BLASTX nr result
ID: Cocculus23_contig00026416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026416
(774 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 273 4e-71
ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [T... 259 7e-67
ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [T... 259 7e-67
ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [T... 259 7e-67
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T... 259 7e-67
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T... 259 7e-67
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T... 259 7e-67
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T... 259 7e-67
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 257 3e-66
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun... 236 5e-60
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A... 234 3e-59
ref|XP_002320019.2| FF domain-containing family protein [Populus... 193 5e-47
ref|XP_002300284.2| hypothetical protein POPTR_0001s29710g [Popu... 182 2e-43
ref|XP_006486884.1| PREDICTED: pre-mRNA-processing protein 40A-l... 179 1e-42
ref|XP_006422757.1| hypothetical protein CICLE_v10027732mg [Citr... 178 2e-42
ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [T... 177 3e-42
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor... 171 4e-40
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l... 169 8e-40
ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-l... 169 1e-39
ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phas... 169 1e-39
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 273 bits (699), Expect = 4e-71
Identities = 149/261 (57%), Positives = 168/261 (64%), Gaps = 6/261 (2%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQG 189
MA+NPQSSGAQ RPP VGS GPQ+F PP+SMQFRP P QQ FIP +S QFRP+GQ
Sbjct: 1 MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQN 60
Query: 190 VS--NMGVPSTXXXXXXXXXXXXXLPPR---XXXXXXXXXXXXXXYGQPNRPITSGSSQM 354
+S N+G PS LPPR Y Q NRP+TS S Q
Sbjct: 61 ISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQP 120
Query: 355 PQNAQPLNNMPGAVGGLGMPLSSSYTFAP-SYGQPQTNMNISSQYQPVSQMHATVIPPAG 531
Q A PLN+ + G GMP SSSYTFAP S+GQPQ+ +N S+Q+QP+SQMHA P G
Sbjct: 121 NQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHA---PVGG 177
Query: 532 QPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYY 711
QPWLS+G+QS LVTP H GQQ +PN T QSSSDWQEHTS DGRRYY
Sbjct: 178 QPWLSSGSQSGALVTPVHQAGQQ--PSVTADIPAGNVPNPTHQSSSDWQEHTSADGRRYY 235
Query: 712 YNKKTRQSSWEKPLELMTPIE 774
YNKKTR SSWEKPLELMTPIE
Sbjct: 236 YNKKTRLSSWEKPLELMTPIE 256
>ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
gi|508723771|gb|EOY15668.1| Pre-mRNA-processing protein
40A isoform 8 [Theobroma cacao]
Length = 789
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
gi|508723770|gb|EOY15667.1| Pre-mRNA-processing protein
40A isoform 7 [Theobroma cacao]
Length = 787
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
gi|508723769|gb|EOY15666.1| Pre-mRNA-processing protein
40A isoform 6 [Theobroma cacao]
Length = 774
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
40A isoform 5 [Theobroma cacao]
Length = 904
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
40A isoform 4 [Theobroma cacao]
Length = 844
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
40A isoform 3 [Theobroma cacao]
Length = 1041
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
protein 40A isoform 1 [Theobroma cacao]
gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
Length = 1032
Score = 259 bits (662), Expect = 7e-67
Identities = 141/260 (54%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ- 186
MA+N Q S AQ PP VGS GPQS+ P+S QFRPV P QQ Q F+P +S QFRPVGQ
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV 60
Query: 187 GVSNMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMP 357
SN+G+P+ PPR +GQ NRP+TSGS Q
Sbjct: 61 PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH 120
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
Q A PLN+ +G GMP SSSY++ PS +GQPQ N++ SSQ+QP SQ+HA+V P AGQ
Sbjct: 121 QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQ 180
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
PWLS+GNQS L P TGQQ N P T S+SDWQEHTS DGRRYYY
Sbjct: 181 PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYYY 239
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NKKTRQSSWEKPLELMTPIE
Sbjct: 240 NKKTRQSSWEKPLELMTPIE 259
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 257 bits (657), Expect = 3e-66
Identities = 144/263 (54%), Positives = 162/263 (61%), Gaps = 7/263 (2%)
Frame = +1
Query: 7 GMASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ 186
GMA+NPQSSGAQ RPP VGS GPQ+F PP+SMQFRP P QQ FIP +S QFRP+GQ
Sbjct: 14 GMANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQ 73
Query: 187 GVS--NMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQ 351
+S N+G PS LPPR Y Q NRP+TS S Q
Sbjct: 74 NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 133
Query: 352 MPQNAQPLNN-MPGAVGGLGMPLSSSYTFAP-SYGQPQTNMNISSQYQPVSQMHATVIPP 525
Q A PLN+ MPG FAP S+GQPQ+ +N S+Q+QP+SQMHA P
Sbjct: 134 PNQTAPPLNSHMPGL-------------FAPASFGQPQSTINASAQFQPISQMHA---PV 177
Query: 526 AGQPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRR 705
GQPWLS+G+QS LVTP H GQQ +PN T QSSSDWQEHTS DGRR
Sbjct: 178 GGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNVPNPTHQSSSDWQEHTSADGRR 237
Query: 706 YYYNKKTRQSSWEKPLELMTPIE 774
YYYNKKTR SSWEKPLELMTPIE
Sbjct: 238 YYYNKKTRLSSWEKPLELMTPIE 260
>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
gi|462423966|gb|EMJ28229.1| hypothetical protein
PRUPE_ppa000697mg [Prunus persica]
Length = 1031
Score = 236 bits (603), Expect = 5e-60
Identities = 136/261 (52%), Positives = 163/261 (62%), Gaps = 6/261 (2%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQG 189
MA+NPQSS AQ RPP V S GPQSF S+Q+RPV P QQ Q FI ++S QF+PVGQG
Sbjct: 1 MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQG 60
Query: 190 V--SNMGVPSTXXXXXXXXXXXXXLP--PRXXXXXXXXXXXXXXYGQPNRPITSGSSQMP 357
+ SN+G+P++ P P RPITS SQ
Sbjct: 61 IPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTRPITSAPSQSQ 120
Query: 358 QNAQPLNN-MPGAVGGLGMPLSSSYTFAP-SYGQPQTNMNISSQYQPVSQMHATVIPPAG 531
Q A P NN MPG GG GMP SSSY FAP SY QPQ N++ SSQ+QP+SQ+ A V G
Sbjct: 121 QPALPFNNQMPGLAGG-GMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHV-SVTG 178
Query: 532 QPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYY 711
QPW+S+GNQ A + TP +GQQ N +P+ T QSSSDWQEHTS DGRRYY
Sbjct: 179 QPWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVN-VPSQTQQSSSDWQEHTSGDGRRYY 237
Query: 712 YNKKTRQSSWEKPLELMTPIE 774
+N++T+QSSWEKPLELMTP+E
Sbjct: 238 FNRRTKQSSWEKPLELMTPME 258
>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
gi|548831471|gb|ERM94279.1| hypothetical protein
AMTR_s00010p00227470 [Amborella trichopoda]
Length = 985
Score = 234 bits (596), Expect = 3e-59
Identities = 134/248 (54%), Positives = 150/248 (60%), Gaps = 10/248 (4%)
Frame = +1
Query: 61 VGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQGV--SNMGVPS-TXXXXX 231
+G GPQ++ PMSMQFRP+ P QQ Q FI S QFRPVGQG+ SN+G PS
Sbjct: 1 MGPGGPQNYGTPMSMQFRPMVPTQQSQPFISAPSQQFRPVGQGIPASNIGSPSPVQAQQA 60
Query: 232 XXXXXXXXLPPRXXXXXXXXXXXXXX---YGQPNRPITSGSSQMPQNAQPLNNMPGAVGG 402
LPPR Y QPNRP+TSG Q+PQN Q +N P +GG
Sbjct: 61 QYALGMQQLPPRPAQTAQVAPSPQTVPLSYIQPNRPMTSGPLQIPQNPQHVNIHPPGLGG 120
Query: 403 LGMPLSSSYTF-APS-YGQPQTNMNISSQYQPVSQMHATVIPPA--GQPWLSAGNQSAPL 570
G LSSSYTF APS Y PQ N+NISSQYQP SQM +P GQPWLS+G+QS +
Sbjct: 121 PGTVLSSSYTFTAPSSYVHPQNNINISSQYQPSSQMQVPGVPSGSGGQPWLSSGSQSTTV 180
Query: 571 VTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYYNKKTRQSSWEKP 750
+ P QQ PN T QSSSDWQEHTS DGRRYYYNKKTRQSSWEKP
Sbjct: 181 IPPVVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRYYYNKKTRQSSWEKP 240
Query: 751 LELMTPIE 774
LELMTPIE
Sbjct: 241 LELMTPIE 248
>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
gi|550323102|gb|EEE98334.2| FF domain-containing family
protein [Populus trichocarpa]
Length = 1019
Score = 193 bits (491), Expect = 5e-47
Identities = 117/259 (45%), Positives = 142/259 (54%), Gaps = 4/259 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQG 189
MASNPQSSG Q FRP+ P QQ Q FI +S QFRPVGQG
Sbjct: 1 MASNPQSSGGQ----------------------FRPMVPTQQGQPFIQVASQQFRPVGQG 38
Query: 190 V--SNMGVPSTXXXXXXXXXXXXXLPP-RXXXXXXXXXXXXXXYGQPNRPITSGSSQMPQ 360
+ S++G+P+ LPP YGQ NRP+TS SQ Q
Sbjct: 39 MPSSHVGMPAAQSQHLQFSQPIQQLPPWPNQPGAPSAQALSMPYGQLNRPLTS--SQPQQ 96
Query: 361 NAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQP 537
NA PL+N VG G+P SS Y FAPS +G Q + + Q+ P+SQMHA V+P GQP
Sbjct: 97 NAPPLSNHMHVVGTSGVPNSSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQP 156
Query: 538 WLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYYN 717
WLS+G+ A LV P P Q N+ QS SDWQEHT++DGRRYYYN
Sbjct: 157 WLSSGSHGASLVPPVQPAVVQPSISSSSDSTVAVSSNSQ-QSLSDWQEHTASDGRRYYYN 215
Query: 718 KKTRQSSWEKPLELMTPIE 774
++T+QSSW+KP ELMTPIE
Sbjct: 216 RRTKQSSWDKPFELMTPIE 234
>ref|XP_002300284.2| hypothetical protein POPTR_0001s29710g [Populus trichocarpa]
gi|550348497|gb|EEE85089.2| hypothetical protein
POPTR_0001s29710g [Populus trichocarpa]
Length = 972
Score = 182 bits (461), Expect = 2e-43
Identities = 109/260 (41%), Positives = 136/260 (52%), Gaps = 5/260 (1%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGPQSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQG 189
MA+NPQ SG MQFRPV P Q Q FIP SSP F+PVG+G
Sbjct: 1 MANNPQFSG----------------------MQFRPVGPVQPSQQFIPVSSPHFQPVGRG 38
Query: 190 VS--NMGVPSTXXXXXXXXXXXXX--LPPRXXXXXXXXXXXXXXYGQPNRPITSGSSQMP 357
V+ N G+P P + QPNR + SGS P
Sbjct: 39 VTVMNPGLPPQPPQPQFPHPMQQLPARPNQPSLGPPPPQAIPLPNAQPNRHVMSGSPLPP 98
Query: 358 QNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAGQ 534
+ Q N+ +GG G+PLSSSYTFAPS YGQP N +Q+QP+ QMH IP G
Sbjct: 99 PSVQTPNSYMPGLGGPGVPLSSSYTFAPSSYGQPPVTFNAVTQFQPMPQMHVQPIPTGGH 158
Query: 535 PWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYY 714
P S + +AP VTP G+Q T+ P T ++ ++W+EHTS +GRR+YY
Sbjct: 159 PASSMNHNTAP-VTPIQRNGEQSSVTTTNVRATSIQPKPTEEALTEWKEHTSANGRRFYY 217
Query: 715 NKKTRQSSWEKPLELMTPIE 774
NK+TRQSSWEKP EL+TPIE
Sbjct: 218 NKRTRQSSWEKPYELLTPIE 237
>ref|XP_006486884.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Citrus
sinensis] gi|568867105|ref|XP_006486885.1| PREDICTED:
pre-mRNA-processing protein 40A-like isoform X2 [Citrus
sinensis] gi|568867107|ref|XP_006486886.1| PREDICTED:
pre-mRNA-processing protein 40A-like isoform X3 [Citrus
sinensis] gi|568867109|ref|XP_006486887.1| PREDICTED:
pre-mRNA-processing protein 40A-like isoform X4 [Citrus
sinensis]
Length = 1029
Score = 179 bits (453), Expect = 1e-42
Identities = 112/266 (42%), Positives = 143/266 (53%), Gaps = 11/266 (4%)
Frame = +1
Query: 10 MASNPQSSGAQAP-RPPIVGSAGP-QSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVG 183
MA+N SGAQ P +PP+VGS P + F PP+ Q+RP+ P QPQ ++P +S F+P G
Sbjct: 4 MANNAPYSGAQVPHQPPMVGSMDPPRGFGPPIPSQYRPLVPAPQPQHYVPMASQHFQPGG 63
Query: 184 QG--VSNMGVPSTXXXXXXXXXXXXXL----PPRXXXXXXXXXXXXXXYGQPNRPITSGS 345
QG + N G PS PP QP+ I S
Sbjct: 64 QGGLIMNAGFPSQPLQPPFRPLMHPLPARPGPPAPSHVPPPPQVMSLPNAQPSNHIPPSS 123
Query: 346 SQMPQNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQT--NMNISSQYQPVSQMHATV 516
P N Q L++ P +GGLG P+++SYTFAPS YGQPQ N+NI SQ QP+SQMH
Sbjct: 124 LPRP-NVQALSSYPPGLGGLGRPVAASYTFAPSSYGQPQLIGNVNIGSQ-QPMSQMHVPS 181
Query: 517 IPPAGQPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTD 696
I GQ +S +QS TP PT +Q P + +DW+EHTS D
Sbjct: 182 ISAGGQLGVSV-SQSTVSSTPVQPTDEQMAATTASAPLPTLQPKSAEGVQTDWKEHTSAD 240
Query: 697 GRRYYYNKKTRQSSWEKPLELMTPIE 774
GRRYY+NK+TR S+W+KP ELMT IE
Sbjct: 241 GRRYYFNKRTRVSTWDKPFELMTTIE 266
>ref|XP_006422757.1| hypothetical protein CICLE_v10027732mg [Citrus clementina]
gi|557524691|gb|ESR35997.1| hypothetical protein
CICLE_v10027732mg [Citrus clementina]
Length = 1029
Score = 178 bits (452), Expect = 2e-42
Identities = 111/266 (41%), Positives = 142/266 (53%), Gaps = 11/266 (4%)
Frame = +1
Query: 10 MASNPQSSGAQAP-RPPIVGSAGP-QSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVG 183
MA+N SGAQ P +PP+VGS P + F PP+ Q+RP+ P QPQ ++P +S F+P G
Sbjct: 4 MANNAPYSGAQVPHQPPMVGSMDPPRGFGPPIPSQYRPLVPAPQPQQYVPMASQHFQPAG 63
Query: 184 QG--VSNMGVPSTXXXXXXXXXXXXXL----PPRXXXXXXXXXXXXXXYGQPNRPITSGS 345
QG + N G PS PP QP+ I S
Sbjct: 64 QGGLIMNAGFPSQPLQPPFRPLMHPLPARPGPPAPSHVPPPPQVMSLPNAQPSNHIPPSS 123
Query: 346 SQMPQNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQT--NMNISSQYQPVSQMHATV 516
P N Q L++ P +GGLG P+++SYTFAPS YGQPQ N+N SQ QP+SQMH
Sbjct: 124 LPRP-NVQALSSYPPGLGGLGRPVAASYTFAPSSYGQPQLIGNVNTGSQ-QPMSQMHVPS 181
Query: 517 IPPAGQPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTD 696
I GQ +S +QS TP PT +Q P + +DW+EHTS D
Sbjct: 182 ISAGGQLGVSV-SQSTVSSTPVQPTDEQMAATTASAPLPTLQPKSAEGVQTDWKEHTSAD 240
Query: 697 GRRYYYNKKTRQSSWEKPLELMTPIE 774
GRRYY+NK+TR S+W+KP ELMT IE
Sbjct: 241 GRRYYFNKRTRVSTWDKPFELMTTIE 266
>ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [Theobroma cacao]
gi|508706620|gb|EOX98516.1| Pre-mRNA-processing protein
40B, putative [Theobroma cacao]
Length = 1025
Score = 177 bits (450), Expect = 3e-42
Identities = 110/261 (42%), Positives = 138/261 (52%), Gaps = 6/261 (2%)
Frame = +1
Query: 10 MASNPQSSGAQAPRPPIVGSAGP-QSFVPPMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQ 186
MA+NPQ SG Q PP+VGS P ++F PPMS QFRPV P QQPQ F+P + F+PV +
Sbjct: 1 MANNPQFSGVQPHPPPLVGSMDPPRNFPPPMSAQFRPVVPSQQPQQFVPVAPQLFQPVAR 60
Query: 187 GVSNMGV---PSTXXXXXXXXXXXXXLPP-RXXXXXXXXXXXXXXYGQPNRPITSGSSQM 354
GV+ M P T P + QP+ ++ G+S
Sbjct: 61 GVTVMNSGFSPQTQQPQFPQVMQQLPARPVQPGHIPPAALGISLPTAQPHCHVSPGASLP 120
Query: 355 PQNAQPLNNMPGAVGGLGMPLSSSYTFAPS-YGQPQTNMNISSQYQPVSQMHATVIPPAG 531
N Q NN GG LSSSY FA S YGQ + N +QYQP+ Q+ A + G
Sbjct: 121 QPNIQTPNNYVS--GGPASHLSSSYPFASSSYGQASVSQNAMAQYQPMPQLQAPSVSVGG 178
Query: 532 QPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYY 711
+ +QS+ V P H +Q + P T ++S+DW EHTS +GRRYY
Sbjct: 179 HVGIHV-SQSSSSVIPVHQIVEQPSVSTATVPAPSIQPKPTEEASTDWIEHTSANGRRYY 237
Query: 712 YNKKTRQSSWEKPLELMTPIE 774
YNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YNKKTRQSSWEKPLELMTPIE 258
>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
Length = 994
Score = 171 bits (432), Expect = 4e-40
Identities = 106/228 (46%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Frame = +1
Query: 118 VAPQQQPQSFIPTSSPQFRPVGQGVS--NMGVPSTXXXXXXXXXXXXXLPPRXXXXXXXX 291
+ P Q Q FIP SS QF+PVGQG+ N+G+ PPR
Sbjct: 1 MVPNQHGQPFIP-SSQQFQPVGQGIPPPNLGMHPAHSQPVQFSQQMQQYPPRPSQPGHPM 59
Query: 292 XXXXXXYGQP-----NRPITSGSSQMPQNAQPLNN-MPGAVGGLGMPLSSSYTFAPS-YG 450
G P RPI G Q Q+A P N MP G MP SSSY++APS +
Sbjct: 60 PSSQ---GLPMSYIQTRPIAPGPPQSQQHAAPFTNQMPP---GGAMPFSSSYSYAPSSFV 113
Query: 451 QPQTNMNISSQYQPVSQMHATVIPPAGQPWLSAGNQSAPLVTPAHPTGQQXXXXXXXXXX 630
QPQ N + SQ+Q +SQM A P GQPWLS+G SAP V P GQ
Sbjct: 114 QPQNNASSVSQFQQMSQMQAPTAPGPGQPWLSSGIHSAPPVAPGQQVGQPPSAASSADAA 173
Query: 631 TNQLPNATIQSSSDWQEHTSTDGRRYYYNKKTRQSSWEKPLELMTPIE 774
TN +P+ T QSSSDWQEHTS+DGRRYYYNK+T+QS W+KP+ELMTPIE
Sbjct: 174 TN-VPSTTQQSSSDWQEHTSSDGRRYYYNKRTKQSVWDKPVELMTPIE 220
>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
Length = 997
Score = 169 bits (429), Expect = 8e-40
Identities = 107/231 (46%), Positives = 125/231 (54%), Gaps = 7/231 (3%)
Frame = +1
Query: 103 MQFRPVAPQQQPQSFIPTSSPQFRPVGQGV--SNMGVPSTXXXXXXXXXXXXXL---PPR 267
+QFRPV QQ Q F+P +S QF P G + SN G+P L P +
Sbjct: 5 LQFRPVTQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQLTQRPMQ 64
Query: 268 XXXXXXXXXXXXXXYGQPNRPITSGSSQMPQNAQPLNN-MPGAVGGLGMPLSSSYTFAPS 444
Y Q NRP+TS QN PL+N MPG + P SS +T S
Sbjct: 65 PGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVAAPHSSYFTL--S 122
Query: 445 YGQPQTNMNISSQYQPVSQMHATVIPPAGQPWLSAGNQSAPLVTPAHPTGQQXXXXXXXX 624
YGQ Q N N +QYQ QM A PP+GQPW S+ +QSA VT P G Q
Sbjct: 123 YGQQQDNANALAQYQHPPQMFA---PPSGQPWPSSASQSAVAVTSVQPAGVQSSGATS-- 177
Query: 625 XXTNQLPNATIQSS-SDWQEHTSTDGRRYYYNKKTRQSSWEKPLELMTPIE 774
T+ + NAT Q S SDWQEHTS DGRRYYYNK+TRQSSWEKPLELM+PIE
Sbjct: 178 --TDAVINATNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIE 226
>ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cicer arietinum]
Length = 1000
Score = 169 bits (428), Expect = 1e-39
Identities = 106/234 (45%), Positives = 124/234 (52%), Gaps = 7/234 (2%)
Frame = +1
Query: 94 PMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQGV--SNMGVPSTXXXXXXXXXXXXXLPPR 267
P +QFRPV QQ Q F+P +S QF G V SN+G+P +
Sbjct: 8 PSGIQFRPVIHAQQGQPFVPMTSQQFGHAGHAVPSSNVGMPGQQLQYSQSMQQMAPRQIQ 67
Query: 268 XXXXXXXXXXXXXXYGQPNRPITSGSSQMPQNAQPL-----NNMPGAVGGLGMPLSSSYT 432
Y Q NRP+TS +PQ+AQ N+MPG G P SSYT
Sbjct: 68 PGHPGSSSQGIPMPYIQTNRPLTS----VPQHAQQAVPHVSNHMPGLAVS-GAPPQSSYT 122
Query: 433 FAPSYGQPQTNMNISSQYQPVSQMHATVIPPAGQPWLSAGNQSAPLVTPAHPTGQQXXXX 612
F PSYGQ Q N N QYQ QM A PPAGQPW S+ +QSA VT P G Q
Sbjct: 123 FTPSYGQQQDNANALPQYQHQPQMLA---PPAGQPWPSSVSQSAAAVTSVPPAGVQSSGT 179
Query: 613 XXXXXXTNQLPNATIQSSSDWQEHTSTDGRRYYYNKKTRQSSWEKPLELMTPIE 774
TN + S+SDWQEH+S DGRRYYYNK+TRQSSWEKPLELM+P+E
Sbjct: 180 ASTDAATNTTNH---NSASDWQEHSSADGRRYYYNKRTRQSSWEKPLELMSPLE 230
>ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
gi|561034404|gb|ESW32934.1| hypothetical protein
PHAVU_001G029800g [Phaseolus vulgaris]
Length = 1000
Score = 169 bits (427), Expect = 1e-39
Identities = 110/234 (47%), Positives = 125/234 (53%), Gaps = 7/234 (2%)
Frame = +1
Query: 94 PMSMQFRPVAPQQQPQSFIPTSSPQFRPVGQGV--SNMGVPSTXXXXXXXXXXXXXLPPR 267
P SMQFRPV QQ Q F+P +S QF P G + SN G+P L PR
Sbjct: 7 PSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQLTPR 66
Query: 268 XXXXXXXXXXXXXX---YGQPNRPITSGSSQMPQNAQPLNN-MPGAVGGLGMPLSSSYTF 435
Y Q NRP++S Q+ PL+N MPG P SSYTF
Sbjct: 67 PMQPGHLAPSSQPIPMPYIQTNRPMSSIPPHS-QSVPPLSNHMPGLPVSGAAP-HSSYTF 124
Query: 436 APSYGQPQTNMNISSQYQPVSQMHATVIPPAGQPWLSAGNQSAPLVTPAHPTGQQXXXXX 615
PSYGQ N N +QYQ QM A PP GQPWLS+ +QS T P G Q
Sbjct: 125 TPSYGQQHDNANALAQYQHPPQMLA---PPGGQPWLSSASQSVAPSTSVQPAGLQSSGAT 181
Query: 616 XXXXXTNQLPNATIQSS-SDWQEHTSTDGRRYYYNKKTRQSSWEKPLELMTPIE 774
T+ + NAT Q S SDWQEHTS DGRRYYYNK+TRQSSWEKPLELM+PIE
Sbjct: 182 L----TDAVTNATNQHSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIE 231