BLASTX nr result
ID: Cocculus23_contig00024323
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024323
(261 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat... 68 2e-09
emb|CBI29414.3| unnamed protein product [Vitis vinifera] 68 2e-09
ref|XP_004306318.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group] gi|2080... 66 6e-09
ref|XP_007161642.1| hypothetical protein PHAVU_001G086300g [Phas... 65 8e-09
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ... 65 8e-09
ref|XP_006338733.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006338732.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006644243.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_006644241.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_006643626.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_006440836.1| hypothetical protein CICLE_v10018700mg [Citr... 64 2e-08
ref|XP_004967899.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c... 64 2e-08
ref|XP_004308731.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Grou... 64 2e-08
>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 67.8 bits (164), Expect = 2e-09
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NREIVVRD+KRFHHFKDGVCSCGD+W
Sbjct: 648 ISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
>emb|CBI29414.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 67.8 bits (164), Expect = 2e-09
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NREIVVRD+KRFHHFKDGVCSCGD+W
Sbjct: 320 ISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 350
>ref|XP_004306318.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 747
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+ NREIVVRD KRFHHFKDG+CSCGDFW
Sbjct: 717 ISKVMNREIVVRDSKRFHHFKDGLCSCGDFW 747
>dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa
Japonica Group]
Length = 1122
Score = 65.9 bits (159), Expect = 6e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW*LYAQYMQCEIFGEYATSAIA 105
ISKI NR+I+VRD +RFHHFKDGVCSCGD+W + MQ ++ + AT+ ++
Sbjct: 780 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW---ERSMQVQMQMQQATTVLS 828
>ref|XP_007161642.1| hypothetical protein PHAVU_001G086300g [Phaseolus vulgaris]
gi|561035106|gb|ESW33636.1| hypothetical protein
PHAVU_001G086300g [Phaseolus vulgaris]
Length = 669
Score = 65.5 bits (158), Expect = 8e-09
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+ NREIVVRD KRFHHFKDG+CSCGD+W
Sbjct: 639 ISKVVNREIVVRDSKRFHHFKDGMCSCGDYW 669
>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 672
Score = 65.5 bits (158), Expect = 8e-09
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NREIV+RD KRFHHFKDG+CSCGD+W
Sbjct: 642 ISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
>ref|XP_006338733.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 619
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NREIVVRD KRFHHFKDG CSCGD+W
Sbjct: 589 ISKIVNREIVVRDAKRFHHFKDGSCSCGDYW 619
>ref|XP_006338732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 645
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NREIVVRD KRFHHFKDG CSCGD+W
Sbjct: 615 ISKIVNREIVVRDAKRFHHFKDGSCSCGDYW 645
>ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 64.7 bits (156), Expect = 1e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+ +REI++RD KRFHHFKDGVCSCGDFW
Sbjct: 628 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
>ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 64.7 bits (156), Expect = 1e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+ +REI++RD KRFHHFKDGVCSCGDFW
Sbjct: 643 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK ANREI+VRD+ RFHHFKDGVCSCGD+W
Sbjct: 628 ISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
>ref|XP_006644243.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like isoform X3 [Oryza brachyantha]
Length = 514
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NR+I+VRD +RFHHFKDGVCSCGD+W
Sbjct: 484 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 514
>ref|XP_006644241.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like isoform X1 [Oryza brachyantha]
gi|573913107|ref|XP_006644242.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g01510-like isoform X2 [Oryza brachyantha]
Length = 543
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NR+I+VRD +RFHHFKDGVCSCGD+W
Sbjct: 513 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 543
>ref|XP_006643626.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Oryza brachyantha]
Length = 543
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NR+I+VRD +RFHHFKDGVCSCGD+W
Sbjct: 513 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 543
>ref|XP_006440836.1| hypothetical protein CICLE_v10018700mg [Citrus clementina]
gi|557543098|gb|ESR54076.1| hypothetical protein
CICLE_v10018700mg [Citrus clementina]
Length = 980
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+A REIVVRD KRFHHF+DGVCSCGD+W
Sbjct: 950 ISKVAEREIVVRDNKRFHHFRDGVCSCGDYW 980
>ref|XP_004967899.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Setaria italica]
Length = 615
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI +REI+VRD KRFHHFKDG+CSCGD+W
Sbjct: 585 ISKIVDREIIVRDSKRFHHFKDGICSCGDYW 615
>ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao]
gi|508712276|gb|EOY04173.1| Mitochondrial editing factor
22 [Theobroma cacao]
Length = 735
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+ NREIVVRD RFHHFKDGVCSCGD+W
Sbjct: 705 ISKLVNREIVVRDANRFHHFKDGVCSCGDYW 735
>ref|XP_004308731.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Fragaria vesca subsp. vesca]
Length = 675
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKIA REIVVRD RFHHFKDGVCSCGD+W
Sbjct: 645 ISKIAEREIVVRDTNRFHHFKDGVCSCGDYW 675
>ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Fragaria vesca subsp. vesca]
Length = 739
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISK+ NREIVVRD KRFHHFKDG CSCGD+W
Sbjct: 709 ISKLVNREIVVRDAKRFHHFKDGFCSCGDYW 739
>dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein
OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 260 ISKIANREIVVRDMKRFHHFKDGVCSCGDFW 168
ISKI NR+I+VRD +RFHHFKDGVCSCGD+W
Sbjct: 780 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810