BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00026425
         (386 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004288975.1| PREDICTED: RNA polymerase-associated protein...   179   4e-43
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   179   5e-43
emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]   179   5e-43
ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein...   178   6e-43
ref|XP_006396118.1| hypothetical protein EUTSA_v10002377mg [Eutr...   178   6e-43
ref|XP_006396117.1| hypothetical protein EUTSA_v10002377mg [Eutr...   178   6e-43
ref|XP_007012673.1| Binding isoform 4 [Theobroma cacao] gi|50878...   178   6e-43
ref|XP_007012670.1| Binding isoform 1 [Theobroma cacao] gi|50878...   178   6e-43
ref|XP_006296878.1| hypothetical protein CARUB_v10012866mg [Caps...   178   6e-43
ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein...   178   6e-43
ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arab...   178   6e-43
ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana...   178   6e-43
gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabi...   178   6e-43
gb|EXB38929.1| RNA polymerase-associated protein CTR9-like prote...   178   8e-43
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein...   178   8e-43
ref|XP_007138670.1| hypothetical protein PHAVU_009G228100g [Phas...   177   1e-42
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   177   1e-42
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...   177   1e-42
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...   177   1e-42
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein...   176   2e-42

>ref|XP_004288975.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Fragaria
           vesca subsp. vesca]
          Length = 899

 Score =  179 bits (454), Expect = 4e-43
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
           vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
           product [Vitis vinifera]
          Length = 1091

 Score =  179 bits (453), Expect = 5e-43
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKI+QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score =  179 bits (453), Expect = 5e-43
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKI+QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
           tuberosum]
          Length = 1095

 Score =  178 bits (452), Expect = 6e-43
 Identities = 87/93 (93%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK++QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_006396118.1| hypothetical protein EUTSA_v10002377mg [Eutrema salsugineum]
           gi|557096389|gb|ESQ36897.1| hypothetical protein
           EUTSA_v10002377mg [Eutrema salsugineum]
          Length = 1097

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 7   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 66

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSS +IDEYYADVKYERIAILNALGAYY
Sbjct: 67  QILEEGSSSDIDEYYADVKYERIAILNALGAYY 99


>ref|XP_006396117.1| hypothetical protein EUTSA_v10002377mg [Eutrema salsugineum]
           gi|557096388|gb|ESQ36896.1| hypothetical protein
           EUTSA_v10002377mg [Eutrema salsugineum]
          Length = 1091

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSS +IDEYYADVKYERIAILNALGAYY
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYY 93


>ref|XP_007012673.1| Binding isoform 4 [Theobroma cacao] gi|508783036|gb|EOY30292.1|
           Binding isoform 4 [Theobroma cacao]
          Length = 702

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 91/93 (97%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_007012670.1| Binding isoform 1 [Theobroma cacao] gi|508783033|gb|EOY30289.1|
           Binding isoform 1 [Theobroma cacao]
          Length = 1094

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 91/93 (97%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_006296878.1| hypothetical protein CARUB_v10012866mg [Capsella rubella]
           gi|482565587|gb|EOA29776.1| hypothetical protein
           CARUB_v10012866mg [Capsella rubella]
          Length = 1090

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSS +IDEYYADVKYERIAILNALGAYY
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYY 93


>ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
           lycopersicum]
          Length = 1095

 Score =  178 bits (452), Expect = 6e-43
 Identities = 87/93 (93%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK++QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
           lyrata] gi|297331658|gb|EFH62077.1| hypothetical protein
           ARALYDRAFT_480219 [Arabidopsis lyrata subsp. lyrata]
          Length = 1058

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSS +IDEYYADVKYERIAILNALGAYY
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYY 93


>ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
           gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION
           INDEPENDENCE 6 [Arabidopsis thaliana]
           gi|330250911|gb|AEC06005.1| protein early flowering 8
           [Arabidopsis thaliana]
          Length = 1091

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSS +IDEYYADVKYERIAILNALGAYY
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYY 93


>gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 740

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIEQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSS +IDEYYADVKYERIAILNALGAYY
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYY 93


>gb|EXB38929.1| RNA polymerase-associated protein CTR9-like protein [Morus
           notabilis]
          Length = 1107

 Score =  178 bits (451), Expect = 8e-43
 Identities = 87/93 (93%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLP+DASDILDILKAEQAPLDLWL+IAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPKDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1089

 Score =  178 bits (451), Expect = 8e-43
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKI+QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEID+YYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDDYYADVRYERIAILNALGAYY 93


>ref|XP_007138670.1| hypothetical protein PHAVU_009G228100g [Phaseolus vulgaris]
           gi|561011757|gb|ESW10664.1| hypothetical protein
           PHAVU_009G228100g [Phaseolus vulgaris]
          Length = 1082

 Score =  177 bits (450), Expect = 1e-42
 Identities = 87/93 (93%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKI+QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEID+YYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDDYYADVRYERIAILNALGAYY 93


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  177 bits (450), Expect = 1e-42
 Identities = 88/93 (94%), Positives = 91/93 (97%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK+EQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
           sativus]
          Length = 1074

 Score =  177 bits (450), Expect = 1e-42
 Identities = 88/93 (94%), Positives = 91/93 (97%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK+EQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1088

 Score =  177 bits (450), Expect = 1e-42
 Identities = 87/93 (93%), Positives = 92/93 (98%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA+VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKI+Q+R
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALGAYY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYY 93


>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
           sinensis]
          Length = 1088

 Score =  176 bits (447), Expect = 2e-42
 Identities = 87/93 (93%), Positives = 90/93 (96%)
 Frame = +1

Query: 106 MANVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIEQFR 285
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK+EQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 286 QILEEGSSPEIDEYYADVKYERIAILNALGAYY 384
           QILEEGSSPEIDEYYADV+YERIAILNALG YY
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYY 93