BLASTX nr result
ID: Cocculus23_contig00024298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024298
(431 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007013068.1| Tetratricopeptide repeat-like superfamily pr... 103 2e-20
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 99 8e-19
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat... 99 8e-19
gb|EYU41633.1| hypothetical protein MIMGU_mgv1a000836mg [Mimulus... 98 1e-18
ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citr... 95 9e-18
ref|XP_002325018.2| hypothetical protein POPTR_0018s09280g [Popu... 95 1e-17
ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_007146518.1| hypothetical protein PHAVU_006G0477001g, par... 92 6e-17
ref|XP_006397508.1| hypothetical protein EUTSA_v10001296mg [Eutr... 92 1e-16
gb|EPS62296.1| hypothetical protein M569_12493 [Genlisea aurea] 92 1e-16
ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat... 92 1e-16
ref|XP_007204248.1| hypothetical protein PRUPE_ppa002250mg [Prun... 92 1e-16
ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat... 92 1e-16
ref|XP_006286993.1| hypothetical protein CARUB_v10000138mg [Caps... 91 1e-16
gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis] 91 2e-16
ref|XP_007146674.1| hypothetical protein PHAVU_006G0599000g [Pha... 91 2e-16
ref|NP_196557.1| mitochondrial editing factor 7 [Arabidopsis tha... 91 2e-16
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ... 91 2e-16
ref|XP_002873432.1| pentatricopeptide repeat-containing protein ... 91 2e-16
>ref|XP_007013068.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508783431|gb|EOY30687.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 697
Score = 103 bits (257), Expect = 2e-20
Identities = 44/62 (70%), Positives = 51/62 (82%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L +KP++ PIRI+KN+RVC DCH FMKFVSKI+GR IILRDSN FHHFV G CSC D
Sbjct: 636 FGLIKKPQATKPIRIMKNIRVCGDCHLFMKFVSKIIGRPIILRDSNRFHHFVGGSCSCKD 695
Query: 181 FW 186
+W
Sbjct: 696 YW 697
>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L +KP PIRI+KN+R+C DCH+FMKF S+I+GR IILRDSN FHHF G+CSCND
Sbjct: 634 FGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCND 693
Query: 181 FW 186
W
Sbjct: 694 NW 695
>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L +KP PIRI+KN+R+C DCH+FMKF S+I+GR IILRDSN FHHF G+CSCND
Sbjct: 634 FGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCND 693
Query: 181 FW 186
W
Sbjct: 694 NW 695
>gb|EYU41633.1| hypothetical protein MIMGU_mgv1a000836mg [Mimulus guttatus]
Length = 967
Score = 97.8 bits (242), Expect = 1e-18
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L R+ +S MPIRI+KN+RVC DCH K+VS+I+GR I+LRDSN FHHF G+CSCND
Sbjct: 906 FVLTRELESEMPIRIMKNLRVCVDCHSVFKYVSEIVGRRIVLRDSNRFHHFAGGKCSCND 965
Query: 181 FW 186
+W
Sbjct: 966 YW 967
>ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citrus clementina]
gi|568883054|ref|XP_006494315.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557554483|gb|ESR64497.1| hypothetical protein
CICLE_v10010361mg [Citrus clementina]
Length = 696
Score = 95.1 bits (235), Expect = 9e-18
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
+ L +KP PIRI+KN+RVC DCH FMKF S I+GR IILRDSN FHHFV G CSC D
Sbjct: 635 YCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKD 694
Query: 181 FW 186
W
Sbjct: 695 NW 696
>ref|XP_002325018.2| hypothetical protein POPTR_0018s09280g [Populus trichocarpa]
gi|550318380|gb|EEF03583.2| hypothetical protein
POPTR_0018s09280g [Populus trichocarpa]
Length = 695
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
+ L +KP PIRI+KN+R CADCH FMKFVS I R +ILRDSN FHHFV G+CSC D
Sbjct: 634 YGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKD 693
Query: 181 FW 186
+W
Sbjct: 694 YW 695
>ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
gi|571467711|ref|XP_006584018.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
gi|571467713|ref|XP_006584019.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X3 [Glycine max]
Length = 693
Score = 93.6 bits (231), Expect = 3e-17
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
FAL RKP PIRI+KN+RVC DCH FMKF S + R II+RDSN FHHF G+CSCND
Sbjct: 632 FALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCND 691
Query: 181 FW 186
W
Sbjct: 692 NW 693
>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L +KP PIRI+KN+RVC DCH FMKFVSKI+ R IILRD N FHHF+ G+CSC D
Sbjct: 634 FWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKD 693
Query: 181 FW 186
W
Sbjct: 694 SW 695
>ref|XP_007146518.1| hypothetical protein PHAVU_006G0477001g, partial [Phaseolus
vulgaris] gi|561019741|gb|ESW18512.1| hypothetical
protein PHAVU_006G0477001g, partial [Phaseolus vulgaris]
Length = 477
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
FAL RKP PIRI+KN+RVC DCH FMKF S +GR II+RDSN FHHF G+CSC D
Sbjct: 416 FALIRKPNGVEPIRIIKNIRVCDDCHVFMKFASITIGRPIIMRDSNRFHHFFDGKCSCKD 475
Query: 181 FW 186
W
Sbjct: 476 NW 477
>ref|XP_006397508.1| hypothetical protein EUTSA_v10001296mg [Eutrema salsugineum]
gi|557098581|gb|ESQ38961.1| hypothetical protein
EUTSA_v10001296mg [Eutrema salsugineum]
Length = 934
Score = 91.7 bits (226), Expect = 1e-16
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L + S +PIRI+KN+RVC DCH K++SKI GR IILRDSN FHHF G+CSC+D
Sbjct: 873 FVLIAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGECSCSD 932
Query: 181 FW 186
FW
Sbjct: 933 FW 934
>gb|EPS62296.1| hypothetical protein M569_12493 [Genlisea aurea]
Length = 1061
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIM-GRHIILRDSNLFHHFVAGQCSCN 177
F L K KS MPIRI+KN+RVC DCH K++S+I+ GR I+LRDSN FHHF G+CSCN
Sbjct: 999 FVLTLKKKSDMPIRIMKNLRVCVDCHTAFKYISEIVAGRQIVLRDSNRFHHFKDGECSCN 1058
Query: 178 DFW 186
D+W
Sbjct: 1059 DYW 1061
>ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cicer arietinum]
Length = 1030
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L RK S +PIRI+KN+RVC DCH K++SKI+ RHIILRDSN FHHF G CSC D
Sbjct: 971 FVLTRK--SELPIRIMKNLRVCGDCHTAFKYISKIVNRHIILRDSNRFHHFDGGMCSCGD 1028
Query: 181 FW 186
+W
Sbjct: 1029 YW 1030
>ref|XP_007204248.1| hypothetical protein PRUPE_ppa002250mg [Prunus persica]
gi|462399779|gb|EMJ05447.1| hypothetical protein
PRUPE_ppa002250mg [Prunus persica]
Length = 695
Score = 91.7 bits (226), Expect = 1e-16
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L +KP ++PIRI+KN+RVC DCH+FMK VS+ GR IILRDS FHHF+ G CSC +
Sbjct: 634 FGLTKKPHGSIPIRIIKNIRVCGDCHEFMKLVSQATGRLIILRDSKRFHHFIDGHCSCKN 693
Query: 181 FW 186
W
Sbjct: 694 CW 695
>ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum lycopersicum]
Length = 1086
Score = 91.7 bits (226), Expect = 1e-16
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L RK S MPIRI+KN+RVC DCH +++S+++GR I+LRDSN FHHF G+CSCND
Sbjct: 1027 FVLTRK--SDMPIRIMKNLRVCGDCHSAFRYISQVVGRQIVLRDSNRFHHFADGKCSCND 1084
Query: 181 FW 186
+W
Sbjct: 1085 YW 1086
>ref|XP_006286993.1| hypothetical protein CARUB_v10000138mg [Capsella rubella]
gi|482555699|gb|EOA19891.1| hypothetical protein
CARUB_v10000138mg [Capsella rubella]
Length = 991
Score = 91.3 bits (225), Expect = 1e-16
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L + S +PIRI+KN+RVC DCH K++SK+ GR IILRDSN FHHF G+CSC D
Sbjct: 930 FVLAAQRNSTLPIRIMKNLRVCGDCHSAFKYISKVEGRQIILRDSNRFHHFQDGECSCRD 989
Query: 181 FW 186
FW
Sbjct: 990 FW 991
>gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis]
Length = 1398
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L RK S +PIRI+KN+RVC DCH K++SKI+GR I+LRDS+ FHHF GQCSC D
Sbjct: 1012 FVLTRK--SELPIRIMKNLRVCGDCHSAFKYISKIVGRKIVLRDSHRFHHFEGGQCSCGD 1069
Query: 181 FW 186
+W
Sbjct: 1070 YW 1071
>ref|XP_007146674.1| hypothetical protein PHAVU_006G0599000g [Phaseolus vulgaris]
gi|561019897|gb|ESW18668.1| hypothetical protein
PHAVU_006G0599000g [Phaseolus vulgaris]
Length = 592
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/62 (64%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F+L RKP PIRI+KN+RVC DCH FMKF S +GR II+RDSN FHHF G+CSC D
Sbjct: 531 FSLIRKPNGIEPIRIIKNIRVCDDCHVFMKFASITIGRPIIMRDSNRFHHFFDGKCSCKD 590
Query: 181 FW 186
W
Sbjct: 591 NW 592
>ref|NP_196557.1| mitochondrial editing factor 7 [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At5g09950 gi|9758973|dbj|BAB09416.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| mitochondrial editing factor
7 [Arabidopsis thaliana]
Length = 995
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L + S +PIRI+KN+RVC DCH K++SKI GR IILRDSN FHHF G CSC+D
Sbjct: 934 FVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSD 993
Query: 181 FW 186
FW
Sbjct: 994 FW 995
>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L RK S +PIRI+KN+RVC DCH K++SKI+GR IILRDSN FHHF G CSC D
Sbjct: 1075 FVLTRK--SELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGD 1132
Query: 181 FW 186
+W
Sbjct: 1133 YW 1134
>ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319269|gb|EFH49691.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 970
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +1
Query: 1 FALNRKPKSAMPIRILKNVRVCADCHKFMKFVSKIMGRHIILRDSNLFHHFVAGQCSCND 180
F L + S +PIRI+KN+RVC DCH K +SKI GR IILRDSN FHHF G+CSC+D
Sbjct: 909 FVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSD 968
Query: 181 FW 186
FW
Sbjct: 969 FW 970