BLASTX nr result
ID: Cocculus23_contig00026009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026009
(207 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359201.1| PREDICTED: pumilio homolog 12-like [Solanum ... 106 4e-21
ref|XP_004228945.1| PREDICTED: uncharacterized protein LOC101252... 103 3e-20
ref|XP_004294948.1| PREDICTED: pumilio homolog 12-like [Fragaria... 102 7e-20
ref|XP_007208074.1| hypothetical protein PRUPE_ppa001655mg [Prun... 102 7e-20
ref|XP_007208073.1| hypothetical protein PRUPE_ppa001655mg [Prun... 102 7e-20
emb|CBI16556.3| unnamed protein product [Vitis vinifera] 102 7e-20
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi... 102 7e-20
ref|XP_006386043.1| hypothetical protein POPTR_0003s20880g [Popu... 100 2e-19
ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu... 99 5e-19
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera] 99 5e-19
ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Popu... 99 6e-19
ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana] gi|313471423|... 99 8e-19
ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata] gi... 99 8e-19
gb|EXC34539.1| Pumilio-12-like protein [Morus notabilis] 98 1e-18
ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citr... 98 1e-18
ref|XP_006279759.1| hypothetical protein CARUB_v10027736mg [Caps... 96 4e-18
ref|XP_006401313.1| hypothetical protein EUTSA_v10015278mg [Eutr... 96 5e-18
dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana] 91 1e-16
emb|CBI29938.3| unnamed protein product [Vitis vinifera] 90 4e-16
ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250... 90 4e-16
>ref|XP_006359201.1| PREDICTED: pumilio homolog 12-like [Solanum tuberosum]
Length = 737
Score = 106 bits (264), Expect = 4e-21
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = -2
Query: 200 PQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFG 21
P++ EF+FE AI +CV L DRHGCCVLQKCLS SDG RH L++EITSNAL+LS D FG
Sbjct: 557 PEYREFLFEAAITNCVELATDRHGCCVLQKCLSQSDGGQRHRLIYEITSNALVLSQDPFG 616
Query: 20 NYVVQY 3
NYVVQY
Sbjct: 617 NYVVQY 622
>ref|XP_004228945.1| PREDICTED: uncharacterized protein LOC101252807 [Solanum
lycopersicum]
Length = 735
Score = 103 bits (256), Expect = 3e-20
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = -2
Query: 200 PQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFG 21
P++ EF+FE AI +CV L DRHGCCVLQKCLS SDG R+ L++EITSNAL+LS D FG
Sbjct: 555 PEYKEFLFEAAITNCVELATDRHGCCVLQKCLSQSDGGQRNRLIYEITSNALVLSQDPFG 614
Query: 20 NYVVQY 3
NYVVQY
Sbjct: 615 NYVVQY 620
>ref|XP_004294948.1| PREDICTED: pumilio homolog 12-like [Fragaria vesca subsp. vesca]
Length = 752
Score = 102 bits (253), Expect = 7e-20
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -2
Query: 200 PQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFG 21
P++ EF+FE A ++C+ L DRHGCCVLQKCLSHSDGE R L+ +ITSNALILS D FG
Sbjct: 572 PEYREFLFEAATSNCIELATDRHGCCVLQKCLSHSDGEQRDRLICKITSNALILSQDPFG 631
Query: 20 NYVVQY 3
NYVVQ+
Sbjct: 632 NYVVQF 637
>ref|XP_007208074.1| hypothetical protein PRUPE_ppa001655mg [Prunus persica]
gi|462403716|gb|EMJ09273.1| hypothetical protein
PRUPE_ppa001655mg [Prunus persica]
Length = 784
Score = 102 bits (253), Expect = 7e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 200 PQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFG 21
P++ EF+FE A +CV L DRHGCCVLQKCLSHSD E R+ L+ EITSNALILS D FG
Sbjct: 603 PEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQDPFG 662
Query: 20 NYVVQY 3
NYVVQ+
Sbjct: 663 NYVVQF 668
>ref|XP_007208073.1| hypothetical protein PRUPE_ppa001655mg [Prunus persica]
gi|462403715|gb|EMJ09272.1| hypothetical protein
PRUPE_ppa001655mg [Prunus persica]
Length = 783
Score = 102 bits (253), Expect = 7e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 200 PQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFG 21
P++ EF+FE A +CV L DRHGCCVLQKCLSHSD E R+ L+ EITSNALILS D FG
Sbjct: 603 PEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQDPFG 662
Query: 20 NYVVQY 3
NYVVQ+
Sbjct: 663 NYVVQF 668
>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 102 bits (253), Expect = 7e-20
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP++ EF+FE AI +CV L DRHGCCVLQKCL HS E R +++EITSNALILS D F
Sbjct: 543 MPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPF 602
Query: 23 GNYVVQY 3
GNYVVQY
Sbjct: 603 GNYVVQY 609
>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 102 bits (253), Expect = 7e-20
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP++ EF+FE AI +CV L DRHGCCVLQKCL HS E R +++EITSNALILS D F
Sbjct: 532 MPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPF 591
Query: 23 GNYVVQY 3
GNYVVQY
Sbjct: 592 GNYVVQY 598
>ref|XP_006386043.1| hypothetical protein POPTR_0003s20880g [Populus trichocarpa]
gi|550343665|gb|ERP63840.1| hypothetical protein
POPTR_0003s20880g [Populus trichocarpa]
Length = 755
Score = 100 bits (249), Expect = 2e-19
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP++ +F+FE +C+ L DRHGCCVLQKCLSHS+GE R LV EITSNALILS D+F
Sbjct: 574 MPEYIDFLFEATTDNCIELATDRHGCCVLQKCLSHSEGEQRSRLVSEITSNALILSQDQF 633
Query: 23 GNYVVQY 3
GNYVVQ+
Sbjct: 634 GNYVVQF 640
>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein,
putative [Ricinus communis]
Length = 771
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = -2
Query: 200 PQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFG 21
P+ EF+FE A +CV L DRHGCCVLQKCLSHS+GE R L+ EITSNALILS D FG
Sbjct: 561 PEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCLISEITSNALILSQDPFG 620
Query: 20 NYVVQY 3
NYVVQ+
Sbjct: 621 NYVVQF 626
>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 99.4 bits (246), Expect = 5e-19
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP++ EF+ E AI +CV L DRHGCCVLQKCL HS E R +++EITSNALILS D F
Sbjct: 573 MPEYREFLXEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPF 632
Query: 23 GNYVVQY 3
GNYVVQY
Sbjct: 633 GNYVVQY 639
>ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Populus trichocarpa]
gi|550346467|gb|ERP65100.1| hypothetical protein
POPTR_0001s03990g [Populus trichocarpa]
Length = 756
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP++ EF+FE A+CV L DRHGCCVLQKCLS S GE R LV EITSNALILS D F
Sbjct: 575 MPEYSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPF 634
Query: 23 GNYVVQY 3
GNYVVQ+
Sbjct: 635 GNYVVQF 641
>ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName:
Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis
thaliana]
Length = 596
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
+P +F+FE AI HCV L DRHGCCVLQKCL +S+GE + HLV EI SNAL+LS D F
Sbjct: 415 LPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPF 474
Query: 23 GNYVVQY 3
GNYV+QY
Sbjct: 475 GNYVLQY 481
>ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
+P +F+FE AI HCV L DRHGCCVLQKCL +S+GE + HLV EI SNAL+LS D F
Sbjct: 417 LPHCGKFLFEAAITHCVDLATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPF 476
Query: 23 GNYVVQY 3
GNYV+QY
Sbjct: 477 GNYVLQY 483
>gb|EXC34539.1| Pumilio-12-like protein [Morus notabilis]
Length = 717
Score = 98.2 bits (243), Expect = 1e-18
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = -2
Query: 188 EFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRFGNYVV 9
+F+F+ A +HCV L KDRHGCCVLQKCL++SDGE R L+ EI SNALILS+D++GNYVV
Sbjct: 541 QFLFDAATSHCVELAKDRHGCCVLQKCLTYSDGERRRRLIHEIASNALILSYDQYGNYVV 600
Query: 8 QY 3
Q+
Sbjct: 601 QF 602
>ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citrus clementina]
gi|568871549|ref|XP_006488946.1| PREDICTED: pumilio
homolog 12-like isoform X1 [Citrus sinensis]
gi|568871551|ref|XP_006488947.1| PREDICTED: pumilio
homolog 12-like isoform X2 [Citrus sinensis]
gi|557548186|gb|ESR58815.1| hypothetical protein
CICLE_v10017802mg [Citrus clementina]
Length = 769
Score = 97.8 bits (242), Expect = 1e-18
Identities = 42/67 (62%), Positives = 54/67 (80%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
+P++ +F+F+ +CV L DRHGCCV+QKCL+HS+GE RH LV +ITSNALILS D F
Sbjct: 588 LPEYSKFLFQATTNNCVELATDRHGCCVIQKCLTHSEGEQRHRLVSKITSNALILSQDPF 647
Query: 23 GNYVVQY 3
GNYVVQ+
Sbjct: 648 GNYVVQF 654
>ref|XP_006279759.1| hypothetical protein CARUB_v10027736mg [Capsella rubella]
gi|482548463|gb|EOA12657.1| hypothetical protein
CARUB_v10027736mg [Capsella rubella]
Length = 614
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
+P +F+FE AI HCV L D+HGCCVLQKCL+HS+GE + LV EI SNAL LS D F
Sbjct: 433 LPHCRKFLFEAAITHCVDLATDKHGCCVLQKCLAHSEGEQKKQLVSEIASNALYLSQDPF 492
Query: 23 GNYVVQY 3
GNYV+QY
Sbjct: 493 GNYVLQY 499
>ref|XP_006401313.1| hypothetical protein EUTSA_v10015278mg [Eutrema salsugineum]
gi|557102403|gb|ESQ42766.1| hypothetical protein
EUTSA_v10015278mg [Eutrema salsugineum]
Length = 608
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
+P +F+FE AI HCV L DRHGC VLQKCL +S+GE + HLV EI SNAL+LS D F
Sbjct: 427 LPHCEKFLFEAAITHCVELATDRHGCVVLQKCLGYSEGETKDHLVSEIASNALLLSQDPF 486
Query: 23 GNYVVQY 3
GNYV+QY
Sbjct: 487 GNYVLQY 493
>dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 8/75 (10%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
+P +F+FE AI HCV L DRHGCCVLQKCL +S+GE + HLV EI SNAL+LS D F
Sbjct: 415 LPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPF 474
Query: 23 G--------NYVVQY 3
G NYV+QY
Sbjct: 475 GIDANFFCRNYVLQY 489
>emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP + EF+FE AHCV L D HGC VLQKCL HSDGE R L+ I +NALILS D F
Sbjct: 533 MPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIANALILSQDPF 592
Query: 23 GNYVVQY 3
GNYVVQY
Sbjct: 593 GNYVVQY 599
>ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = -2
Query: 203 MPQFHEFIFETAIAHCVVLGKDRHGCCVLQKCLSHSDGELRHHLVFEITSNALILSHDRF 24
MP + EF+FE AHCV L D HGC VLQKCL HSDGE R L+ I +NALILS D F
Sbjct: 634 MPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIANALILSQDPF 693
Query: 23 GNYVVQY 3
GNYVVQY
Sbjct: 694 GNYVVQY 700