BLASTX nr result
ID: Cocculus23_contig00026026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026026
(219 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 91 2e-16
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 89 8e-16
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 88 1e-15
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 87 2e-15
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 87 2e-15
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 86 5e-15
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 86 5e-15
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 85 9e-15
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 85 9e-15
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 85 1e-14
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 84 2e-14
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 84 3e-14
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 84 3e-14
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 82 8e-14
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 80 2e-13
ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas... 80 4e-13
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 79 5e-13
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 79 5e-13
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 79 5e-13
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya] 79 8e-13
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA
polymerase, putative [Ricinus communis]
Length = 1203
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/73 (58%), Positives = 50/73 (68%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFK VHV+IGTL S EF VGW+ P SGVD +VD FD C+ FT TA
Sbjct: 120 LNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTA 179
Query: 39 FSLNGTEESAVIK 1
FS GT E AVI+
Sbjct: 180 FSFKGTTEHAVIR 192
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFK V V+IGTL S EF+VGW+ P +GVD +VD FD TCR F+ TA
Sbjct: 120 LNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTA 179
Query: 39 FSLNGTEESAVIK 1
FS T E AVIK
Sbjct: 180 FSFKSTAEHAVIK 192
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V V++G L S+H+F VGW+ P +GVD +VD F+ TC+ILFT+ T
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTV 178
Query: 39 FSLNGTEESAVIK 1
FS G A+IK
Sbjct: 179 FSFRGEARHAIIK 191
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/73 (56%), Positives = 49/73 (67%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFK V +IG L S EF+VGW+ P SGVD +VD FD TC+ F+ TA
Sbjct: 120 LNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTA 179
Query: 39 FSLNGTEESAVIK 1
FSL T E AVIK
Sbjct: 180 FSLKSTSEHAVIK 192
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V ++IG L S E++ GW+ P+SGVD +VD FD TC+ LFT+ TA
Sbjct: 120 LNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTA 179
Query: 39 FSLNGTEESAVIK 1
FS G + AVIK
Sbjct: 180 FSFKGMPKHAVIK 192
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V V++G L S+ +F VGW+ P +GVD +VD F+ TC+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTA 178
Query: 39 FSLNGTEESAVIK 1
FS G A+IK
Sbjct: 179 FSFRGEARHAIIK 191
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V V++G L S+ +F VGW+ P +GVD +VD F+ TC+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTA 178
Query: 39 FSLNGTEESAVIK 1
FS G A+IK
Sbjct: 179 FSFRGEARHAIIK 191
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/73 (54%), Positives = 49/73 (67%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRRNT PFK V + IG + S EF+VGW+ P GVD +VD FD TC+ F+ TA
Sbjct: 120 LNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTA 179
Query: 39 FSLNGTEESAVIK 1
FS GT E AVIK
Sbjct: 180 FSFKGTTEYAVIK 192
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V V++G L S+ +F VGW+ P +GVD VD F+ TC+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTA 178
Query: 39 FSLNGTEESAVIK 1
FS G A+IK
Sbjct: 179 FSFRGEARHAIIK 191
>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
gi|462422376|gb|EMJ26639.1| hypothetical protein
PRUPE_ppa000422mg [Prunus persica]
Length = 1196
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR PFK VHV+IG+L + EF+ W+ P GVD +VD FD TC+ FT TA
Sbjct: 119 LNRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTA 178
Query: 39 FSLNGTEESAVIK 1
FS GT++ AVIK
Sbjct: 179 FSFKGTKKHAVIK 191
>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
6 [Gossypium hirsutum]
Length = 1196
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR+T PFK V ++IGTL S EF VGW+ P SGV+ +VD FD TC+ F+ TA
Sbjct: 120 LNRRRRDTTPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSRDTA 179
Query: 39 FSLNGTEESAVIK 1
FS GT E AVIK
Sbjct: 180 FSFKGTNEHAVIK 192
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V V++G L S+ +F VGW+ P +GVD VD F+ C+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTA 178
Query: 39 FSLNGTEESAVIK 1
FS G + A+IK
Sbjct: 179 FSFRGEAKHAIIK 191
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFKF V +++G L S+ +F VGW+ P +GVD +VD F+ C+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTA 178
Query: 39 FSLNGTEESAVIK 1
FS G A+IK
Sbjct: 179 FSFRGEARHAIIK 191
>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
tuberosum]
Length = 1198
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/73 (54%), Positives = 49/73 (67%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+NKRRR PFKF V V+IG L S +F VGW+ P SGV+ +VD F+ TC+ILFT TA
Sbjct: 119 MNKRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTA 178
Query: 39 FSLNGTEESAVIK 1
F G + AVIK
Sbjct: 179 FCFKGEGKHAVIK 191
>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
max] gi|571459266|ref|XP_006581359.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
max]
Length = 1204
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/73 (53%), Positives = 47/73 (64%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFK V V+IGTL S EF+V W+ P GV +VD FD CR F+ TA
Sbjct: 120 LNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTA 179
Query: 39 FSLNGTEESAVIK 1
FS G E+ AVIK
Sbjct: 180 FSFKGIEKKAVIK 192
>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
gi|561010117|gb|ESW09024.1| hypothetical protein
PHAVU_009G093700g [Phaseolus vulgaris]
Length = 1204
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+NKRRR T PFK V V+IGTL S EF+V WK P GV +VD FD CR FT A
Sbjct: 120 LNKRRRTTIPFKMSDVIVEIGTLVSPGEFFVAWKGPDKGVKFLVDPFDGMCRFCFTRDIA 179
Query: 39 FSLNGTEESAVIK 1
F G E+ AVIK
Sbjct: 180 FPFKGIEKEAVIK 192
>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
sinensis]
Length = 1025
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+R R + PFK V V+IGTL S EF+V W+ PASG D +VD FD TC+ FT A
Sbjct: 120 LNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIA 179
Query: 39 FSLNGTEESAVIK 1
F+L + E AVIK
Sbjct: 180 FALKSSTEHAVIK 192
>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
sinensis]
Length = 1197
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+R R + PFK V V+IGTL S EF+V W+ PASG D +VD FD TC+ FT A
Sbjct: 120 LNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIA 179
Query: 39 FSLNGTEESAVIK 1
F+L + E AVIK
Sbjct: 180 FALKSSTEHAVIK 192
>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
max] gi|571449461|ref|XP_006578148.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
max]
Length = 1204
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR T PFK V V+IGTL S EF+V W+ P GV +VD FD CR F+ TA
Sbjct: 120 LNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTA 179
Query: 39 FSLNGTEESAVIK 1
FS G ++ AVIK
Sbjct: 180 FSFKGIDKKAVIK 192
>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
Length = 1195
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 219 INKRRRNTKPFKFCKVHVQIGTLFSEHEFWVGWKAPASGVDMVVDRFDNTCRILFTEMTA 40
+N+RRR PFK V ++IGTL S EF VGW+ P+SG++ +VD FD TC+ F+ A
Sbjct: 120 MNQRRRTMIPFKLVDVGLEIGTLVSPGEFIVGWRGPSSGIEFLVDPFDRTCKFCFSRDMA 179
Query: 39 FSLNGTEESAVIK 1
FS G+ E AVIK
Sbjct: 180 FSFRGSVEHAVIK 192