DAFP SLPLH+KNP I+KDI+RFARQ+KLKEALTILDY+D++GIPV+ T
Sbjct: 56 KKP-KPFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDAT 114
Query: 291 TFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFDGG 112
TFSS++AACIR KSL GR VHTHI IN L+NN FL KLVHMYT+CG++E+A+KLFDG
Sbjct: 115 TFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDG- 173
Query: 111 GFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
SVYPWN+L+RG VV G +Y DV TY++
Sbjct: 174 ----LPCESVYPWNALLRGTVVSGKRQYIDVLKTYTE 206
>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334679|gb|EFH65097.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 688
Score = 204 bits (520), Expect = 2e-50
Identities = 97/159 (61%), Positives = 128/159 (80%)
Frame = -2
Query: 477 PAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVN 298
PAKKP K F + DAFP SLPLHSKNP SI++DIQRFAR++ L++ALTILDYL+++GIPVN
Sbjct: 51 PAKKP-KPFRERDAFPSSLPLHSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVN 109
Query: 297 PTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFD 118
TTFS+L+AAC+R KSL HG+ VH HI IN L++NEF+ KLVHMYT+CG++ +A+K+FD
Sbjct: 110 ATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVFD 169
Query: 117 GGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
T S+VY WN+L+RG V+ G RY+DV ST+++
Sbjct: 170 -----ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 203
>ref|XP_007032385.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508711414|gb|EOY03311.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 683
Score = 203 bits (517), Expect = 4e-50
Identities = 98/160 (61%), Positives = 126/160 (78%)
Frame = -2
Query: 480 FPAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPV 301
F ++ F +++AFP SLPLH+KNP +IYKDIQRFARQ+KLKEAL ILDY+D+QGIPV
Sbjct: 48 FAHRRSPPPFFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPV 107
Query: 300 NPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLF 121
NPTTFSSL+AAC+R+KSL+ GR +H+HI N L+NNEFL AKL HMYTSCG+I++A ++F
Sbjct: 108 NPTTFSSLLAACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVF 167
Query: 120 DGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
D T +V+ WN+L+RG V+ G RY DV STYS+
Sbjct: 168 D-----ECTSKNVHSWNALLRGTVISGKKRYLDVLSTYSE 202
>ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
gi|557087203|gb|ESQ28055.1| hypothetical protein
EUTSA_v10019712mg [Eutrema salsugineum]
Length = 688
Score = 202 bits (514), Expect = 9e-50
Identities = 99/159 (62%), Positives = 127/159 (79%)
Frame = -2
Query: 477 PAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVN 298
PAK P K F + DAFP SLPLHSKNP I++DIQ FARQ+KL++ALTILDYL+++GIPVN
Sbjct: 51 PAKNP-KPFRERDAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVN 109
Query: 297 PTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFD 118
TTFS+L+AAC+R KSLS G+ VH HI IN L+NNEFL KLVHMYT+CG+I++A+K+FD
Sbjct: 110 ATTFSALLAACVRRKSLSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKVFD 169
Query: 117 GGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
T S+VY WN+L+RG V+ G RY+DV ST+++
Sbjct: 170 -----ESTSSNVYSWNALLRGTVISGKRRYQDVLSTFAE 203
>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
gi|482569787|gb|EOA33975.1| hypothetical protein
CARUB_v10021470mg [Capsella rubella]
Length = 688
Score = 202 bits (514), Expect = 9e-50
Identities = 96/159 (60%), Positives = 128/159 (80%)
Frame = -2
Query: 477 PAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVN 298
PA+KP K F + DAFP SLPLHSKNP SI++DIQ FAR++ L++ALTILDYL+++GIPVN
Sbjct: 51 PARKP-KPFRERDAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVN 109
Query: 297 PTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFD 118
TTFS+L+AAC+R KSL HG+ VH HI IN L++NEFL KLVHMYT+CG++++A+K+FD
Sbjct: 110 ATTFSALLAACVRRKSLIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFD 169
Query: 117 GGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
T S+VY WN+L+RG V+ G RY+DV ST+++
Sbjct: 170 -----ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 203
>ref|XP_007139658.1| hypothetical protein PHAVU_008G048400g [Phaseolus vulgaris]
gi|561012791|gb|ESW11652.1| hypothetical protein
PHAVU_008G048400g [Phaseolus vulgaris]
Length = 674
Score = 200 bits (508), Expect = 5e-49
Identities = 105/172 (61%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Frame = -2
Query: 507 HPNNKFLKQFPAKKPHKK---FSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALT 337
HP P K+ KK F+++DAFP SLPLH+KNP IYKDI+RFARQ+KLKEALT
Sbjct: 32 HPRRPPRFTTPRKQRTKKVKPFTEKDAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEALT 91
Query: 336 ILDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYT 157
ILDY+D++GIPV+ TTFS++IAACIRTKSL GR VH HI IN L+NN FL KLV MYT
Sbjct: 92 ILDYVDQRGIPVDSTTFSAVIAACIRTKSLPQGREVHIHIRINGLENNVFLRTKLVQMYT 151
Query: 156 SCGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
SCG++EEA+KLF+G SVYPWN+L+RG VV G +Y DV TY++
Sbjct: 152 SCGSLEEAQKLFEG-----LPCESVYPWNALLRGTVVSGERQYIDVLKTYAE 198
>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic; Flags: Precursor
gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
45757-47826 [Arabidopsis thaliana]
gi|332197082|gb|AEE35203.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 198 bits (503), Expect = 2e-48
Identities = 96/159 (60%), Positives = 125/159 (78%)
Frame = -2
Query: 477 PAKKPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVN 298
PAKKP K F + DAFP SLPLHSKNP I++DIQ FARQ+ L+ ALTILDYL+++GIPVN
Sbjct: 52 PAKKP-KPFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVN 110
Query: 297 PTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFD 118
TTFS+L+ AC+R KSL HG+ VH HI IN L++NEFL KLVHMYT+CG++++A+K+FD
Sbjct: 111 ATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFD 170
Query: 117 GGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
T S+VY WN+L+RG V+ G RY+DV ST+++
Sbjct: 171 -----ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
>ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 683
Score = 190 bits (483), Expect = 4e-46
Identities = 96/171 (56%), Positives = 124/171 (72%), Gaps = 3/171 (1%)
Frame = -2
Query: 504 PNNKFLKQFPAKKPHKK---FSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTI 334
P+++ + H+K F + DAFP+SLPLH+KNP ++YKDIQRFA Q+KL EALTI
Sbjct: 37 PHHRAFNLHALSRRHRKPPSFEERDAFPESLPLHTKNPRAVYKDIQRFAAQNKLNEALTI 96
Query: 333 LDYLDKQGIPVNPTTFSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTS 154
LDYLD+QGIPVN TTFS LI AC+RT+SL G+ +H +I IN L+++EFL KLV+MYTS
Sbjct: 97 LDYLDQQGIPVNATTFSHLITACVRTRSLDTGKKIHKYIWINGLESSEFLRQKLVNMYTS 156
Query: 153 CGAIEEAEKLFDGGGFSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYSK 1
GA+++A LFD +VY WN+L+RG VV GG RYRDV TYS+
Sbjct: 157 FGAVDDAHHLFD-----QMPGKNVYTWNALLRGTVVAGGKRYRDVLETYSE 202
>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Solanum lycopersicum]
Length = 674
Score = 184 bits (466), Expect = 3e-44
Identities = 90/155 (58%), Positives = 117/155 (75%)
Frame = -2
Query: 468 KPHKKFSQEDAFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTT 289
K K+ + + L +H+KNP +IYKDIQRFA Q+KLKEALTILDYLD +GIPVNPTT
Sbjct: 43 KEPSKYPKHNNLRNLLSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTT 102
Query: 288 FSSLIAACIRTKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFDGGG 109
F+SLIAAC+R KSL+ ++VHTH+ IN L+NNEFL K+V+MY +CG+IE+A+K+FD
Sbjct: 103 FASLIAACVRLKSLTSAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFD--- 159
Query: 108 FSAGTRSSVYPWNSLMRGKVVHGGWRYRDVFSTYS 4
SVYPWN+L+RG VV GG +Y +V T+S
Sbjct: 160 --KMPVRSVYPWNALLRGNVVLGGSKYGEVLGTFS 192
>ref|XP_006854875.1| hypothetical protein AMTR_s00182p00046810 [Amborella trichopoda]
gi|548858580|gb|ERN16342.1| hypothetical protein
AMTR_s00182p00046810 [Amborella trichopoda]
Length = 752
Score = 151 bits (381), Expect = 2e-34
Identities = 88/201 (43%), Positives = 117/201 (58%), Gaps = 15/201 (7%)
Frame = -2
Query: 570 QPPKFPIQIHK-TPSSLLQIQQHPNN-----KFLKQFPAKKPHK---------KFSQEDA 436
+PPK+P + K T + ++ H + K LK K PH KF +
Sbjct: 72 KPPKYPTKPPKNTKQNHNSLKLHTTSIAKKPKTLKPIEQKNPHSLQFYPASIAKFPKP-L 130
Query: 435 FPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLIAACIRT 256
P+SLPLHSKNP++IYKDI+ +R+ KLK+ALT+LDY K GIP+NPT FSSLI AC
Sbjct: 131 NPRSLPLHSKNPTTIYKDIKTLSRKQKLKQALTVLDYATKFGIPINPTAFSSLITACTMA 190
Query: 255 KSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVYP 76
K L GR H H+ + L +NEFL +LV MY +CGA E+A L S S+ +
Sbjct: 191 KDLQAGRHAHAHLRASGLADNEFLRVRLVRMYAACGAPEDARTL-----LSLLPLSTPHA 245
Query: 75 WNSLMRGKVVHGGWRYRDVFS 13
WN+L+RG VV GG R +D +
Sbjct: 246 WNALLRGAVVRGGRRMQDALA 266
>ref|XP_007019860.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
[Theobroma cacao] gi|508725188|gb|EOY17085.1|
Pentatricopeptide repeat (PPR-like) superfamily protein,
putative [Theobroma cacao]
Length = 431
Score = 146 bits (369), Expect = 6e-33
Identities = 89/206 (43%), Positives = 115/206 (55%), Gaps = 16/206 (7%)
Frame = -2
Query: 570 QPPKFPIQIHKTPSSLLQIQQHPNNKFLK------------QFPAKKPHKK----FSQED 439
Q P + +H +P + L + NN+F K + P K H++ F ++
Sbjct: 5 QSPSLSLCLHSSPPNPLFYR---NNQFSKIKASARSPPKPQKDPTKFTHRRSPPPFFEKY 61
Query: 438 AFPQSLPLHSKNPSSIYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLIAACIR 259
AFP LPLH+KNP +IYKDIQRFARQ+KLKEAL ILDY+++QGIPVNPTTFSSL+AAC+R
Sbjct: 62 AFPSPLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVNQQGIPVNPTTFSSLLAACVR 121
Query: 258 TKSLSHGRLVHTHININSLQNNEFLLAKLVHMYTSCGAIEEAEKLFDGGGFSAGTRSSVY 79
+KSL+ G+ +H HI N L+NNEFL K H Y
Sbjct: 122 SKSLADGKQIHVHIRTNGLKNNEFLRTK--HAYI-------------------------- 153
Query: 78 PWNSLMRGKVVHGGWRYRDVFSTYSK 1
G V+ G RY DV STYS+
Sbjct: 154 -------GTVISGKKRYLDVLSTYSE 172