BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027247
         (456 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006303549.1| hypothetical protein CARUB_v10011006mg [Caps...    56   5e-06
ref|NP_173207.1| pentatricopeptide repeat-containing protein [Ar...    55   8e-06

>ref|XP_006303549.1| hypothetical protein CARUB_v10011006mg [Capsella rubella]
           gi|482572260|gb|EOA36447.1| hypothetical protein
           CARUB_v10011006mg [Capsella rubella]
          Length = 728

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/59 (40%), Positives = 38/59 (64%)
 Frame = -3

Query: 181 LCCNISHSIDYARRDVGEELHGYVVKMGFSERVIVQTALIDMYCPCGLSNCGRQVFDRI 5
           +CC +S   +    ++G E+HG+VV+   S+ ++VQ AL++MY  CGL N G  VF+ I
Sbjct: 437 ICCILSICAELPALNLGREIHGHVVRTSMSDNILVQNALVNMYTKCGLLNEGSLVFEAI 495


>ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g17630 gi|8778465|gb|AAF79473.1|AC022492_17
           F1L3.33 [Arabidopsis thaliana]
           gi|332191495|gb|AEE29616.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 731

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/59 (38%), Positives = 38/59 (64%)
 Frame = -3

Query: 181 LCCNISHSIDYARRDVGEELHGYVVKMGFSERVIVQTALIDMYCPCGLSNCGRQVFDRI 5
           +CC +S   +    ++G E+HG+V++   SE ++VQ AL++MY  CGL + G  VF+ I
Sbjct: 437 ICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495