BLASTX nr result
ID: Cocculus23_contig00026295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026295
(1446 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP76351.1| small subunit ribosomal protein, partial (mitocho... 103 2e-19
gb|AAP76350.1| small subunit ribosomal protein [Cissampelos pare... 101 9e-19
gb|AAP76348.1| small subunit ribosomal protein [Bocconia frutesc... 100 1e-18
ref|YP_007905718.1| ribosomal protein S11 (mitochondrion) [Lirio... 99 6e-18
gb|AAP76362.1| small subunit ribosomal protein [Trochodendron ar... 99 6e-18
gb|AAP76345.1| small subunit ribosomal protein [Akebia quinata] 97 2e-17
gb|AAP76360.1| small subunit ribosomal protein [Grevillea robusta] 96 3e-17
gb|AAP76349.1| small subunit ribosomal protein [Sanguinaria cana... 96 5e-17
gb|AAP76359.1| small subunit ribosomal protein [Nelumbo nucifera] 94 2e-16
gb|AAP76361.1| small subunit ribosomal protein [Platanus occiden... 94 2e-16
gb|AAP76356.1| small subunit ribosomal protein [Liriodendron tul... 85 9e-14
gb|AAP76358.1| small subunit ribosomal protein [Betula nigra] 85 9e-14
gb|AAP76346.1| small subunit ribosomal protein [Stylophorum diph... 83 3e-13
gb|AAP76364.1| small subunit ribosomal protein [Polyalthia suber... 82 5e-13
gb|AAP76355.1| small subunit ribosomal protein [Annona cherimola] 82 5e-13
gb|AAP76344.1| small subunit ribosomal protein [Berberis thunber... 82 6e-13
gb|AAP76347.1| small subunit ribosomal protein [Eschscholzia cal... 82 6e-13
ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup5... 81 1e-12
emb|CBI27624.3| unnamed protein product [Vitis vinifera] 81 1e-12
gb|AAP76341.1| small subunit ribosomal protein [Weigela hortensis] 81 1e-12
>gb|AAP76351.1| small subunit ribosomal protein, partial (mitochondrion) [Cocculus
carolinus]
Length = 148
Score = 103 bits (256), Expect = 2e-19
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQVFAGRSFKSMNFVQ+I EEDEQLERKNKDFVHLPP+HNNTFVTVT+
Sbjct: 8 AERVEQQVFAGRSFKSMNFVQSISEEDEQLERKNKDFVHLPPIHNNTFVTVTD 60
>gb|AAP76350.1| small subunit ribosomal protein [Cissampelos pareira]
Length = 148
Score = 101 bits (251), Expect = 9e-19
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQVFAGRSFKSMNFVQ+I E DEQLERKNKDFVHLPP+HNNTFVTVT+
Sbjct: 8 AERVEQQVFAGRSFKSMNFVQSISENDEQLERKNKDFVHLPPIHNNTFVTVTD 60
>gb|AAP76348.1| small subunit ribosomal protein [Bocconia frutescens]
gi|32348780|gb|AAP76363.1| small subunit ribosomal
protein [Tetracentron sinense]
Length = 148
Score = 100 bits (250), Expect = 1e-18
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+I EEDEQLERKNKDFVHLPP+HNNTFVTVT+
Sbjct: 8 AERVEQQVIAGRSFKSMNFVQSISEEDEQLERKNKDFVHLPPIHNNTFVTVTD 60
>ref|YP_007905718.1| ribosomal protein S11 (mitochondrion) [Liriodendron tulipifera]
gi|480541922|gb|AGJ90415.1| ribosomal protein S11
(mitochondrion) [Liriodendron tulipifera]
Length = 172
Score = 98.6 bits (244), Expect = 6e-18
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+I EEDEQLERKNKDFVHLPP+H NTFVTVT+
Sbjct: 9 AERVEQQVIAGRSFKSMNFVQSISEEDEQLERKNKDFVHLPPIHKNTFVTVTD 61
>gb|AAP76362.1| small subunit ribosomal protein [Trochodendron aralioides]
Length = 148
Score = 98.6 bits (244), Expect = 6e-18
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+I EEDEQLERKN DFVHLPP+HNNTFVTVT+
Sbjct: 8 AERVEQQVIAGRSFKSMNFVQSISEEDEQLERKNTDFVHLPPIHNNTFVTVTD 60
>gb|AAP76345.1| small subunit ribosomal protein [Akebia quinata]
Length = 148
Score = 97.1 bits (240), Expect = 2e-17
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER EQQV AGRSFKSMNFVQ+I EEDEQLERK KDFVHLPP+HNNTFVTVT+
Sbjct: 8 AERYEQQVIAGRSFKSMNFVQSISEEDEQLERKKKDFVHLPPIHNNTFVTVTD 60
>gb|AAP76360.1| small subunit ribosomal protein [Grevillea robusta]
Length = 148
Score = 96.3 bits (238), Expect = 3e-17
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+I EEDEQLERKNKDFVHLPP +NNTFVTVT+
Sbjct: 8 AERVEQQVIAGRSFKSMNFVQSISEEDEQLERKNKDFVHLPPKNNNTFVTVTD 60
>gb|AAP76349.1| small subunit ribosomal protein [Sanguinaria canadensis]
Length = 142
Score = 95.5 bits (236), Expect = 5e-17
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+ILEEDEQLERKNKDFVHL +HNNTFVTVT+
Sbjct: 8 AERVEQQVIAGRSFKSMNFVQSILEEDEQLERKNKDFVHLLLIHNNTFVTVTD 60
>gb|AAP76359.1| small subunit ribosomal protein [Nelumbo nucifera]
Length = 148
Score = 94.0 bits (232), Expect = 2e-16
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+I EEDEQ RK KDFVHLPP+HNNTFVTVT+
Sbjct: 8 AERVEQQVIAGRSFKSMNFVQSISEEDEQFFRKKKDFVHLPPIHNNTFVTVTD 60
>gb|AAP76361.1| small subunit ribosomal protein [Platanus occidentalis]
Length = 148
Score = 93.6 bits (231), Expect = 2e-16
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AER+EQQV AGRSFKSMNFVQ+I EEDEQLERKNK FVHLPP +NNTFVTVT+
Sbjct: 8 AERVEQQVIAGRSFKSMNFVQSISEEDEQLERKNKXFVHLPPKNNNTFVTVTD 60
>gb|AAP76356.1| small subunit ribosomal protein [Liriodendron tulipifera]
Length = 132
Score = 84.7 bits (208), Expect = 9e-14
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -2
Query: 1418 AGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AGRSFKSMNFVQ+I EEDEQLERKNKDFVHLPP+H NTFVTVT+
Sbjct: 1 AGRSFKSMNFVQSISEEDEQLERKNKDFVHLPPIHKNTFVTVTD 44
>gb|AAP76358.1| small subunit ribosomal protein [Betula nigra]
Length = 128
Score = 84.7 bits (208), Expect = 9e-14
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -2
Query: 1418 AGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AGRS KSMNFVQ+I EEDEQLERKNKDFVHLPP+HNNTFVTVT+
Sbjct: 1 AGRSLKSMNFVQSISEEDEQLERKNKDFVHLPPIHNNTFVTVTD 44
>gb|AAP76346.1| small subunit ribosomal protein [Stylophorum diphyllum]
Length = 132
Score = 83.2 bits (204), Expect = 3e-13
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -2
Query: 1418 AGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AGRS KSMNFVQ+I +EDEQLERKNKDFVHLPP+HNNTFVTVT+
Sbjct: 1 AGRSLKSMNFVQSISKEDEQLERKNKDFVHLPPIHNNTFVTVTD 44
>gb|AAP76364.1| small subunit ribosomal protein [Polyalthia suberosa]
Length = 132
Score = 82.4 bits (202), Expect = 5e-13
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -2
Query: 1418 AGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AGRSFKSMN VQ+I EEDEQ ERKNKDFVHLPP+HNNTFVTVT+
Sbjct: 1 AGRSFKSMNCVQSISEEDEQFERKNKDFVHLPPIHNNTFVTVTD 44
>gb|AAP76355.1| small subunit ribosomal protein [Annona cherimola]
Length = 132
Score = 82.4 bits (202), Expect = 5e-13
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -2
Query: 1418 AGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
AGRSFKSMNFVQ+I +EDEQ ER+NKDFVHLPP+HNNTFVTVT+
Sbjct: 1 AGRSFKSMNFVQSISKEDEQFERENKDFVHLPPIHNNTFVTVTD 44
>gb|AAP76344.1| small subunit ribosomal protein [Berberis thunbergii]
Length = 150
Score = 82.0 bits (201), Expect = 6e-13
Identities = 43/55 (78%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQ--LERKNKDFVHLPPVHNNTFVTVTN 1287
AERIEQQV AGRSFKSMNFVQ+I EEDEQ L+RK K VHL P+HNNTFVTVT+
Sbjct: 8 AERIEQQVSAGRSFKSMNFVQSISEEDEQLKLKRKKKHLVHLLPLHNNTFVTVTD 62
>gb|AAP76347.1| small subunit ribosomal protein [Eschscholzia californica]
Length = 132
Score = 82.0 bits (201), Expect = 6e-13
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -2
Query: 1418 AGRSFKSMNFVQTILEEDEQLERKNKDFVHLPPVHNNTFVTVTN 1287
+GRSFKSMNFVQ+I EEDEQLERKNKDFVHL P+HNNTFVTVT+
Sbjct: 1 SGRSFKSMNFVQSISEEDEQLERKNKDFVHLLPIHNNTFVTVTD 44
>ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup54-like [Vitis vinifera]
Length = 371
Score = 81.3 bits (199), Expect = 1e-12
Identities = 48/82 (58%), Positives = 52/82 (63%)
Frame = +2
Query: 929 MQLQDEVILSDAERLRTTQANVKMVHFLDLYYLKCGKLAMSFMLH*ELYVL*LQRHFQAD 1108
++LQDEVILSDAERLR TQ+NVK+ LQRHFQAD
Sbjct: 197 LKLQDEVILSDAERLRMTQSNVKL----------------------------LQRHFQAD 228
Query: 1109 TLPLIQRMRQKEQGLQRRLLRV 1174
TLP IQRMRQKEQGLQRRLLRV
Sbjct: 229 TLPWIQRMRQKEQGLQRRLLRV 250
>emb|CBI27624.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 81.3 bits (199), Expect = 1e-12
Identities = 48/82 (58%), Positives = 52/82 (63%)
Frame = +2
Query: 929 MQLQDEVILSDAERLRTTQANVKMVHFLDLYYLKCGKLAMSFMLH*ELYVL*LQRHFQAD 1108
++LQDEVILSDAERLR TQ+NVK+ LQRHFQAD
Sbjct: 91 LKLQDEVILSDAERLRMTQSNVKL----------------------------LQRHFQAD 122
Query: 1109 TLPLIQRMRQKEQGLQRRLLRV 1174
TLP IQRMRQKEQGLQRRLLRV
Sbjct: 123 TLPWIQRMRQKEQGLQRRLLRV 144
>gb|AAP76341.1| small subunit ribosomal protein [Weigela hortensis]
Length = 147
Score = 81.3 bits (199), Expect = 1e-12
Identities = 42/55 (76%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Frame = -2
Query: 1445 AERIEQQVFAGRSFKSMNFVQTILEEDEQLERKNK--DFVHLPPVHNNTFVTVTN 1287
AER+EQQVFAGR+ MNFVQ+I EEDEQLERK K DFVHLPP+HN TFVTVT+
Sbjct: 8 AERVEQQVFAGRT---MNFVQSISEEDEQLERKRKIKDFVHLPPIHNKTFVTVTD 59