BLASTX nr result
ID: Cocculus23_contig00027007
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00027007
(311 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006843118.1| hypothetical protein AMTR_s00140p00093980 [A... 118 7e-25
ref|XP_006843120.1| hypothetical protein AMTR_s00140p00096690 [A... 107 2e-21
sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh... 105 8e-21
gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK254... 100 2e-19
gb|ABK21039.1| unknown [Picea sitchensis] gi|116786320|gb|ABK240... 100 4e-19
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi... 97 2e-18
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster] 96 4e-18
gb|AAL05052.1|AF410952_1 antimicrobial peptide 1 [Pinus sylvestris] 96 5e-18
ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Sela... 96 7e-18
ref|XP_002981961.1| hypothetical protein SELMODRAFT_115594 [Sela... 95 1e-17
ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Sela... 95 1e-17
sp|P83880.2|AMP1_PINMO RecName: Full=Antimicrobial peptide 1; Al... 93 4e-17
ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Sela... 92 6e-17
gb|AAL05054.1|AF410954_1 antimicrobial peptide 3 [Pinus sylvestris] 92 6e-17
gb|AAL05053.1|AF410953_1 antimicrobial peptide 2 [Pinus sylvestr... 91 1e-16
gb|AFK93075.1| anti-microbial protein [Pinus monticola] 91 2e-16
gb|AFK93081.1| anti-microbial protein [Pinus monticola] gi|38961... 90 4e-16
gb|ABR16715.1| unknown [Picea sitchensis] 90 4e-16
ref|XP_002981964.1| hypothetical protein SELMODRAFT_421330 [Sela... 89 5e-16
gb|AFK93073.1| anti-microbial protein [Pinus monticola] gi|38961... 89 6e-16
>ref|XP_006843118.1| hypothetical protein AMTR_s00140p00093980 [Amborella trichopoda]
gi|548845328|gb|ERN04793.1| hypothetical protein
AMTR_s00140p00093980 [Amborella trichopoda]
Length = 98
Score = 118 bits (296), Expect = 7e-25
Identities = 49/96 (51%), Positives = 67/96 (69%)
Frame = +3
Query: 24 MFATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEIRLHGGYNFVYNG 203
M +T+ + +L++ + + +ASSL VW GPGCN Y CGCS I L GGY FVYNG
Sbjct: 1 MVSTIALVAILAMALATSPVSASSLTVWAGPGCNNRAERYSKCGCSGIHLKGGYEFVYNG 60
Query: 204 QSASMFNQPGCRGIPHTRFNGNAGACSGFGWQSMFI 311
Q+A+++NQP C+G+ HTRF A +C+ FGW+SMFI
Sbjct: 61 QTAALYNQPDCKGVAHTRFGSGARSCNAFGWKSMFI 96
>ref|XP_006843120.1| hypothetical protein AMTR_s00140p00096690 [Amborella trichopoda]
gi|548845330|gb|ERN04795.1| hypothetical protein
AMTR_s00140p00096690 [Amborella trichopoda]
Length = 104
Score = 107 bits (267), Expect = 2e-21
Identities = 45/99 (45%), Positives = 63/99 (63%)
Frame = +3
Query: 15 KPSMFATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEIRLHGGYNFV 194
K SM +T+ + +L++ + + AS VW GPGCN CGCS I+ GGY FV
Sbjct: 4 KVSMVSTIALVAILAMALATSPVRASHFTVWAGPGCNNRAERVSKCGCSAIKQKGGYQFV 63
Query: 195 YNGQSASMFNQPGCRGIPHTRFNGNAGACSGFGWQSMFI 311
Y GQ+A+++NQ C+G+ HTRF A +CS FGW+S+FI
Sbjct: 64 YTGQTAALYNQGNCQGVAHTRFGSGASSCSAFGWRSIFI 102
>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
AMP1 [Macadamia integrifolia]
Length = 102
Score = 105 bits (261), Expect = 8e-21
Identities = 45/96 (46%), Positives = 64/96 (66%)
Frame = +3
Query: 24 MFATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEIRLHGGYNFVYNG 203
+F +V+ M+L + + S++ S+ VW GPGCN Y CGCS I GGY+F Y G
Sbjct: 6 LFFSVITVMML-IAMASEMVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTG 64
Query: 204 QSASMFNQPGCRGIPHTRFNGNAGACSGFGWQSMFI 311
Q+A+++NQ GC G+ HTRF +A AC+ FGW+S+FI
Sbjct: 65 QTAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFI 100
>gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK25496.1| unknown
[Picea sitchensis] gi|224285051|gb|ACN40253.1| unknown
[Picea sitchensis]
Length = 105
Score = 100 bits (249), Expect = 2e-19
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +3
Query: 27 FATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYN 200
FA ++ +V +L + + S W GPGCN Y CGCS I +HGGY FVY
Sbjct: 6 FACMMFLLVCLLLAFAQPSQGSYFTAWAGPGCNNHAARYSKCGCSNIGGNVHGGYEFVYQ 65
Query: 201 GQSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
GQ+AS +N C G+ HTRF+G+ ACSGFGW+S FI
Sbjct: 66 GQTASAYNTANCNGVAHTRFSGSVNQACSGFGWKSFFI 103
>gb|ABK21039.1| unknown [Picea sitchensis] gi|116786320|gb|ABK24065.1| unknown
[Picea sitchensis] gi|224284745|gb|ACN40103.1| unknown
[Picea sitchensis]
Length = 105
Score = 99.8 bits (247), Expect = 4e-19
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +3
Query: 27 FATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYN 200
FA ++ +V L + + S W GPGCN Y CGCS I +HGGY FVY
Sbjct: 6 FACMMFLLVCLFLAFAQPSQGSYFTAWAGPGCNNHAARYSKCGCSNIGGNVHGGYEFVYQ 65
Query: 201 GQSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
GQ+AS +N C G+ HTRF+G+ ACSGFGW+S FI
Sbjct: 66 GQTASAYNTANCNGVAHTRFSGSVNQACSGFGWKSFFI 103
>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
Protein
Length = 76
Score = 97.4 bits (241), Expect = 2e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = +3
Query: 90 SSLVVWKGPGCNFDLITYRNCGCSEIRLHGGYNFVYNGQSASMFNQPGCRGIPHTRFNGN 269
S+ VW GPGCN Y CGCS I GGY+F Y GQ+A+++NQ GC G+ HTRF +
Sbjct: 1 SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS 60
Query: 270 AGACSGFGWQSMFI 311
A AC+ FGW+S+FI
Sbjct: 61 ARACNPFGWKSIFI 74
>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
Length = 105
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEIR--LHGGYNFVYNG 203
A V+ +V L ++ + S W GPGCN Y CGCS I +HGGY FVY G
Sbjct: 7 AYVMFVLVCLFLALAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNDVHGGYEFVYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+AS +N C+G+ TRF+G+ ACSGFGW+S FI
Sbjct: 67 QTASAYNTANCKGVAQTRFSGSVNQACSGFGWKSFFI 103
>gb|AAL05052.1|AF410952_1 antimicrobial peptide 1 [Pinus sylvestris]
Length = 105
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + S W GPGCN Y CGCS I +H GY FVY G
Sbjct: 7 AYVMFVLVCLFLAMAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHAGYEFVYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+AS +N C+G+ TRF+G+ ACSGFGW+S FI
Sbjct: 67 QTASAYNTANCKGVAQTRFSGSVNQACSGFGWKSFFI 103
>ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Selaginella moellendorffii]
gi|300150408|gb|EFJ17059.1| hypothetical protein
SELMODRAFT_421332 [Selaginella moellendorffii]
Length = 101
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +3
Query: 24 MFATVVMAMVLSVLIMSDV-ATASSLVVWKGPGCNFDLITYRNCGCSEIRL--HGGYNFV 194
M +V+ +V+ V++ S + A AS W GPGCN L Y CGC+ + HGGY+F
Sbjct: 1 MAGKMVLVLVVLVVVGSMITANASYFDTWAGPGCNNRLERYSACGCTNVGASQHGGYSFG 60
Query: 195 YNGQSASMFNQPGCRGIPHTRFNGNAGACSGFGWQSMFI 311
Y GQ+A+ +N C+G+ HTRF+G+ CSGFGW S FI
Sbjct: 61 YQGQTAAAYNTANCQGVAHTRFSGSVQDCSGFGWNSFFI 99
>ref|XP_002981961.1| hypothetical protein SELMODRAFT_115594 [Selaginella moellendorffii]
gi|300150403|gb|EFJ17054.1| hypothetical protein
SELMODRAFT_115594 [Selaginella moellendorffii]
Length = 84
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +3
Query: 81 ATASSLVVWKGPGCNFDLITYRNCGCSEIRL--HGGYNFVYNGQSASMFNQPGCRGIPHT 254
A AS W GPGCN L Y CGC+ +R HGGY+FVY GQ+A+ +N CRG+ HT
Sbjct: 4 ANASFFDAWAGPGCNNVLERYSACGCTNVRASQHGGYSFVYQGQTAAAYNTANCRGVAHT 63
Query: 255 RFNGNAGACSGFGWQSMFI 311
RF+ + CSGFGW S FI
Sbjct: 64 RFSRSVQDCSGFGWNSFFI 82
>ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Selaginella moellendorffii]
gi|300150312|gb|EFJ16963.1| hypothetical protein
SELMODRAFT_115640 [Selaginella moellendorffii]
Length = 84
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +3
Query: 81 ATASSLVVWKGPGCNFDLITYRNCGCSEIRL--HGGYNFVYNGQSASMFNQPGCRGIPHT 254
A AS W GPGCN L YR CGC+ + HGGY+F Y GQ+A+ +N CRG+ HT
Sbjct: 4 ANASFFDAWAGPGCNNRLERYRACGCNNVGASQHGGYSFAYQGQTAAAYNTANCRGVAHT 63
Query: 255 RFNGNAGACSGFGWQSMFI 311
RF+ + CSGFGW+S+FI
Sbjct: 64 RFSSSVQDCSGFGWRSIFI 82
>sp|P83880.2|AMP1_PINMO RecName: Full=Antimicrobial peptide 1; AltName: Full=10.6 kDa
protein; AltName: Full=PMAP1; Flags: Precursor
gi|51317987|gb|AAU00106.1| anti-microbial protein
precursor [Pinus monticola]
Length = 105
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + AS W GPGCN Y CGCS I +HGGY FVY G
Sbjct: 7 AYVMFVLVCLFLAMAQPSQASYFSAWAGPGCNNHNARYSKCGCSNIGHNVHGGYEFVYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+A+ +N C+G+ TRF+ + ACS FGW+S+FI
Sbjct: 67 QTAAAYNTDNCKGVAQTRFSSSVNQACSNFGWKSVFI 103
>ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Selaginella moellendorffii]
gi|300150409|gb|EFJ17060.1| hypothetical protein
SELMODRAFT_115352 [Selaginella moellendorffii]
Length = 84
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +3
Query: 81 ATASSLVVWKGPGCNFDLITYRNCGCSEIRL--HGGYNFVYNGQSASMFNQPGCRGIPHT 254
A AS W GPGCN L Y CGC+ + HGGY+F Y GQ+A+ +N C+G+ HT
Sbjct: 4 ANASYFDAWAGPGCNNRLERYSACGCTNVGASQHGGYSFAYQGQTAAAYNTANCQGVAHT 63
Query: 255 RFNGNAGACSGFGWQSMFI 311
RF+G+ CSGFGW S FI
Sbjct: 64 RFSGSVQDCSGFGWNSFFI 82
>gb|AAL05054.1|AF410954_1 antimicrobial peptide 3 [Pinus sylvestris]
Length = 105
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + S W GPGCN Y CGCS I +HGGY F+Y G
Sbjct: 7 AYVMFVLVCLFLAMAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHGGYEFMYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+AS +N C+G+ TRF+ + ACS FGW+S FI
Sbjct: 67 QTASAYNTDNCKGVAQTRFSSSVNQACSSFGWKSFFI 103
>gb|AAL05053.1|AF410953_1 antimicrobial peptide 2 [Pinus sylvestris]
gi|15638613|gb|AAL05055.1|AF410955_1 antimicrobial
peptide 4 [Pinus sylvestris]
Length = 105
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + S W GPGCN Y CGCS I +HGGY F+Y G
Sbjct: 7 AYVMFVLVCLFLAMAQPSQGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHGGYEFMYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+A+ +N C+G+ TRF+ + ACS FGW+S FI
Sbjct: 67 QTAAAYNTDNCKGVAQTRFSSSVNQACSSFGWKSFFI 103
>gb|AFK93075.1| anti-microbial protein [Pinus monticola]
Length = 105
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + AS L W GPGCN Y CGCS I +HGGY FVY G
Sbjct: 7 AYVMFVLVSLFLAMAQPSQASYLSAWVGPGCNNHNARYNKCGCSNISHNVHGGYEFVYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+ +N C+G+ TRF+ N ACS F W+S+FI
Sbjct: 67 QAPMAYNTNNCKGVAQTRFSSNVNQACSNFAWKSVFI 103
>gb|AFK93081.1| anti-microbial protein [Pinus monticola]
gi|389619176|gb|AFK93082.1| anti-microbial protein
[Pinus monticola]
Length = 105
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + AS W GPGCN Y CGCS I +HGGY FVY G
Sbjct: 7 AYVMFVLVSLFLAMAQPSQASYFSAWVGPGCNNHNARYNKCGCSNISHNVHGGYEFVYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+ + +N C+G+ TRF+ N ACS F W+S+FI
Sbjct: 67 QAPTAYNTNNCKGVAQTRFSSNVNQACSNFAWKSVFI 103
>gb|ABR16715.1| unknown [Picea sitchensis]
Length = 105
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +3
Query: 27 FATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYN 200
F ++ V +L+ + + S W+ GCN + Y CGCS I + HGGY FV+
Sbjct: 6 FTYIMFLSVCLILVSARPSKGSYFTAWEAAGCNNQSVQYSKCGCSNIDDKFHGGYEFVFE 65
Query: 201 GQSASMFNQPGCRGIPHTRFNG-NAGACSGFGWQSMFI 311
GQSA+ +N C G PHTRF G CSGFGW+S FI
Sbjct: 66 GQSAAAYNTEICNGPPHTRFAGRGVQDCSGFGWKSFFI 103
>ref|XP_002981964.1| hypothetical protein SELMODRAFT_421330 [Selaginella moellendorffii]
gi|302800415|ref|XP_002981965.1| hypothetical protein
SELMODRAFT_421331 [Selaginella moellendorffii]
gi|300150406|gb|EFJ17057.1| hypothetical protein
SELMODRAFT_421330 [Selaginella moellendorffii]
gi|300150407|gb|EFJ17058.1| hypothetical protein
SELMODRAFT_421331 [Selaginella moellendorffii]
Length = 101
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Frame = +3
Query: 24 MFATVVMAMVLSVLIMSDV-ATASSLVVWKGPGCNFDLITYRNCGCSEIRL--HGGYNFV 194
M +V+ +V +++ S + A AS W GPGCN + Y CGC+ + HGGY+F
Sbjct: 1 MAGKMVLVLVAVIVLGSMITANASYFDTWAGPGCNNQRVRYSACGCTNVGASQHGGYSFG 60
Query: 195 YNGQSASMFNQPGCRGIPHTRFNGNAGACSGFGWQSMFI 311
Y GQ+A+ +N C+G+ TRF+ + CSGFGW S FI
Sbjct: 61 YQGQTAAAYNTANCQGVAQTRFSASVQDCSGFGWNSFFI 99
>gb|AFK93073.1| anti-microbial protein [Pinus monticola]
gi|389619160|gb|AFK93074.1| anti-microbial protein
[Pinus monticola] gi|389619164|gb|AFK93076.1|
anti-microbial protein [Pinus monticola]
gi|389619166|gb|AFK93077.1| anti-microbial protein
[Pinus monticola] gi|389619168|gb|AFK93078.1|
anti-microbial protein [Pinus monticola]
gi|389619172|gb|AFK93080.1| anti-microbial protein
[Pinus monticola]
Length = 105
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = +3
Query: 30 ATVVMAMVLSVLIMSDVATASSLVVWKGPGCNFDLITYRNCGCSEI--RLHGGYNFVYNG 203
A V+ +V L M+ + AS W GPGCN Y CGCS I +HGGY FVY G
Sbjct: 7 AYVMFVLVSLFLAMAQPSQASYFSAWVGPGCNNHNARYNKCGCSNISHNVHGGYEFVYQG 66
Query: 204 QSASMFNQPGCRGIPHTRFNGNAG-ACSGFGWQSMFI 311
Q+ +N C+G+ TRF+ N ACS F W+S+FI
Sbjct: 67 QAPMAYNTNNCKGVAQTRFSSNVNQACSNFAWKSVFI 103