BLASTX nr result
ID: Cocculus23_contig00026015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026015
(806 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas... 48 1e-06
ref|XP_007018292.1| Rhamnogalacturonate lyase family protein [Th... 45 2e-06
emb|CBI19298.3| unnamed protein product [Vitis vinifera] 46 6e-06
ref|XP_004288875.1| PREDICTED: rhamnogalacturonate lyase-like [F... 46 6e-06
ref|XP_002301115.1| hypothetical protein POPTR_0002s11100g [Popu... 46 8e-06
ref|XP_006472411.1| PREDICTED: rhamnogalacturonate lyase B-like ... 45 8e-06
ref|XP_006433775.1| hypothetical protein CICLE_v10000543mg [Citr... 45 8e-06
ref|XP_006472412.1| PREDICTED: rhamnogalacturonate lyase B-like ... 45 8e-06
ref|XP_006472413.1| PREDICTED: rhamnogalacturonate lyase B-like ... 45 8e-06
>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
[Vitis vinifera]
Length = 643
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 157 DRMFLKMYSR*SSRDKSRAGYEHFEEWPSFSLAETRMAFKLSQDK 291
D+ F+ + R SS S A YEH +EWP+F+LAETR+AFKL +DK
Sbjct: 110 DKRFIML--RGSSGFYSYAIYEHLKEWPAFTLAETRIAFKLRKDK 152
Score = 31.6 bits (70), Expect(2) = 1e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGH--ATGQPLAYLEAV 475
+F YM ++D RQR M + + GQPLAY EAV
Sbjct: 152 KFHYMAMADNRQRFMPLPDDRLPGRGQPLAYPEAV 186
>ref|XP_007018292.1| Rhamnogalacturonate lyase family protein [Theobroma cacao]
gi|508723620|gb|EOY15517.1| Rhamnogalacturonate lyase
family protein [Theobroma cacao]
Length = 1344
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 157 DRMFLKMYSR*SSRDKSRAGYEHFEEWPSFSLAETRMAFKLSQDK 291
D+ F+ + R SS S A YEHF+EWP F L ETR+ FKL ++K
Sbjct: 150 DKRFIML--RGSSGFYSYAIYEHFKEWPGFELGETRITFKLRKEK 192
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGHATG--QPLAYLEAV 475
+F YM ++D RQR M + +TG QPLAY EAV
Sbjct: 192 KFQYMAIADNRQRYMPFPDDRSTGRCQPLAYPEAV 226
>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 46.2 bits (108), Expect(2) = 6e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 157 DRMFLKMYSR*SSRDKSRAGYEHFEEWPSFSLAETRMAFKLSQD 288
D+ F+ + R SS S A YEH +EWP+F+LAETR+AFKL +D
Sbjct: 110 DKRFIML--RGSSGFYSYAIYEHLKEWPAFTLAETRIAFKLRKD 151
Score = 30.8 bits (68), Expect(2) = 6e-06
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 380 FCYMGLSDIRQRVMSMLEGH--ATGQPLAYLEAV 475
F YM ++D RQR M + + GQPLAY EAV
Sbjct: 165 FHYMAMADNRQRFMPLPDDRLPGRGQPLAYPEAV 198
>ref|XP_004288875.1| PREDICTED: rhamnogalacturonate lyase-like [Fragaria vesca subsp.
vesca]
Length = 640
Score = 45.8 bits (107), Expect(2) = 6e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 157 DRMFLKMYSR*SSRDKSRAGYEHFEEWPSFSLAETRMAFKLSQDK 291
D+ F+ + R SS S A YEH +EWP+F L ETR+AFKL +DK
Sbjct: 112 DKRFVMV--RGSSGFYSYAIYEHLQEWPAFQLGETRIAFKLRKDK 154
Score = 31.2 bits (69), Expect(2) = 6e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGH--ATGQPLAYLEAV 475
+F YM ++D RQR M + + GQPLAY EAV
Sbjct: 154 KFHYMAMADNRQRYMPLPDDRLPLRGQPLAYPEAV 188
>ref|XP_002301115.1| hypothetical protein POPTR_0002s11100g [Populus trichocarpa]
gi|222842841|gb|EEE80388.1| hypothetical protein
POPTR_0002s11100g [Populus trichocarpa]
Length = 731
Score = 45.8 bits (107), Expect(2) = 8e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +1
Query: 157 DRMFLKMYSR*SSRDKSRAGYEHFEEWPSFSLAETRMAFKLSQDK 291
D+ F+ + R SS S A YEHF+EWP+F+L +TR+ FKL +DK
Sbjct: 204 DKRFIML--RNSSGFYSYAIYEHFKEWPAFNLPQTRIVFKLRKDK 246
Score = 30.8 bits (68), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGH--ATGQPLAYLEAV 475
+F YM ++D RQR M + E G+PLAY EAV
Sbjct: 246 KFHYMAVADNRQRCMPLPEDRLPKRGEPLAYPEAV 280
>ref|XP_006472411.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X1 [Citrus
sinensis]
Length = 650
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 217 YEHFEEWPSFSLAETRMAFKLSQDK 291
YEH EEWP F+L ETR+AFKL +DK
Sbjct: 131 YEHLEEWPGFNLGETRIAFKLRKDK 155
Score = 31.6 bits (70), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGHA--TGQPLAYLEAV 475
+F YM ++D RQR M + + GQPLAY EAV
Sbjct: 155 KFHYMAIADNRQRYMPLPDDRVPPRGQPLAYPEAV 189
>ref|XP_006433775.1| hypothetical protein CICLE_v10000543mg [Citrus clementina]
gi|557535897|gb|ESR47015.1| hypothetical protein
CICLE_v10000543mg [Citrus clementina]
Length = 649
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 217 YEHFEEWPSFSLAETRMAFKLSQDK 291
YEH EEWP F+L ETR+AFKL +DK
Sbjct: 131 YEHLEEWPGFNLGETRIAFKLRKDK 155
Score = 31.6 bits (70), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGHA--TGQPLAYLEAV 475
+F YM ++D RQR M + + GQPLAY EAV
Sbjct: 155 KFHYMAIADNRQRYMPLPDDRVPPRGQPLAYPEAV 189
>ref|XP_006472412.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X2 [Citrus
sinensis]
Length = 647
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 217 YEHFEEWPSFSLAETRMAFKLSQDK 291
YEH EEWP F+L ETR+AFKL +DK
Sbjct: 131 YEHLEEWPGFNLGETRIAFKLRKDK 155
Score = 31.6 bits (70), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGHA--TGQPLAYLEAV 475
+F YM ++D RQR M + + GQPLAY EAV
Sbjct: 155 KFHYMAIADNRQRYMPLPDDRVPPRGQPLAYPEAV 189
>ref|XP_006472413.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X3 [Citrus
sinensis]
Length = 638
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 217 YEHFEEWPSFSLAETRMAFKLSQDK 291
YEH EEWP F+L ETR+AFKL +DK
Sbjct: 131 YEHLEEWPGFNLGETRIAFKLRKDK 155
Score = 31.6 bits (70), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 377 RFCYMGLSDIRQRVMSMLEGHA--TGQPLAYLEAV 475
+F YM ++D RQR M + + GQPLAY EAV
Sbjct: 155 KFHYMAIADNRQRYMPLPDDRVPPRGQPLAYPEAV 189