BLASTX nr result
ID: Cocculus23_contig00026080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026080
(873 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera] 131 4e-28
ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241... 130 7e-28
ref|XP_006447081.1| hypothetical protein CICLE_v10016867mg [Citr... 125 2e-26
ref|XP_007215062.1| hypothetical protein PRUPE_ppa012283mg [Prun... 122 1e-25
ref|XP_007151530.1| hypothetical protein PHAVU_004G054500g [Phas... 122 2e-25
ref|XP_006357191.1| PREDICTED: uncharacterized protein LOC102602... 121 3e-25
ref|XP_004233297.1| PREDICTED: uncharacterized protein LOC101248... 121 3e-25
ref|XP_003553848.1| PREDICTED: uncharacterized protein LOC100790... 121 3e-25
ref|XP_002300102.1| GLUCOSE HYPERSENSITIVE 1 family protein [Pop... 119 1e-24
ref|XP_007031852.1| Ribosomal protein S21 family protein isoform... 119 2e-24
gb|EXC31328.1| 30S ribosomal protein S21 [Morus notabilis] 117 6e-24
ref|XP_004303982.1| PREDICTED: uncharacterized protein LOC101292... 117 6e-24
ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216... 115 2e-23
ref|XP_003524616.1| PREDICTED: uncharacterized protein LOC100777... 115 2e-23
pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 3... 115 2e-23
ref|XP_006290382.1| hypothetical protein CARUB_v10018089mg [Caps... 114 4e-23
gb|AFK33554.1| unknown [Lotus japonicus] 112 2e-22
ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arab... 111 3e-22
ref|NP_566809.1| plastid ribosomal protein S21 [Arabidopsis thal... 110 5e-22
gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|186553... 110 9e-22
>emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]
Length = 188
Score = 131 bits (329), Expect = 4e-28
Identities = 82/193 (42%), Positives = 99/193 (51%)
Frame = +1
Query: 61 AMAASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
A ++S++SNF S L PS KTPPP+ R
Sbjct: 3 ASSSSSISNFLSFLLPSXPXLP-KTPPPN---FISPPPHADPLPTLSVSAPPPSQFDART 58
Query: 241 NRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
RD L+Q S S DLM+VVCPS+AYSNTLFFKS YNVQVIV ++EPEE LL RF
Sbjct: 59 PRDGLLQH-------SSSSDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRF 111
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDA 600
RREVMRAGVIQECKRR+FF Q ++ +
Sbjct: 112 RREVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKK 171
Query: 601 SEDEEDNWDLPEG 639
+DEEDNW++PEG
Sbjct: 172 DDDEEDNWEVPEG 184
>ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera]
Length = 188
Score = 130 bits (327), Expect = 7e-28
Identities = 81/193 (41%), Positives = 99/193 (51%)
Frame = +1
Query: 61 AMAASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
A ++S++SNF S + PS KTPPP+ R
Sbjct: 3 ASSSSSISNFLSFILPS-KPPLPKTPPPN---FISPSPHADPLPTLSVSAPPPSQFDART 58
Query: 241 NRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
RD L+Q S S DLM+VVCPS+AYSNTLFFKS YNVQVIV ++EPEE LL RF
Sbjct: 59 PRDGLLQH-------SSSSDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRF 111
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDA 600
RREVMRAGVIQECKRR+FF Q ++ +
Sbjct: 112 RREVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKK 171
Query: 601 SEDEEDNWDLPEG 639
+DEEDNW++PEG
Sbjct: 172 DDDEEDNWEVPEG 184
>ref|XP_006447081.1| hypothetical protein CICLE_v10016867mg [Citrus clementina]
gi|568831593|ref|XP_006470046.1| PREDICTED:
uncharacterized protein LOC102628693 [Citrus sinensis]
gi|557549692|gb|ESR60321.1| hypothetical protein
CICLE_v10016867mg [Citrus clementina]
Length = 183
Score = 125 bits (315), Expect = 2e-26
Identities = 65/128 (50%), Positives = 80/128 (62%)
Frame = +1
Query: 259 QDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRFRREVMR 438
+ ++ +SS S +L SV+CPS+AY+NTLFFKS YNVQV+V E+EPEE LL RFRREVMR
Sbjct: 54 ESHDSSSASSSSTELASVICPSLAYANTLFFKSAYNVQVVVDENEPEERLLNRFRREVMR 113
Query: 439 AGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDASEDEED 618
AGVIQECKRR+FF VQ + TK +D+ED
Sbjct: 114 AGVIQECKRRRFFETKQDEKKRKTREAAKRNRRRRSQFRVPVQNRQEATPTK-KDDDDED 172
Query: 619 NWDLPEGG 642
NW+LPEGG
Sbjct: 173 NWELPEGG 180
>ref|XP_007215062.1| hypothetical protein PRUPE_ppa012283mg [Prunus persica]
gi|462411212|gb|EMJ16261.1| hypothetical protein
PRUPE_ppa012283mg [Prunus persica]
Length = 176
Score = 122 bits (307), Expect = 1e-25
Identities = 79/194 (40%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Frame = +1
Query: 67 AASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRGNR 246
A+S+L N FS L PS SQ KTPP + + + R
Sbjct: 3 ASSSLCNLFSFLNPSKLPSQPKTPPTQLPML-----------------------QTQKTR 39
Query: 247 DALVQDYEGGCSSSY---SKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRR 417
D + G S+Y S + SV+CPS+AY+NTLFFKS YNVQVIV ++EPEE LL R
Sbjct: 40 DGVAPLMAQGGPSAYGPSSSSVESVICPSLAYANTLFFKSAYNVQVIVDDNEPEERLLNR 99
Query: 418 FRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKD 597
FRREVMRAGVIQE KRR++F QQ + TK
Sbjct: 100 FRREVMRAGVIQETKRRRYFENKQDEKKRRTRDAAKRNKRSRRPFSRPFQQKPEVPETK- 158
Query: 598 ASEDEEDNWDLPEG 639
S+D+ DNWDLP+G
Sbjct: 159 KSDDDGDNWDLPQG 172
>ref|XP_007151530.1| hypothetical protein PHAVU_004G054500g [Phaseolus vulgaris]
gi|561024839|gb|ESW23524.1| hypothetical protein
PHAVU_004G054500g [Phaseolus vulgaris]
Length = 171
Score = 122 bits (305), Expect = 2e-25
Identities = 76/191 (39%), Positives = 94/191 (49%)
Frame = +1
Query: 67 AASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRGNR 246
A+ST++NF S P TK PPPS
Sbjct: 3 ASSTINNFLSFFLP------TKPPPPSTP--------------PPPQFNPTTSSSTHKPS 42
Query: 247 DALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRFRR 426
L+ Y+ SS +L SV+CPSMAYSNTLFF+S YNVQV+V EDEPEE LL RFRR
Sbjct: 43 QPLIAQYDPSSSS----ELSSVICPSMAYSNTLFFQSPYNVQVVVAEDEPEERLLNRFRR 98
Query: 427 EVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDASE 606
EV+RAGVIQEC+RR++F Q+ KQ+ E
Sbjct: 99 EVLRAGVIQECRRRRYFENKQEEKKRKSREAAKRNRKRRPMSKTVAQK--KQDVPATKRE 156
Query: 607 DEEDNWDLPEG 639
+++DNWDLPEG
Sbjct: 157 EDKDNWDLPEG 167
>ref|XP_006357191.1| PREDICTED: uncharacterized protein LOC102602305 [Solanum tuberosum]
Length = 185
Score = 121 bits (304), Expect = 3e-25
Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +1
Query: 283 SSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRFRREVMRAGVIQECK 462
SS D+M+V CPS+AY+NTL+F+S YNVQVIVG++EPEE LL RFRREVMRAGVIQECK
Sbjct: 64 SSSDSDVMAVTCPSLAYANTLYFRSAYNVQVIVGDNEPEEKLLGRFRREVMRAGVIQECK 123
Query: 463 RRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDASEDE-EDNWDLPEG 639
RR++F DKQETTK +D+ EDNW+LP+G
Sbjct: 124 RRRYFENSQDEKKRRTRDAARRNRRRRGPPRNFSD--DKQETTKSKRDDDGEDNWELPDG 181
Query: 640 G 642
G
Sbjct: 182 G 182
>ref|XP_004233297.1| PREDICTED: uncharacterized protein LOC101248838 [Solanum
lycopersicum]
Length = 185
Score = 121 bits (304), Expect = 3e-25
Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +1
Query: 283 SSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRFRREVMRAGVIQECK 462
SS D+M+V CPS+AY+NTL+F+S YNVQVIVG++EPEE LL RFRREVMRAGVIQECK
Sbjct: 64 SSSDSDVMAVTCPSLAYANTLYFRSAYNVQVIVGDNEPEEKLLGRFRREVMRAGVIQECK 123
Query: 463 RRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDASEDE-EDNWDLPEG 639
RR++F DKQETTK +D+ EDNW+LP+G
Sbjct: 124 RRRYFENSQDEKKRRTRDAARRNRRRRGPPRNFSD--DKQETTKSKRDDDGEDNWELPDG 181
Query: 640 G 642
G
Sbjct: 182 G 182
>ref|XP_003553848.1| PREDICTED: uncharacterized protein LOC100790222 [Glycine max]
Length = 185
Score = 121 bits (304), Expect = 3e-25
Identities = 78/197 (39%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Frame = +1
Query: 67 AASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRGNR 246
A+ST++NFFS P TK PPPS ++ +
Sbjct: 3 ASSTINNFFSFFLP------TKPPPPSPP--------QFNPTTTTTTPMNPSSQTHKPSS 48
Query: 247 DALVQDYE------GGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEAL 408
L+ Y CSSS +L SV+CPSMAYSNTLFF+S YNVQV+V EDE EE L
Sbjct: 49 QPLIAQYNPPPPSPSSCSSS--SELSSVICPSMAYSNTLFFQSPYNVQVVVAEDETEEKL 106
Query: 409 LRRFRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQET 588
L RFRREV +AGV+QEC+RR++F Q+ KQ+
Sbjct: 107 LGRFRREVTKAGVVQECRRRRYFENKHEEKKRKSREAARRNRKRLPMSKTVGQK--KQDV 164
Query: 589 TKDASEDEEDNWDLPEG 639
ED+EDNWDLPEG
Sbjct: 165 PATKREDDEDNWDLPEG 181
>ref|XP_002300102.1| GLUCOSE HYPERSENSITIVE 1 family protein [Populus trichocarpa]
gi|118487561|gb|ABK95607.1| unknown [Populus
trichocarpa] gi|222847360|gb|EEE84907.1| GLUCOSE
HYPERSENSITIVE 1 family protein [Populus trichocarpa]
Length = 176
Score = 119 bits (299), Expect = 1e-24
Identities = 75/193 (38%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
MA S +L NF S PS +T PPP +
Sbjct: 1 MATSLSLPNFLSFFSPSNPPPKTPVPPPQLSFSTPQAQKYKSLLFS-------------- 46
Query: 241 NRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
Q+ +GG S S +L SVVCPS+AYSNTLFFKS YNVQV+V ++EPEE LL RF
Sbjct: 47 ------QENDGGHCGSLSTELSSVVCPSLAYSNTLFFKSAYNVQVVVEDNEPEERLLNRF 100
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDA 600
RREVMRAGVIQECKRR+F Q + +K
Sbjct: 101 RREVMRAGVIQECKRRRFHENKQEEKKRKVREAHKRNRRRRPQMRGPFQNKPEASPSK-K 159
Query: 601 SEDEEDNWDLPEG 639
++D++DNW++PEG
Sbjct: 160 NDDDDDNWEMPEG 172
>ref|XP_007031852.1| Ribosomal protein S21 family protein isoform 1 [Theobroma cacao]
gi|590647265|ref|XP_007031853.1| Ribosomal protein S21
family protein isoform 1 [Theobroma cacao]
gi|508710881|gb|EOY02778.1| Ribosomal protein S21 family
protein isoform 1 [Theobroma cacao]
gi|508710882|gb|EOY02779.1| Ribosomal protein S21 family
protein isoform 1 [Theobroma cacao]
Length = 175
Score = 119 bits (297), Expect = 2e-24
Identities = 79/194 (40%), Positives = 99/194 (51%), Gaps = 2/194 (1%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
MA S +LSNF S L PS PPP +A +
Sbjct: 1 MATSLSLSNFLSFLLPS-----NPPPPPPKAAPLNNLYLSS----------------QKP 39
Query: 241 NRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
L + SSS S +L +V+CPS+AY+NTLFFKS YNVQVIV ++EPEE LL RF
Sbjct: 40 KNTFLSVSAQEDQSSSLSTELSAVICPSLAYANTLFFKSAYNVQVIVDDNEPEERLLNRF 99
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQE-TTKD 597
RREVMRAGVIQECKRR+FF + +KQE ++K
Sbjct: 100 RREVMRAGVIQECKRRRFFENKQDEKKRKSREAAKRNRRRRPQARSSLP--NKQEVSSKK 157
Query: 598 ASEDEEDNWDLPEG 639
+DEEDNW++P+G
Sbjct: 158 RDDDEEDNWEMPDG 171
>gb|EXC31328.1| 30S ribosomal protein S21 [Morus notabilis]
Length = 182
Score = 117 bits (293), Expect = 6e-24
Identities = 74/195 (37%), Positives = 95/195 (48%), Gaps = 2/195 (1%)
Frame = +1
Query: 61 AMAASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
A ++S LSNF S + P+ Q K PPP ++ G
Sbjct: 2 AASSSPLSNFLSFILPTKPPPQHKAPPPQLSLSAPHKDNKLTTTTTQY-----------G 50
Query: 241 NRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
++ Q L SV+CPS+AY+NTLFFKS YNVQV+V ++EPEE LL RF
Sbjct: 51 QHGSVAQ------VEPEKSSLSSVICPSLAYANTLFFKSAYNVQVVVDDNEPEERLLNRF 104
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQET--TK 594
RREVMRAGVIQECKRR+F Q ++QET +
Sbjct: 105 RREVMRAGVIQECKRRRFHENKQDEKKRKTREAAKRNRRRRPPPPRFSAQ-NRQETPPSS 163
Query: 595 DASEDEEDNWDLPEG 639
+++EDNWDLPEG
Sbjct: 164 KKQDEDEDNWDLPEG 178
>ref|XP_004303982.1| PREDICTED: uncharacterized protein LOC101292725 [Fragaria vesca
subsp. vesca]
Length = 179
Score = 117 bits (293), Expect = 6e-24
Identities = 83/198 (41%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
MAAS +L NF S L P+ SQTK PPP + + +
Sbjct: 1 MAASYSLCNFLSFLTPTKPPSQTKPPPPHLHLS-----------------------QTQK 37
Query: 241 NRDA---LVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALL 411
RDA LV SSS S +L SV+ PS+AY+NTLFFKS YNVQVIV E E EE LL
Sbjct: 38 PRDAFVPLVAQPGPSFSSSSSSELESVINPSLAYANTLFFKSAYNVQVIVDEGESEERLL 97
Query: 412 RRFRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQ--VDKQE 585
RFRREVMRAGVIQE KRR++F + Q +
Sbjct: 98 NRFRREVMRAGVIQEVKRRRYFENTQDEKKRRTRDAAKRNKRRRTFSRPPLMQNRQGQDV 157
Query: 586 TTKDASEDEEDNWDLPEG 639
S+D+EDNWDLPEG
Sbjct: 158 PVPKKSDDDEDNWDLPEG 175
>ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216973 [Cucumis sativus]
gi|449523367|ref|XP_004168695.1| PREDICTED:
uncharacterized protein LOC101228071 [Cucumis sativus]
Length = 183
Score = 115 bits (289), Expect = 2e-23
Identities = 73/188 (38%), Positives = 92/188 (48%)
Frame = +1
Query: 73 STLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRGNRDA 252
++LS+FFS L PS K PPP ++R A
Sbjct: 2 ASLSSFFSFLLPS------KPPPPKP----HQPFIASSPSPSNHAAPQFQTLKSRDGSVA 51
Query: 253 LVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRFRREV 432
L S S +L SV+CPS+AY+NT+FF+S YNVQV+V ++EPEE LL RFRREV
Sbjct: 52 LNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREV 111
Query: 433 MRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDASEDE 612
MRAGVIQECKRR+FF Q +KQ+ E +
Sbjct: 112 MRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQ--NKQDVPATKQEAD 169
Query: 613 EDNWDLPE 636
+DNWDLPE
Sbjct: 170 DDNWDLPE 177
>ref|XP_003524616.1| PREDICTED: uncharacterized protein LOC100777605 isoform X1 [Glycine
max]
Length = 176
Score = 115 bits (289), Expect = 2e-23
Identities = 73/193 (37%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Frame = +1
Query: 67 AASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRGNR 246
A+ST++NF S +TK PPP + +
Sbjct: 3 ASSTINNFLSFFL------RTKPPPPPSP---------------PQFNPTTSQNQKPSSS 41
Query: 247 DALVQDYEGGCSSSY--SKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
L+ Y S S S +L SV+CPSMAYSNTLFF+S YNVQV+V EDE EE LL RF
Sbjct: 42 QPLIAQYNPPPSPSCASSSELSSVICPSMAYSNTLFFRSPYNVQVVVAEDESEEKLLGRF 101
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDA 600
RREV++AG++QEC+RR++F Q+ KQ+ +
Sbjct: 102 RREVIKAGIVQECRRRRYFENKHEEKKRKSREAARCNRKRRPMSKTVGQK--KQDVSATK 159
Query: 601 SEDEEDNWDLPEG 639
ED+EDNWDLPEG
Sbjct: 160 REDDEDNWDLPEG 172
>pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
gi|17154781|gb|AAL35983.1|AF104396_1 ribosome-like
protein [Cucumis sativus]
Length = 190
Score = 115 bits (289), Expect = 2e-23
Identities = 73/188 (38%), Positives = 92/188 (48%)
Frame = +1
Query: 73 STLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRGNRDA 252
++LS+FFS L PS K PPP ++R A
Sbjct: 9 ASLSSFFSFLLPS------KPPPPKP----HQPFIASSPSPSNHAAPQFQTLKSRDGSVA 58
Query: 253 LVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRFRREV 432
L S S +L SV+CPS+AY+NT+FF+S YNVQV+V ++EPEE LL RFRREV
Sbjct: 59 LNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREV 118
Query: 433 MRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDASEDE 612
MRAGVIQECKRR+FF Q +KQ+ E +
Sbjct: 119 MRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQ--NKQDVPATKQEAD 176
Query: 613 EDNWDLPE 636
+DNWDLPE
Sbjct: 177 DDNWDLPE 184
>ref|XP_006290382.1| hypothetical protein CARUB_v10018089mg [Capsella rubella]
gi|482559089|gb|EOA23280.1| hypothetical protein
CARUB_v10018089mg [Capsella rubella]
Length = 183
Score = 114 bits (286), Expect = 4e-23
Identities = 78/202 (38%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTK-TPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNR 237
MAAS +L++F S + P +SQTK TPPP+ + RN
Sbjct: 1 MAASFSLTSFISFISPF--KSQTKPTPPPNITLPSPSVTQRR---------------RND 43
Query: 238 GNRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRR 417
+ +++ D SS S +L SV+CPS+AYSNTLFF SGYNVQV V ++E EE L+ R
Sbjct: 44 LSIESMAVDESSSTGSSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNR 103
Query: 418 FRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKD 597
FRREVMR GVIQECKRR++F Q QET ++
Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRP------QARFTQETREE 157
Query: 598 AS--------EDEEDNWDLPEG 639
A+ ++EEDNW++P+G
Sbjct: 158 AAAATKSKKKDEEEDNWEMPDG 179
>gb|AFK33554.1| unknown [Lotus japonicus]
Length = 182
Score = 112 bits (280), Expect = 2e-22
Identities = 73/193 (37%), Positives = 87/193 (45%)
Frame = +1
Query: 61 AMAASTLSNFFSVLFPSLTQSQTKTPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNRG 240
A++ S+L NF S L P TK P P +
Sbjct: 2 AVSTSSLPNFLSFLLP------TKQPSPPPQLNLPSSSPLPSHTLKMMKPSHNSASPTTP 55
Query: 241 NRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRRF 420
RD D +L SVVCPS+AYSNTLFF+S YNVQV+VGE+E EE LL RF
Sbjct: 56 RRDGPSCD-----------ELSSVVCPSLAYSNTLFFRSAYNVQVVVGEEEGEERLLNRF 104
Query: 421 RREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKDA 600
RREVM+AGVIQECKRR+FF Q + T
Sbjct: 105 RREVMKAGVIQECKRRRFFENKQDEKKRKHRDAAKRASRARRPFTKFSAQNKQDVPTTTK 164
Query: 601 SEDEEDNWDLPEG 639
++DNWDLPEG
Sbjct: 165 KVKDDDNWDLPEG 177
>ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp.
lyrata] gi|297321197|gb|EFH51618.1| hypothetical protein
ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 111 bits (278), Expect = 3e-22
Identities = 78/203 (38%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTK-TPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNR 237
MAAS +L++F S + P +SQTK TPPP+ + RN
Sbjct: 1 MAASFSLTSFISFISPF--KSQTKPTPPPNLTLPSPTISQRR---------------RND 43
Query: 238 GNRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRR 417
+++ D +SS S +L SV+CPS+AYSNTLFF SGYNVQV V ++E EE L+ R
Sbjct: 44 LAIESMSVDESSSTASSISSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNR 103
Query: 418 FRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKD 597
FRREVMR GVIQECKRR++F Q QET ++
Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRP------QARFTQETREE 157
Query: 598 AS---------EDEEDNWDLPEG 639
A+ ++EEDNW++P G
Sbjct: 158 AAAAATKSKKKDEEEDNWEMPGG 180
>ref|NP_566809.1| plastid ribosomal protein S21 [Arabidopsis thaliana]
gi|9294081|dbj|BAB01933.1| unnamed protein product
[Arabidopsis thaliana] gi|332643753|gb|AEE77274.1|
plastid ribosomal protein S21 [Arabidopsis thaliana]
Length = 183
Score = 110 bits (276), Expect = 5e-22
Identities = 77/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTK-TPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNR 237
MAAS +L++F S + P +SQTK TPPP+ + RN
Sbjct: 1 MAASFSLTSFISFISPF--KSQTKPTPPPNLTLPSPTISQRR---------------RND 43
Query: 238 GNRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRR 417
+++ + +SS S +L SV+CPS+AYSNTLFF SGYNVQV V ++E EE L+ R
Sbjct: 44 LAIESMAVEETSSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNR 103
Query: 418 FRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQQVDKQETTKD 597
FRREVMR GVIQECKRR++F Q QET ++
Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRP------QARFTQETREE 157
Query: 598 AS--------EDEEDNWDLPEG 639
A+ ++EEDNW++P G
Sbjct: 158 AAAATKSKKKDEEEDNWEMPGG 179
>gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|18655399|gb|AAL76155.1|
AT3g27160/MYF5_3 [Arabidopsis thaliana]
Length = 183
Score = 110 bits (274), Expect = 9e-22
Identities = 75/196 (38%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Frame = +1
Query: 64 MAAS-TLSNFFSVLFPSLTQSQTK-TPPPSQAIXXXXXXXXXXXXXXXXXXXXXXXXRNR 237
MAAS +L++F S + P +SQTK TPPP+ + RN
Sbjct: 1 MAASFSLTSFISFISPF--KSQTKPTPPPNLTLPSPTISQRR---------------RND 43
Query: 238 GNRDALVQDYEGGCSSSYSKDLMSVVCPSMAYSNTLFFKSGYNVQVIVGEDEPEEALLRR 417
+++ + +SS S +L SV+CPS+AYSNTLFF SGYNVQV V ++E EE L+ R
Sbjct: 44 LAIESMAVEETSSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNR 103
Query: 418 FRREVMRAGVIQECKRRKFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQ-QVDKQETTK 594
FRREVMR GVIQECKRR++F + + + TK
Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATK 163
Query: 595 DASEDEE-DNWDLPEG 639
+DEE DNW++P G
Sbjct: 164 SKKKDEEKDNWEMPGG 179