BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027058
         (917 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   353   7e-95
ref|XP_006439095.1| hypothetical protein CICLE_v10031578mg [Citr...   347   4e-93
ref|XP_006838299.1| hypothetical protein AMTR_s00103p00116510 [A...   345   2e-92
ref|XP_007052507.1| FMN-linked oxidoreductases superfamily prote...   345   2e-92
ref|XP_004506326.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   340   6e-91
ref|XP_006345439.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synt...   339   8e-91
ref|XP_006439094.1| hypothetical protein CICLE_v10031578mg [Citr...   339   1e-90
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   339   1e-90
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              339   1e-90
ref|XP_007131391.1| hypothetical protein PHAVU_011G009800g [Phas...   338   2e-90
ref|XP_004229635.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   337   3e-90
ref|XP_004306546.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   337   5e-90
ref|XP_003531118.1| PREDICTED: uncharacterized tRNA-dihydrouridi...   337   5e-90
ref|XP_007052508.1| FMN-linked oxidoreductases superfamily prote...   335   1e-89
ref|XP_004306547.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   335   1e-89
ref|XP_004975107.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...   334   3e-89
ref|XP_002298425.2| hypothetical protein POPTR_0001s27210g [Popu...   333   6e-89
gb|ACN33393.1| unknown [Zea mays]                                     332   1e-88
ref|NP_001141027.1| uncharacterized protein LOC100273106 [Zea ma...   332   1e-88
ref|XP_003599260.1| tRNA-dihydrouridine synthase A [Medicago tru...   331   3e-88

>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  353 bits (905), Expect = 7e-95
 Identities = 178/250 (71%), Positives = 197/250 (78%), Gaps = 11/250 (4%)
 Frame = +1

Query: 199 MIKSAVYPFLASLPPIYYCCSVKKHHRRSFNRFYCHSVECNS------KH-----VKSAE 345
           M+KSA Y   AS  PI+    +K H R S N  Y +S +  +      KH     V    
Sbjct: 1   MMKSAGYTLTASFNPIHSII-LKNHRRLSLNILYGNSAKSKNSTAYIRKHQLHTKVVMVA 59

Query: 346 RRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPE 525
            +YLPPWFSVAPMMDWT+NHYRTLARLISKHAWLYTEM+ AETIV+QE NLDRFL F P+
Sbjct: 60  GQYLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPD 119

Query: 526 QHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVA 705
           QHPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHGCFG RLML+PKFVA
Sbjct: 120 QHPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVA 179

Query: 706 EAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGIS 885
           EAMS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGIS
Sbjct: 180 EAMSVIAANSDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGIS 239

Query: 886 PAANRKIPPL 915
           PA NRKIPPL
Sbjct: 240 PADNRKIPPL 249


>ref|XP_006439095.1| hypothetical protein CICLE_v10031578mg [Citrus clementina]
           gi|567893151|ref|XP_006439096.1| hypothetical protein
           CICLE_v10031578mg [Citrus clementina]
           gi|567893155|ref|XP_006439098.1| hypothetical protein
           CICLE_v10031578mg [Citrus clementina]
           gi|568858647|ref|XP_006482859.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X1 [Citrus sinensis]
           gi|568858649|ref|XP_006482860.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X2 [Citrus sinensis]
           gi|568858651|ref|XP_006482861.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X3 [Citrus sinensis] gi|557541291|gb|ESR52335.1|
           hypothetical protein CICLE_v10031578mg [Citrus
           clementina] gi|557541292|gb|ESR52336.1| hypothetical
           protein CICLE_v10031578mg [Citrus clementina]
           gi|557541294|gb|ESR52338.1| hypothetical protein
           CICLE_v10031578mg [Citrus clementina]
          Length = 436

 Score =  347 bits (890), Expect = 4e-93
 Identities = 174/250 (69%), Positives = 196/250 (78%), Gaps = 11/250 (4%)
 Frame = +1

Query: 199 MIKSAVYPFLASLPPIYYCCSVKKHHRRSFNRFYCHSVECNSK---------HVKS--AE 345
           M+K A    ++S  P +    +KKH R S N F+ +S    S          H K+    
Sbjct: 5   MVKFAGSSLISSFTP-FDSVLLKKHRRFSVNSFFKNSNNPRSLSTCTQNIILHTKAEMVA 63

Query: 346 RRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPE 525
            +YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEM+ AETI++Q+GNLDRFL+F PE
Sbjct: 64  SQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPE 123

Query: 526 QHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVA 705
           QHPI+LQIGGSNL+NLAKA  LAN YNYD INLNCGCPS KVAGHGCFG  LML+PKFV 
Sbjct: 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVG 183

Query: 706 EAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGIS 885
           EAMS IA N + PVSVKCRIGVD+HDSYN+LCDFIYKV+S SPTRHFIIH+RKALLNGIS
Sbjct: 184 EAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGIS 243

Query: 886 PAANRKIPPL 915
           PA NR IPPL
Sbjct: 244 PAENRTIPPL 253


>ref|XP_006838299.1| hypothetical protein AMTR_s00103p00116510 [Amborella trichopoda]
           gi|548840767|gb|ERN00868.1| hypothetical protein
           AMTR_s00103p00116510 [Amborella trichopoda]
          Length = 421

 Score =  345 bits (884), Expect = 2e-92
 Identities = 169/239 (70%), Positives = 190/239 (79%)
 Frame = +1

Query: 199 MIKSAVYPFLASLPPIYYCCSVKKHHRRSFNRFYCHSVECNSKHVKSAERRYLPPWFSVA 378
           M+K AV   L S  P +      K HRRS+      S++     +    R+YLPPWFSVA
Sbjct: 1   MMKCAVNVLLVSSTPSH--SFGLKRHRRSYIMLNWKSLKHGISSISG--RKYLPPWFSVA 56

Query: 379 PMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGS 558
           PMMDWTDNHYRTLARLISKHAWLYTEM+VAETIVHQ+ NLDRFL+F P QHPI+LQIGGS
Sbjct: 57  PMMDWTDNHYRTLARLISKHAWLYTEMIVAETIVHQKENLDRFLAFSPSQHPIVLQIGGS 116

Query: 559 NLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCD 738
           NLENLAKA  LAN Y+YD INLNCGCPSGKVAGHGCFG +LM NPKFV EAMSAIA NC 
Sbjct: 117 NLENLAKATELANSYSYDEINLNCGCPSGKVAGHGCFGVQLMYNPKFVGEAMSAIAANCS 176

Query: 739 APVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPL 915
            PVSVKCRIGVD+ D+Y+ELCDF+Y VA+ SPTRHFIIH+RKALL G+SPA NR +PPL
Sbjct: 177 VPVSVKCRIGVDDRDTYDELCDFVYTVATHSPTRHFIIHSRKALLKGLSPAENRTVPPL 235


>ref|XP_007052507.1| FMN-linked oxidoreductases superfamily protein isoform 1 [Theobroma
           cacao] gi|508704768|gb|EOX96664.1| FMN-linked
           oxidoreductases superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 436

 Score =  345 bits (884), Expect = 2e-92
 Identities = 171/250 (68%), Positives = 198/250 (79%), Gaps = 11/250 (4%)
 Frame = +1

Query: 199 MIKSAVYPFLASLPPIYYCCSVKKHHRRSFNRFYCHSVECN--SKHVKSAE--------- 345
           M+K + Y  + S     +  ++K H R S N  Y +S +    S + ++A+         
Sbjct: 1   MVKFSAYSLMISSFTPLHSVTLKNHRRFSINIPYNYSTKARTISSYTQNAQIHTEDAMVA 60

Query: 346 RRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPE 525
           RRYLPP FSVAPMM+WTDNHYRTLARLISKHAWLYTEM+ AETIV+Q+GNLDRFL++ PE
Sbjct: 61  RRYLPPLFSVAPMMEWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPE 120

Query: 526 QHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVA 705
           QHPI+LQIGG+NLENLAKA  LAN Y+YD IN NCGCPS KVAGHGCFG RLML+PKFV 
Sbjct: 121 QHPIVLQIGGNNLENLAKATELANAYHYDEINFNCGCPSPKVAGHGCFGVRLMLDPKFVG 180

Query: 706 EAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGIS 885
           EAMS IA N + PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGIS
Sbjct: 181 EAMSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIHSRKALLNGIS 240

Query: 886 PAANRKIPPL 915
           PA NR+IPPL
Sbjct: 241 PADNRRIPPL 250


>ref|XP_004506326.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform X2 [Cicer
           arietinum]
          Length = 431

 Score =  340 bits (871), Expect = 6e-91
 Identities = 165/221 (74%), Positives = 187/221 (84%), Gaps = 2/221 (0%)
 Frame = +1

Query: 259 SVKKHHRRSF--NRFYCHSVECNSKHVKSAERRYLPPWFSVAPMMDWTDNHYRTLARLIS 432
           S+ + +RR+   +RF+    E   KH   A + YLPPWFSVAPMMDWTDNHYRTLARLIS
Sbjct: 31  SIFRRNRRNLRSSRFFSVKQEAYDKHGVVA-KHYLPPWFSVAPMMDWTDNHYRTLARLIS 89

Query: 433 KHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYNYD 612
           KHAWLYTEM+ AETIVHQ+ NLDRFL++ PEQHPI+LQIGG N+ENLAKA  LAN Y YD
Sbjct: 90  KHAWLYTEMLAAETIVHQKDNLDRFLAYSPEQHPIVLQIGGGNVENLAKATELANAYCYD 149

Query: 613 AINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDSYN 792
            INLNCGCPS +VAGHGCFG RLML+PKFVAEAMSAIA N + PVSVKCRIGVD+HDSY+
Sbjct: 150 EINLNCGCPSPRVAGHGCFGVRLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYD 209

Query: 793 ELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPL 915
           ELCDFI+KV+S SPT+HFIIH+RKALLNGISPA NR IPPL
Sbjct: 210 ELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPL 250


>ref|XP_006345439.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
           [Solanum tuberosum]
          Length = 427

 Score =  339 bits (870), Expect = 8e-91
 Identities = 178/249 (71%), Positives = 197/249 (79%), Gaps = 11/249 (4%)
 Frame = +1

Query: 202 IKSAVYPFLASLPPIYYCCSVKKHHRRSFNRFYCHSVE----C----NSK-HVKS--AER 348
           +KSA +  +AS+ P +   SV +  R S N FY  S +    C    NSK H  S  A  
Sbjct: 1   MKSAGHCLIASITPFH---SVIRFGRFSSNLFYGSSSKPRTLCAYHQNSKLHSASLMAAE 57

Query: 349 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 528
           RY PPWFSVAPMMDWTDNHYRTLARLISK AWLYTEM+ AETIV+Q GNLDRFL++ PEQ
Sbjct: 58  RYPPPWFSVAPMMDWTDNHYRTLARLISKKAWLYTEMIAAETIVYQTGNLDRFLAYGPEQ 117

Query: 529 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 708
           HPI+LQIGG+ LENLAKA  LA  Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAE
Sbjct: 118 HPIVLQIGGNKLENLAKATQLATPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE 177

Query: 709 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 888
           AMS IA N + PVSVKCRIGVD+HDSYNELCDFIY+V+S SPTRHFIIH+RKALLNGISP
Sbjct: 178 AMSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYEVSSQSPTRHFIIHSRKALLNGISP 237

Query: 889 AANRKIPPL 915
           A NRKIPPL
Sbjct: 238 ADNRKIPPL 246


>ref|XP_006439094.1| hypothetical protein CICLE_v10031578mg [Citrus clementina]
           gi|568858653|ref|XP_006482862.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X4 [Citrus sinensis]
           gi|568858655|ref|XP_006482863.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X5 [Citrus sinensis] gi|557541290|gb|ESR52334.1|
           hypothetical protein CICLE_v10031578mg [Citrus
           clementina]
          Length = 376

 Score =  339 bits (869), Expect = 1e-90
 Identities = 158/189 (83%), Positives = 172/189 (91%)
 Frame = +1

Query: 349 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 528
           +YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEM+ AETI++Q+GNLDRFL+F PEQ
Sbjct: 5   QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQ 64

Query: 529 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 708
           HPI+LQIGGSNL+NLAKA  LAN YNYD INLNCGCPS KVAGHGCFG  LML+PKFV E
Sbjct: 65  HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGE 124

Query: 709 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 888
           AMS IA N + PVSVKCRIGVD+HDSYN+LCDFIYKV+S SPTRHFIIH+RKALLNGISP
Sbjct: 125 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISP 184

Query: 889 AANRKIPPL 915
           A NR IPPL
Sbjct: 185 AENRTIPPL 193


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score =  339 bits (869), Expect = 1e-90
 Identities = 159/189 (84%), Positives = 172/189 (91%)
 Frame = +1

Query: 349 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 528
           +YLPPWFSVAPMMDWT+NHYRTLARLISKHAWLYTEM+ AETIV+QE NLDRFL F P+Q
Sbjct: 5   QYLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQ 64

Query: 529 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 708
           HPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAE
Sbjct: 65  HPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE 124

Query: 709 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 888
           AMS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISP
Sbjct: 125 AMSVIAANSDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISP 184

Query: 889 AANRKIPPL 915
           A NRKIPPL
Sbjct: 185 ADNRKIPPL 193


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  339 bits (869), Expect = 1e-90
 Identities = 159/189 (84%), Positives = 172/189 (91%)
 Frame = +1

Query: 349 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 528
           +YLPPWFSVAPMMDWT+NHYRTLARLISKHAWLYTEM+ AETIV+QE NLDRFL F P+Q
Sbjct: 51  QYLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQ 110

Query: 529 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 708
           HPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAE
Sbjct: 111 HPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE 170

Query: 709 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 888
           AMS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISP
Sbjct: 171 AMSVIAANSDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISP 230

Query: 889 AANRKIPPL 915
           A NRKIPPL
Sbjct: 231 ADNRKIPPL 239


>ref|XP_007131391.1| hypothetical protein PHAVU_011G009800g [Phaseolus vulgaris]
           gi|561004391|gb|ESW03385.1| hypothetical protein
           PHAVU_011G009800g [Phaseolus vulgaris]
          Length = 431

 Score =  338 bits (866), Expect = 2e-90
 Identities = 169/251 (67%), Positives = 194/251 (77%), Gaps = 12/251 (4%)
 Frame = +1

Query: 199 MIKSAVYPFLASLPPIYYCCSVKKHHRR------SFNRFYCHSVECNSKHVK------SA 342
           M K A Y    S  PI   C++ +++ R        N+F C     ++   +      + 
Sbjct: 1   MTKLAGYSLAVSFAPI--SCNILRNNCRFPLVISRRNKFSCRLFSTHALKAQLHDKPGAV 58

Query: 343 ERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPP 522
            R YLPPWFSVAPMM+WTDNHYRTLARLISKHAWLYTEMV AETIVHQ+ NLDRFL++ P
Sbjct: 59  SRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSP 118

Query: 523 EQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFV 702
           +QHPI+LQIGGSN++NLAKA  LAN Y YD INLNCGCPS KVAGHGCFG  LMLNPKFV
Sbjct: 119 DQHPIVLQIGGSNIKNLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFV 178

Query: 703 AEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGI 882
           AEAMSAIA + + PVSVKCRIGVD+HDSYNELCDFIY+V+S SPT+HFIIH+RKALLNGI
Sbjct: 179 AEAMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGI 238

Query: 883 SPAANRKIPPL 915
           SPA NR IPPL
Sbjct: 239 SPAENRSIPPL 249


>ref|XP_004229635.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Solanum
           lycopersicum]
          Length = 439

 Score =  337 bits (865), Expect = 3e-90
 Identities = 177/249 (71%), Positives = 197/249 (79%), Gaps = 11/249 (4%)
 Frame = +1

Query: 202 IKSAVYPFLASLPPIYYCCSVKKHHRRSFNRFYCHSVE----C----NSK-HVKS--AER 348
           +KSA +  +AS+ P +   SV +  R S N FY  S +    C    NSK H  S  A  
Sbjct: 13  MKSAGHCLIASITPFH---SVIRFGRFSSNLFYGSSSKQRTLCAYHQNSKLHSASLMAAE 69

Query: 349 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 528
           R+ PPWFSVAPMMDWTDNHYRTLARLISK AWLYTEM+ AETIV+Q GNLDRFL++ PEQ
Sbjct: 70  RHPPPWFSVAPMMDWTDNHYRTLARLISKKAWLYTEMIAAETIVYQTGNLDRFLAYGPEQ 129

Query: 529 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 708
           HPI+LQIGG+ LENLAKA  LA  Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAE
Sbjct: 130 HPIVLQIGGNKLENLAKATQLATPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE 189

Query: 709 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 888
           AMS IA N + PVSVKCRIGVD+HDSYNELCDFIY+V+S SPTRHFIIH+RKALLNGISP
Sbjct: 190 AMSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYEVSSHSPTRHFIIHSRKALLNGISP 249

Query: 889 AANRKIPPL 915
           A NRKIPPL
Sbjct: 250 ADNRKIPPL 258


>ref|XP_004306546.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 424

 Score =  337 bits (863), Expect = 5e-90
 Identities = 167/226 (73%), Positives = 183/226 (80%), Gaps = 8/226 (3%)
 Frame = +1

Query: 262 VKKHHRRSFNRFYCHSVECNSKHVKSA--------ERRYLPPWFSVAPMMDWTDNHYRTL 417
           ++   R SFN F   S   +S H + A           YLPP+FSVAPMM+WTD HYRT+
Sbjct: 20  LQTRRRFSFNIFQASS--SSSAHRRPAMVSARNYTHAHYLPPYFSVAPMMEWTDVHYRTM 77

Query: 418 ARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLAN 597
           ARLISKHAWLYTEM+ AETIV+Q+ NLDRFL FPPEQHPI+LQIGGSNLENLAKA  LAN
Sbjct: 78  ARLISKHAWLYTEMLAAETIVYQKDNLDRFLYFPPEQHPIVLQIGGSNLENLAKATQLAN 137

Query: 598 FYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDN 777
            Y YD IN NCGCPS +VAGHGCFGARLML+PKFVAEAMS IA N D PVSVKCRIGVD+
Sbjct: 138 IYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEAMSVIAANTDVPVSVKCRIGVDD 197

Query: 778 HDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPL 915
           HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISPA NR IPPL
Sbjct: 198 HDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPAENRSIPPL 243


>ref|XP_003531118.1| PREDICTED: uncharacterized tRNA-dihydrouridine synthase-like
           protein C45G9.2-like [Glycine max]
          Length = 430

 Score =  337 bits (863), Expect = 5e-90
 Identities = 168/249 (67%), Positives = 190/249 (76%), Gaps = 10/249 (4%)
 Frame = +1

Query: 199 MIKSAVYPFLASLPPIY---------YCCSVKKHHRRSFNRFYCHSVECNSKHVKSAERR 351
           M+K A Y    S  PI          +   +   +R S+  F  H+ +           R
Sbjct: 1   MMKLAGYSLAVSFAPISSNVVKSNKRFTVGISHRNRCSYRLFSTHAQKHQLHEKPGVVAR 60

Query: 352 Y-LPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 528
           Y LPPWFSVAPMMDWTD+HYRTLARLISKHAWLYTEM+ AETIVHQ+ NLDRFL++ P+Q
Sbjct: 61  YHLPPWFSVAPMMDWTDHHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPDQ 120

Query: 529 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 708
           HPI+LQIGGSN+ENLAKA  LAN Y YD INLNCGCPS KVAGHGCFG  LMLNPKFVAE
Sbjct: 121 HPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAE 180

Query: 709 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 888
           AMSAIA + + PVSVKCRIGVD+HDSYNELCDFIY+V+S SPT+HFIIH+RKALLNGISP
Sbjct: 181 AMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISP 240

Query: 889 AANRKIPPL 915
           A NR IPPL
Sbjct: 241 AENRSIPPL 249


>ref|XP_007052508.1| FMN-linked oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao] gi|590724580|ref|XP_007052509.1| FMN-linked
           oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao] gi|508704769|gb|EOX96665.1| FMN-linked
           oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao] gi|508704770|gb|EOX96666.1| FMN-linked
           oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao]
          Length = 375

 Score =  335 bits (860), Expect = 1e-89
 Identities = 158/190 (83%), Positives = 173/190 (91%)
 Frame = +1

Query: 346 RRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPE 525
           RRYLPP FSVAPMM+WTDNHYRTLARLISKHAWLYTEM+ AETIV+Q+GNLDRFL++ PE
Sbjct: 4   RRYLPPLFSVAPMMEWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPE 63

Query: 526 QHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVA 705
           QHPI+LQIGG+NLENLAKA  LAN Y+YD IN NCGCPS KVAGHGCFG RLML+PKFV 
Sbjct: 64  QHPIVLQIGGNNLENLAKATELANAYHYDEINFNCGCPSPKVAGHGCFGVRLMLDPKFVG 123

Query: 706 EAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGIS 885
           EAMS IA N + PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGIS
Sbjct: 124 EAMSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIHSRKALLNGIS 183

Query: 886 PAANRKIPPL 915
           PA NR+IPPL
Sbjct: 184 PADNRRIPPL 193


>ref|XP_004306547.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 380

 Score =  335 bits (859), Expect = 1e-89
 Identities = 158/188 (84%), Positives = 170/188 (90%)
 Frame = +1

Query: 352 YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQH 531
           YLPP+FSVAPMM+WTD HYRT+ARLISKHAWLYTEM+ AETIV+Q+ NLDRFL FPPEQH
Sbjct: 12  YLPPYFSVAPMMEWTDVHYRTMARLISKHAWLYTEMLAAETIVYQKDNLDRFLYFPPEQH 71

Query: 532 PIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEA 711
           PI+LQIGGSNLENLAKA  LAN Y YD IN NCGCPS +VAGHGCFGARLML+PKFVAEA
Sbjct: 72  PIVLQIGGSNLENLAKATQLANIYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEA 131

Query: 712 MSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPA 891
           MS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISPA
Sbjct: 132 MSVIAANTDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPA 191

Query: 892 ANRKIPPL 915
            NR IPPL
Sbjct: 192 ENRSIPPL 199


>ref|XP_004975107.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           [Setaria italica]
          Length = 430

 Score =  334 bits (857), Expect = 3e-89
 Identities = 158/192 (82%), Positives = 173/192 (90%)
 Frame = +1

Query: 340 AERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFP 519
           A  ++LPP FSVAPMMDWTDNHYRTLARLIS+HAWLYTEMVVAETIVHQ+ NLDRFL+FP
Sbjct: 49  AAGKHLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFP 108

Query: 520 PEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKF 699
            EQHPI+LQIGGSNL+NLAKA  LAN Y+YD INLNCGCPSGKVAGHGCFGARLM +P+F
Sbjct: 109 EEQHPIVLQIGGSNLKNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEF 168

Query: 700 VAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNG 879
           V +AMSAIA NCD PVSVKCRIGVD+ DSY ELCDF+ KV S SPTRHFIIHARKALL+G
Sbjct: 169 VGDAMSAIAANCDVPVSVKCRIGVDDCDSYEELCDFVDKVVSNSPTRHFIIHARKALLSG 228

Query: 880 ISPAANRKIPPL 915
           ISPA NRK+PPL
Sbjct: 229 ISPAENRKVPPL 240


>ref|XP_002298425.2| hypothetical protein POPTR_0001s27210g [Populus trichocarpa]
           gi|550348297|gb|EEE83230.2| hypothetical protein
           POPTR_0001s27210g [Populus trichocarpa]
          Length = 493

 Score =  333 bits (854), Expect = 6e-89
 Identities = 155/204 (75%), Positives = 175/204 (85%)
 Frame = +1

Query: 304 HSVECNSKHVKSAERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVH 483
           H +     H +    +Y PP FSVAPMMDWTDNHYRT+AR+ISKHAWLYTEM+ AETIVH
Sbjct: 105 HQLRNIKTHTEMGVEQYRPPLFSVAPMMDWTDNHYRTVARIISKHAWLYTEMLAAETIVH 164

Query: 484 QEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHG 663
           Q+G+LDRFL+F PEQHPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHG
Sbjct: 165 QQGDLDRFLAFSPEQHPIVLQIGGNNLDNIAKATRLANSYGYDEINLNCGCPSPKVAGHG 224

Query: 664 CFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRH 843
           CFG RLML+PKFV EAMS IA N D PVSVKCRIG+D+HDSYNELCDFIYKV+S SPT+H
Sbjct: 225 CFGVRLMLDPKFVGEAMSVIAANTDVPVSVKCRIGLDDHDSYNELCDFIYKVSSLSPTKH 284

Query: 844 FIIHARKALLNGISPAANRKIPPL 915
           FIIH+RKALLNGISPA NR+IPPL
Sbjct: 285 FIIHSRKALLNGISPADNRRIPPL 308


>gb|ACN33393.1| unknown [Zea mays]
          Length = 296

 Score =  332 bits (851), Expect = 1e-88
 Identities = 157/192 (81%), Positives = 172/192 (89%)
 Frame = +1

Query: 340 AERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFP 519
           A  ++LPP FSVAPMMDWTDNHYRTLARLIS+HAWLYTEMVVAETIVHQ+ NLDRFL+FP
Sbjct: 49  AAGKHLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFP 108

Query: 520 PEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKF 699
            EQHPI+LQIGGSNLENLAKA  LAN Y+YD INLNCGCPSGKVAGHGCFGARLM +P+F
Sbjct: 109 EEQHPIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEF 168

Query: 700 VAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNG 879
           V +AMS IA NCD PVSVKCRIGVD+ DSY ELC+F+ KV S SPTRHFIIHARKALL+G
Sbjct: 169 VGDAMSTIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKVISKSPTRHFIIHARKALLSG 228

Query: 880 ISPAANRKIPPL 915
           +SPA NRKIPPL
Sbjct: 229 LSPAENRKIPPL 240


>ref|NP_001141027.1| uncharacterized protein LOC100273106 [Zea mays]
           gi|194702264|gb|ACF85216.1| unknown [Zea mays]
           gi|195645254|gb|ACG42095.1| tRNA-dihydrouridine synthase
           A [Zea mays] gi|414587841|tpg|DAA38412.1| TPA:
           tRNA-dihydrouridine synthase A [Zea mays]
          Length = 425

 Score =  332 bits (851), Expect = 1e-88
 Identities = 157/192 (81%), Positives = 172/192 (89%)
 Frame = +1

Query: 340 AERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFP 519
           A  ++LPP FSVAPMMDWTDNHYRTLARLIS+HAWLYTEMVVAETIVHQ+ NLDRFL+FP
Sbjct: 49  AAGKHLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFP 108

Query: 520 PEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKF 699
            EQHPI+LQIGGSNLENLAKA  LAN Y+YD INLNCGCPSGKVAGHGCFGARLM +P+F
Sbjct: 109 EEQHPIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEF 168

Query: 700 VAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNG 879
           V +AMS IA NCD PVSVKCRIGVD+ DSY ELC+F+ KV S SPTRHFIIHARKALL+G
Sbjct: 169 VGDAMSTIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKVISKSPTRHFIIHARKALLSG 228

Query: 880 ISPAANRKIPPL 915
           +SPA NRKIPPL
Sbjct: 229 LSPAENRKIPPL 240


>ref|XP_003599260.1| tRNA-dihydrouridine synthase A [Medicago truncatula]
           gi|355488308|gb|AES69511.1| tRNA-dihydrouridine synthase
           A [Medicago truncatula]
          Length = 294

 Score =  331 bits (848), Expect = 3e-88
 Identities = 155/191 (81%), Positives = 170/191 (89%)
 Frame = +1

Query: 343 ERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPP 522
           E  YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEM+ AETIV+Q+GNLDRFL++PP
Sbjct: 3   EDDYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYPP 62

Query: 523 EQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFV 702
           +QHPI+LQIGGSNLENLAKA  LA+ Y YD IN NCGCPS +VAG GCFGARLML PKFV
Sbjct: 63  DQHPIVLQIGGSNLENLAKATKLADAYGYDEINFNCGCPSPRVAGRGCFGARLMLEPKFV 122

Query: 703 AEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGI 882
           AEA+S IA N + PVSVKCRIGVD+HDSYNELCDFIYKV+S SP RHFIIH+RKALL G+
Sbjct: 123 AEAVSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGL 182

Query: 883 SPAANRKIPPL 915
           SPA NR IPPL
Sbjct: 183 SPAENRSIPPL 193