BLASTX nr result
ID: Cocculus23_contig00024409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024409
(589 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512193.1| zinc finger protein, putative [Ricinus commu... 67 3e-09
ref|XP_006574908.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 64 4e-08
gb|ACU13632.1| unknown [Glycine max] 64 4e-08
gb|AFK42291.1| unknown [Medicago truncatula] 62 9e-08
ref|XP_003613818.1| RING finger protein [Medicago truncatula] gi... 62 9e-08
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu... 62 1e-07
ref|XP_003613816.1| RING finger protein [Medicago truncatula] gi... 62 2e-07
gb|EXC19987.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 61 3e-07
ref|XP_006297993.1| hypothetical protein CARUB_v10014036mg, part... 60 3e-07
ref|XP_007199078.1| hypothetical protein PRUPE_ppa019107mg [Prun... 60 3e-07
ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyra... 60 3e-07
ref|NP_001147077.1| RING finger protein 126 [Zea mays] gi|195607... 60 3e-07
gb|EWM25547.1| e3 ubiquitin-protein ligase ring1 [Nannochloropsi... 60 4e-07
ref|XP_003602035.1| Ring finger protein [Medicago truncatula] gi... 60 4e-07
dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana] 59 8e-07
ref|XP_006406436.1| hypothetical protein EUTSA_v10021059mg [Eutr... 59 8e-07
ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein ... 59 8e-07
gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 59 1e-06
ref|XP_007157614.1| hypothetical protein PHAVU_002G084300g [Phas... 59 1e-06
gb|EPS64006.1| hypothetical protein M569_10777, partial [Genlise... 59 1e-06
>ref|XP_002512193.1| zinc finger protein, putative [Ricinus communis]
gi|223548737|gb|EEF50227.1| zinc finger protein,
putative [Ricinus communis]
Length = 190
Score = 67.4 bits (163), Expect = 3e-09
Identities = 28/60 (46%), Positives = 37/60 (61%)
Frame = -3
Query: 548 TEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRLL 369
T + EE VC +C+DEFV + +D+K C H FH C+ WL S H+ CP+CRF LL
Sbjct: 96 TASLLEGEEVVCAVCKDEFV--IDVDVKILPCNHFFHPDCILPWLNSDHNSCPLCRFHLL 153
>ref|XP_006574908.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 303
Score = 63.5 bits (153), Expect = 4e-08
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = -3
Query: 554 PATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFR 375
P+ E G+E+ CV+C +EF VG KE C HRFHG C+ KWL H CPVCR+
Sbjct: 178 PSVEIGEGNEDSECVVCLEEF--GVGGVAKEMPCKHRFHGNCIEKWL-GMHGSCPVCRYE 234
Query: 374 L 372
+
Sbjct: 235 M 235
>gb|ACU13632.1| unknown [Glycine max]
Length = 187
Score = 63.5 bits (153), Expect = 4e-08
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = -3
Query: 554 PATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFR 375
P+ E G+E+ CV+C +EF VG KE C HRFHG C+ KWL H CPVCR+
Sbjct: 106 PSVEIGEGNEDSECVVCLEEF--GVGGVAKEMPCKHRFHGNCIEKWL-GMHGSCPVCRYE 162
Query: 374 L 372
+
Sbjct: 163 M 163
>gb|AFK42291.1| unknown [Medicago truncatula]
Length = 202
Score = 62.4 bits (150), Expect = 9e-08
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 554 PATEEAIGSEEDV---------CVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSH 402
PAT+E+I + E + CV+C +EF VG +KE C HRFHG+C+ KWL H
Sbjct: 83 PATKESIEAMEKIEIEEGDGGECVVCLEEF--EVGGVVKEMPCKHRFHGKCIEKWL-GIH 139
Query: 401 DRCPVCRFRL 372
CPVCR+ +
Sbjct: 140 GSCPVCRYHM 149
>ref|XP_003613818.1| RING finger protein [Medicago truncatula]
gi|355515153|gb|AES96776.1| RING finger protein
[Medicago truncatula]
Length = 218
Score = 62.4 bits (150), Expect = 9e-08
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 554 PATEEAIGSEEDV---------CVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSH 402
PAT+E+I + E + CV+C +EF VG +KE C HRFHG+C+ KWL H
Sbjct: 83 PATKESIEAMEKIEIEEGDGGECVVCLEEF--EVGGVVKEMPCKHRFHGKCIEKWL-GIH 139
Query: 401 DRCPVCRFRL 372
CPVCR+ +
Sbjct: 140 GSCPVCRYHM 149
>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
gi|223538332|gb|EEF39939.1| zinc finger protein,
putative [Ricinus communis]
Length = 233
Score = 62.0 bits (149), Expect = 1e-07
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = -3
Query: 542 EAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
+ IG + C IC +E+ G +KE C HRFHG C+ KWL H CPVCR+++
Sbjct: 108 QEIGDRDSECAICLEEWEIGAGAVVKEMPCKHRFHGNCIEKWL-GIHGSCPVCRYKM 163
>ref|XP_003613816.1| RING finger protein [Medicago truncatula]
gi|355515151|gb|AES96774.1| RING finger protein
[Medicago truncatula]
Length = 222
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
Frame = -3
Query: 554 PATEEAIGSEEDV---------CVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSH 402
PAT+E+I + + + CV+C +EF VG +KE C HRFHG+C+ KWL H
Sbjct: 93 PATKESIEAMDKIEIEEGDGGECVVCLEEF--EVGGVVKEMPCKHRFHGKCIEKWL-GIH 149
Query: 401 DRCPVCRFRL 372
CPVCR+++
Sbjct: 150 GSCPVCRYQM 159
>gb|EXC19987.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 225
Score = 60.8 bits (146), Expect = 3e-07
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3
Query: 566 KAIKPATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPV 387
++IK IG + + CVIC +EF VG KE C HRFHG C+ KWL H CPV
Sbjct: 102 ESIKAMASVEIGEDGEECVICLEEF--EVGGFAKEMPCKHRFHGGCIEKWL-GIHGSCPV 158
Query: 386 CRFRL 372
CR ++
Sbjct: 159 CRHKM 163
>ref|XP_006297993.1| hypothetical protein CARUB_v10014036mg, partial [Capsella rubella]
gi|482566702|gb|EOA30891.1| hypothetical protein
CARUB_v10014036mg, partial [Capsella rubella]
Length = 361
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = -3
Query: 548 TEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
T++ + SE + C +C DEF + G D+K+ C H FH C+ WLQ H+ CPVCRF L
Sbjct: 233 TKDMLKSEMNQCAVCMDEFED--GSDVKQMPCKHVFHQDCLLPWLQ-LHNSCPVCRFEL 288
>ref|XP_007199078.1| hypothetical protein PRUPE_ppa019107mg [Prunus persica]
gi|462394478|gb|EMJ00277.1| hypothetical protein
PRUPE_ppa019107mg [Prunus persica]
Length = 256
Score = 60.5 bits (145), Expect = 3e-07
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = -3
Query: 527 EEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
E +VC IC ++FV D+ C H FHG C+ +WL+ SH CP+CRF++
Sbjct: 199 ESEVCPICLEKFVVG-SEDVASMPCSHVFHGNCIGRWLKGSHHSCPICRFKM 249
>ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329053|gb|EFH59472.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = -3
Query: 548 TEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
T++ + SE + C +C DEF + G D+K+ C H FH C+ WLQ H+ CPVCRF L
Sbjct: 207 TKDMLKSEMNQCAVCMDEFED--GSDVKQMPCKHVFHQDCLLPWLQ-LHNSCPVCRFEL 262
>ref|NP_001147077.1| RING finger protein 126 [Zea mays] gi|195607098|gb|ACG25379.1| RING
finger protein 126 [Zea mays]
Length = 308
Score = 60.5 bits (145), Expect = 3e-07
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Frame = -3
Query: 554 PATEEAIGSEEDV--------CVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHD 399
PAT+EA+ S E V C +C D+F +G++ KE C H+FH C+ WL+ H
Sbjct: 204 PATKEAVESLETVMVEESLVQCTVCLDDF--EIGVEAKEMPCKHKFHSECLLPWLE-LHS 260
Query: 398 RCPVCRFRL 372
CPVCR+ L
Sbjct: 261 SCPVCRYLL 269
>gb|EWM25547.1| e3 ubiquitin-protein ligase ring1 [Nannochloropsis gaditana]
Length = 112
Score = 60.1 bits (144), Expect = 4e-07
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = -3
Query: 560 IKPATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCR 381
++ T+ G+EE CV+CQ+E + G +K CGH FHG CV WL+ + CP+CR
Sbjct: 37 VREGTDRGGGAEERECVVCQEELGD--GKVLKRMPCGHVFHGECVETWLRRHANNCPICR 94
>ref|XP_003602035.1| Ring finger protein [Medicago truncatula]
gi|355491083|gb|AES72286.1| Ring finger protein
[Medicago truncatula]
Length = 239
Score = 60.1 bits (144), Expect = 4e-07
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Frame = -3
Query: 554 PATEEAIGSEEDV----------CVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSS 405
PAT+EAI S E V CVICQ EF N+G+++ + C H +H C+ +WL++S
Sbjct: 166 PATKEAIESLEKVKVEDCDTMKMCVICQVEF--NLGMEVTKMPCDHLYHHECIVQWLETS 223
Query: 404 HDRCPVCRFRL 372
H CP+CR L
Sbjct: 224 H-MCPMCRHPL 233
>dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
Length = 386
Score = 59.3 bits (142), Expect = 8e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -3
Query: 548 TEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
T++ + SE + C +C DEF + G D+K+ C H FH C+ WL+ H+ CPVCRF L
Sbjct: 263 TKDMLKSEMNQCAVCMDEFED--GSDVKQMPCKHVFHQDCLLPWLE-LHNSCPVCRFEL 318
>ref|XP_006406436.1| hypothetical protein EUTSA_v10021059mg [Eutrema salsugineum]
gi|557107582|gb|ESQ47889.1| hypothetical protein
EUTSA_v10021059mg [Eutrema salsugineum]
Length = 345
Score = 59.3 bits (142), Expect = 8e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -3
Query: 548 TEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
T++ + SE + C +C DEF + G D+K+ C H FH C+ WLQ H+ CPVCR+ L
Sbjct: 210 TKDMLKSEMNQCAVCMDEFED--GSDVKQMPCKHVFHQDCLLPWLQ-LHNSCPVCRYEL 265
>ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis
thaliana] gi|75301658|sp|Q8LPN7.1|RNG1L_ARATH RecName:
Full=E3 ubiquitin-protein ligase RING1-like; AltName:
Full=RING finger protein 1 gi|20465263|gb|AAM19951.1|
AT3g19950/MPN9_19 [Arabidopsis thaliana]
gi|23308365|gb|AAN18152.1| At3g19950/MPN9_19
[Arabidopsis thaliana] gi|332642790|gb|AEE76311.1| E3
ubiquitin-protein ligase RING1-like protein [Arabidopsis
thaliana]
Length = 328
Score = 59.3 bits (142), Expect = 8e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -3
Query: 548 TEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFRL 372
T++ + SE + C +C DEF + G D+K+ C H FH C+ WL+ H+ CPVCRF L
Sbjct: 205 TKDMLKSEMNQCAVCMDEFED--GSDVKQMPCKHVFHQDCLLPWLE-LHNSCPVCRFEL 260
>gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 378
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = -3
Query: 578 MERMKAIKPATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHD 399
ME + ++K TEE + S+ C +C+D F +G + K+ C H +H C+ WL+ H+
Sbjct: 199 MEGLPSVK-ITEELLASDSSQCAVCKDTF--ELGEEAKQMPCKHIYHSECILPWLE-LHN 254
Query: 398 RCPVCRFRL 372
CPVCR+ L
Sbjct: 255 SCPVCRYEL 263
>ref|XP_007157614.1| hypothetical protein PHAVU_002G084300g [Phaseolus vulgaris]
gi|561031029|gb|ESW29608.1| hypothetical protein
PHAVU_002G084300g [Phaseolus vulgaris]
Length = 222
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = -3
Query: 554 PATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHDRCPVCRFR 375
P+ E G E+ CV+C +EF VG KE C H+FHG C+ KWL H CPVCR+
Sbjct: 102 PSVEIREGCEDLECVVCLEEF--GVGGVAKEMPCKHKFHGDCIEKWL-GMHGSCPVCRYE 158
Query: 374 L 372
+
Sbjct: 159 M 159
>gb|EPS64006.1| hypothetical protein M569_10777, partial [Genlisea aurea]
Length = 162
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = -3
Query: 578 MERMKAIKPATEEAIGSEEDVCVICQDEFVENVGLDIKETECGHRFHGRCVFKWLQSSHD 399
++ +K ++ + E+ IG D CVIC +E+ +G KE C HRFH CV KWL+ H
Sbjct: 95 IDSLKTVEISGEDEIG---DPCVICLEEW--GIGDKAKEMPCSHRFHKECVEKWLR-IHG 148
Query: 398 RCPVCRFRL 372
CPVCR+ +
Sbjct: 149 SCPVCRYEM 157