BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00024462
         (547 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia trip...   205   5e-51
ref|YP_008993596.1| RNA polymerase beta' subunit (chloroplast) [...   205   5e-51
ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [...   205   5e-51
ref|YP_008993166.1| RNA polymerase beta' subunit (chloroplast) [...   205   5e-51
ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) ...   205   5e-51
ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) ...   205   5e-51
ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) ...   205   5e-51
ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwang...   205   5e-51
ref|YP_740192.1| RNA polymerase beta' subunit [Liriodendron tuli...   205   5e-51
ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [...   204   1e-50
ref|YP_008993682.1| RNA polymerase beta' subunit (chloroplast) [...   202   3e-50
ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [...   202   3e-50
ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [...   202   3e-50
ref|YP_008993424.1| RNA polymerase beta' subunit (chloroplast) [...   202   3e-50
gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magn...   202   3e-50
gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magno...   202   3e-50
ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|3...   202   3e-50
ref|YP_740555.1| RNA polymerase beta'' subunit [Platanus occiden...   201   7e-50
ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]...   200   2e-49
gb|AHE41663.1| RNA polymerase beta' subunit, partial (chloroplas...   199   3e-49

>ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia tripetala]
            gi|608608394|gb|AHW51948.1| RNA polymerase beta'' subunit
            [Magnolia tripetala]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993596.1| RNA polymerase beta' subunit (chloroplast) [Magnolia odora]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [Magnolia pyramidata]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993166.1| RNA polymerase beta' subunit (chloroplast) [Magnolia cathcartii]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia grandiflora]
            gi|372862833|gb|AEX98909.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia grandiflora]
            gi|372863003|gb|AEX99077.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia grandiflora]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis
            subsp. biloba] gi|372862494|gb|AEX98574.1| RNA polymerase
            beta subunit-2 (chloroplast) [Magnolia officinalis subsp.
            biloba] gi|372862579|gb|AEX98658.1| RNA polymerase beta
            subunit-2 (chloroplast) [Magnolia officinalis subsp.
            biloba] gi|372862664|gb|AEX98742.1| RNA polymerase beta
            subunit-2 (chloroplast) [Magnolia officinalis subsp.
            biloba]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis]
            gi|372862411|gb|AEX98492.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia officinalis]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwangsiensis]
            gi|302424170|gb|ADL39046.1| RNA polymerase beta' subunit
            [Magnolia kwangsiensis]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_740192.1| RNA polymerase beta' subunit [Liriodendron tulipifera]
            gi|122239950|sp|Q0G9M9.1|RPOC2_LIRTU RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|113200984|gb|ABI32499.1| RNA polymerase beta' subunit
            [Liriodendron tulipifera]
          Length = 1382

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [Magnolia dealbata]
          Length = 1382

 Score =  204 bits (519), Expect = 1e-50
 Identities = 100/112 (89%), Positives = 105/112 (93%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH REL+ SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELVSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993682.1| RNA polymerase beta' subunit (chloroplast) [Magnolia salicifolia]
          Length = 1380

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1268 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1327

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1328 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1379


>ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sprengeri]
          Length = 1382

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliifera]
          Length = 1382

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_008993424.1| RNA polymerase beta' subunit (chloroplast) [Magnolia kobus]
          Length = 1382

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia denudata]
          Length = 1382

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliiflora]
          Length = 1382

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|343887529|gb|AEM65208.1|
            RpoC2 [Magnolia denudata]
          Length = 1382

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/112 (89%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG M DILFH RELL SC+PKNFHDTSEQSFTG  +
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMGDILFHHRELLSSCIPKNFHDTSEQSFTGFND 1381


>ref|YP_740555.1| RNA polymerase beta'' subunit [Platanus occidentalis]
            gi|122166045|sp|Q09G56.1|RPOC2_PLAOC RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|114054374|gb|ABI49768.1| RNA polymerase beta'' subunit
            [Platanus occidentalis]
          Length = 1387

 Score =  201 bits (512), Expect = 7e-50
 Identities = 98/112 (87%), Positives = 104/112 (92%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1275 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1334

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             +++NIPLEIKKKNLFEG MRD LFH REL DSC+PKNFHDTS+QSFTG  +
Sbjct: 1335 REHNNIPLEIKKKNLFEGEMRDTLFHHRELFDSCIPKNFHDTSKQSFTGFND 1386


>ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]
            gi|224474124|gb|ACN49313.1| RNA polymerase beta' subunit
            [Nelumbo lutea] gi|383286882|gb|AFH01531.1| RNA
            polymerase beta'' subunit (chloroplast) [Nelumbo lutea]
          Length = 1390

 Score =  200 bits (508), Expect = 2e-49
 Identities = 98/112 (87%), Positives = 103/112 (91%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1278 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1337

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             Q++NIPLEIKKKNLFEG MRDILFH +EL   C+PKNFHDTSEQSFTG  +
Sbjct: 1338 RQHNNIPLEIKKKNLFEGEMRDILFHHKELFHFCIPKNFHDTSEQSFTGFND 1389


>gb|AHE41663.1| RNA polymerase beta' subunit, partial (chloroplast) [Mytilaria
            laosensis]
          Length = 1374

 Score =  199 bits (507), Expect = 3e-49
 Identities = 99/112 (88%), Positives = 103/112 (91%)
 Frame = +2

Query: 2    RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCS 181
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVH S
Sbjct: 1262 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1321

Query: 182  NQYSNIPLEIKKKNLFEGNMRDILFHQRELLDSCVPKNFHDTSEQSFTGLTE 337
             QY+NIPLE KKKNLFEG MRDILFH REL +SC+ KNFHDTSEQSF GL +
Sbjct: 1322 RQYNNIPLETKKKNLFEGKMRDILFHHRELFNSCILKNFHDTSEQSFMGLND 1373