BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00026044
         (258 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007475547.1| PsbC (chloroplast) [Podocarpus totara] gi|59...    61   2e-09
gb|AER45599.1| psbC (chloroplast) [Halocarpus kirkii]                  61   2e-09
ref|YP_008965107.1| photosystem II 44 kDa protein (chloroplast) ...    61   2e-09
ref|YP_008378782.1| photosystem II 44 kDa protein (chloroplast) ...    62   2e-09
gb|AAQ04796.1| photosystem II CP43 protein [Podocarpus macrophyl...    61   2e-09
gb|AAV84670.1| photosystem II CP43 protein [Saxegothaea conspicua]     61   2e-09
gb|AFJ73108.1| photosystem II CP43 protein, partial (chloroplast...    62   2e-09
gb|ACA49225.1| photosystem II CP43 protein [Vandenboschia davall...    62   2e-09
gb|AET49436.1| photosytem II 44 kDa protein (chloroplast) [Pinus...    61   2e-09
gb|AET46417.1| photosytem II 44 kDa protein (chloroplast) [Pseud...    61   2e-09
ref|YP_008474470.1| photosystem II CP43 chlorophyll apoprotein (...    61   2e-09
gb|AFA27414.1| photosystem II CP43 chlorophyll apoprotein, parti...    61   2e-09
dbj|BAK86720.1| photosystem II 44 kDa protein (chloroplast) [Sci...    61   2e-09
emb|CAA25802.1| unnamed protein product [Marchantia polymorpha]        61   2e-09
gb|AHL69534.1| PsbC (chloroplast) [Taxus mairei]                       61   2e-09
ref|YP_009026646.1| photosystem II CP43 chlorophyll apoprotein (...    61   2e-09
ref|YP_008965183.1| photosystem II 44 kDa protein (chloroplast) ...    61   2e-09
ref|YP_007890239.1| photosystem II 44 kDa protein (chloroplast) ...    61   2e-09
ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) ...    61   2e-09
ref|NP_817258.1| photosystem II 44 kDa protein [Pinus koraiensis...    61   2e-09

>ref|YP_007475547.1| PsbC (chloroplast) [Podocarpus totara]
           gi|595790013|ref|YP_009020333.1| photosystem II CP43
           chlorophyll apoprotein (chloroplast) [Podocarpus
           lambertii] gi|354991455|gb|AER45601.1| psbC
           (chloroplast) [Podocarpus totara]
           gi|449020347|gb|AGE65843.1| PsbC (chloroplast)
           [Podocarpus totara] gi|589913265|gb|AHL24772.1|
           photosystem II CP43 chlorophyll apoprotein (chloroplast)
           [Podocarpus lambertii]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH LV PETLE S
Sbjct: 126 GFGGIYHALVGPETLEES 143


>gb|AER45599.1| psbC (chloroplast) [Halocarpus kirkii]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH LV PETLE S
Sbjct: 126 GFGGIYHALVGPETLEES 143


>ref|YP_008965107.1| photosystem II 44 kDa protein (chloroplast) [Nageia nagi]
           gi|347977829|dbj|BAK86668.1| photosystem II 44 kDa
           protein (chloroplast) [Nageia nagi]
           gi|563317692|dbj|BAO19791.1| photosystem II 44 kDa
           protein (chloroplast) [Nageia nagi]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH LV PETLE S
Sbjct: 126 GFGGIYHALVGPETLEES 143


>ref|YP_008378782.1| photosystem II 44 kDa protein (chloroplast) [Najas flexilis]
           gi|427920102|gb|AFY64133.1| photosystem II 44 kDa
           protein (chloroplast) [Najas flexilis]
          Length = 461

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +3

Query: 48  LPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           LPYLATLGW VGPGGE IDTFP+FVS VLHLI
Sbjct: 77  LPYLATLGWGVGPGGEVIDTFPYFVSGVLHLI 108



 Score = 25.4 bits (54), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 114 GFGGIYHALLGPETLEES 131


>gb|AAQ04796.1| photosystem II CP43 protein [Podocarpus macrophyllus var. maki]
          Length = 423

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH LV PETLE S
Sbjct: 126 GFGGIYHALVGPETLEES 143


>gb|AAV84670.1| photosystem II CP43 protein [Saxegothaea conspicua]
          Length = 418

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH LV PETLE S
Sbjct: 126 GFGGIYHALVGPETLEES 143


>gb|AFJ73108.1| photosystem II CP43 protein, partial (chloroplast) [Tetrodontium
           brownianum]
          Length = 412

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE IDTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIIDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143


>gb|ACA49225.1| photosystem II CP43 protein [Vandenboschia davallioides]
          Length = 200

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE IDTFP+FVS VLHLI
Sbjct: 16  LILLPHLATLGWGVGPGGEIIDTFPYFVSGVLHLI 50



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 56  GFGGIYHALIGPETLEES 73


>gb|AET49436.1| photosytem II 44 kDa protein (chloroplast) [Pinus fenzeliana var.
           dabeshanensis]
          Length = 542

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143


>gb|AET46417.1| photosytem II 44 kDa protein (chloroplast) [Pseudotsuga menziesii
           var. menziesii]
          Length = 505

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 118 LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 152



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 158 GFGGIYHALIGPETLEES 175


>ref|YP_008474470.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Lygodium
           japonicum] gi|474452424|gb|AGI51412.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Lygodium
           japonicum]
          Length = 487

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE IDTFP+FVS VLHLI
Sbjct: 100 LILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 134



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 140 GFGGIYHALIGPETLEES 157


>gb|AFA27414.1| photosystem II CP43 chlorophyll apoprotein, partial [Apostasia
           wallichii]
          Length = 487

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE IDTFP+FVS VLHLI
Sbjct: 100 LILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 134



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 140 GFGGIYHALIGPETLEES 157


>dbj|BAK86720.1| photosystem II 44 kDa protein (chloroplast) [Sciadopitys
           verticillata]
          Length = 487

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 100 LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 134



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 140 GFGGIYHALIGPETLEES 157


>emb|CAA25802.1| unnamed protein product [Marchantia polymorpha]
          Length = 487

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 100 LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 134



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 140 GFGGIYHALIGPETLEES 157


>gb|AHL69534.1| PsbC (chloroplast) [Taxus mairei]
          Length = 476

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 89  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 123



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 129 GFGGIYHALIGPETLEES 146


>ref|YP_009026646.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           monosperma] gi|619271823|ref|YP_009026736.1| photosystem
           II CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           scopulorum] gi|619275673|ref|YP_009026810.1| photosystem
           II CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           virginiana] gi|576597818|gb|AHH30072.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           bermudiana] gi|576597889|gb|AHH30142.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           monosperma] gi|576597982|gb|AHH30234.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           scopulorum] gi|576598058|gb|AHH30309.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Juniperus
           virginiana]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143


>ref|YP_008965183.1| photosystem II 44 kDa protein (chloroplast) [Calocedrus formosana]
           gi|482841027|dbj|BAN16975.1| photosystem II 44 kDa
           protein (chloroplast) [Calocedrus formosana]
           gi|563317768|dbj|BAO19866.1| photosystem II 44 kDa
           protein (chloroplast) [Calocedrus formosana]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143


>ref|YP_007890239.1| photosystem II 44 kDa protein (chloroplast) [Cephalotaxus oliveri]
           gi|429128533|gb|AFZ65549.1| photosystem II 44 kDa
           protein (chloroplast) [Cephalotaxus oliveri]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143


>ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei]
           gi|372863278|gb|AEX99349.1| photosystem II 44 kDa
           protein (chloroplast) [Taxus mairei]
           gi|372863355|gb|AEX99425.1| photosystem II 44 kDa
           protein (chloroplast) [Taxus mairei]
           gi|372863519|gb|AEX99587.1| photosystem II 44 kDa
           protein (chloroplast) [Taxus mairei]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143


>ref|NP_817258.1| photosystem II 44 kDa protein [Pinus koraiensis]
           gi|324986402|ref|YP_004276274.1| photosytem II 44 kDa
           protein [Pinus lambertiana]
           gi|75243872|sp|Q85WW6.1|PSBC_PINKO RecName:
           Full=Photosystem II CP43 chlorophyll apoprotein;
           AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|29469775|gb|AAO74103.1| PSII 44kDa
           protein [Pinus koraiensis] gi|228016157|gb|ACP50994.1|
           photosystem II 44 kDa protein [Pinus sibirica]
           gi|228016663|gb|ACP51492.1| photosystem II 44 kDa
           protein [Pinus albicaulis] gi|228017165|gb|ACP51986.1|
           photosystem II 44 kDa protein [Pinus cembra]
           gi|228017609|gb|ACP52423.1| photosystem II 44 kDa
           protein [Pinus parviflora var. pentaphylla]
           gi|323514251|gb|ADX89798.1| photosytem II 44 kDa protein
           [Pinus lambertiana] gi|356997080|gb|AET44991.1|
           photosytem II 44 kDa protein (chloroplast) [Pinus
           amamiana] gi|356997367|gb|AET45274.1| photosytem II 44
           kDa protein (chloroplast) [Pinus wallichiana]
           gi|356998385|gb|AET46278.1| photosytem II 44 kDa protein
           (chloroplast) [Pinus pumila] gi|356999401|gb|AET47280.1|
           photosytem II 44 kDa protein (chloroplast) [Pinus
           morrisonicola] gi|357001518|gb|AET49368.1| photosytem II
           44 kDa protein (chloroplast) [Pinus dalatensis]
          Length = 473

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 39  LFSLPYLATLGWRVGPGGEFIDTFPFFVSRVLHLI 143
           L  LP+LATLGW VGPGGE +DTFP+FVS VLHLI
Sbjct: 86  LILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 158 GFVVIYHLLVQPETLEIS 211
           GF  IYH L+ PETLE S
Sbjct: 126 GFGGIYHALIGPETLEES 143