BLASTX nr result
ID: Cocculus23_contig00024118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024118
(237 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006597358.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
gb|EXB57865.1| hypothetical protein L484_001062 [Morus notabilis] 99 8e-19
ref|XP_007148381.1| hypothetical protein PHAVU_006G203700g [Phas... 99 8e-19
ref|NP_568214.1| pentatricopeptide repeat-containing protein [Ar... 95 1e-17
gb|AAM64472.1| unknown [Arabidopsis thaliana] 95 1e-17
emb|CAC05471.1| putative protein [Arabidopsis thaliana] 95 1e-17
gb|AFK33523.1| unknown [Lotus japonicus] 94 2e-17
ref|XP_004499170.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006287851.1| hypothetical protein CARUB_v10001077mg [Caps... 92 1e-16
ref|XP_006287850.1| hypothetical protein CARUB_v10001077mg [Caps... 92 1e-16
ref|XP_006420841.1| hypothetical protein CICLE_v10006919mg [Citr... 91 2e-16
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arab... 91 2e-16
emb|CBI40661.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_007042879.1| Tetratricopeptide repeat-like superfamily pr... 89 8e-16
ref|XP_006492603.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EYU18441.1| hypothetical protein MIMGU_mgv1a007532mg [Mimulus... 87 2e-15
ref|XP_002522615.1| pentatricopeptide repeat-containing protein,... 87 2e-15
>ref|XP_006597358.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like isoform X2 [Glycine max]
Length = 394
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/78 (60%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIK-EDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISEL 57
+ +R SS + +D +E+S++ +DDL+SRIFRLR PKRSAT LQKWV +G+ +T+S+L
Sbjct: 20 LNRTRFVSSGAVSSDLVEESVEGDDDLRSRIFRLRLPKRSATNVLQKWVLQGNPITLSQL 79
Query: 56 RDIAKELRKSQRYKHALE 3
RDI+KELR+SQRYKHALE
Sbjct: 80 RDISKELRRSQRYKHALE 97
>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like isoform X1 [Glycine max]
Length = 399
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/78 (60%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIK-EDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISEL 57
+ +R SS + +D +E+S++ +DDL+SRIFRLR PKRSAT LQKWV +G+ +T+S+L
Sbjct: 25 LNRTRFVSSGAVSSDLVEESVEGDDDLRSRIFRLRLPKRSATNVLQKWVLQGNPITLSQL 84
Query: 56 RDIAKELRKSQRYKHALE 3
RDI+KELR+SQRYKHALE
Sbjct: 85 RDISKELRRSQRYKHALE 102
>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIK--EDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISE 60
+ +R SS + +D +E+S++ +DDL+SRIFRLR PKRSAT LQKWV +G+ VT+S+
Sbjct: 20 LNRTRFVSSGAVSSDLVEESVEGVDDDLRSRIFRLRLPKRSATNVLQKWVLQGNPVTLSQ 79
Query: 59 LRDIAKELRKSQRYKHALE 3
LRDI+KELR+SQRYKHALE
Sbjct: 80 LRDISKELRRSQRYKHALE 98
>gb|EXB57865.1| hypothetical protein L484_001062 [Morus notabilis]
Length = 203
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/75 (64%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = -2
Query: 224 SRMFSSSVLENDQIE-DSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDI 48
SRMF S L + +E DS++ DD+KSRIFRLR PKRSAT LQ+W++EG++++ISELR I
Sbjct: 119 SRMFCSGTLRSYFVEEDSVESDDVKSRIFRLRLPKRSATNVLQRWISEGNQISISELRQI 178
Query: 47 AKELRKSQRYKHALE 3
+K+LRKS RYKHALE
Sbjct: 179 SKDLRKSHRYKHALE 193
>ref|XP_007148381.1| hypothetical protein PHAVU_006G203700g [Phaseolus vulgaris]
gi|561021604|gb|ESW20375.1| hypothetical protein
PHAVU_006G203700g [Phaseolus vulgaris]
Length = 393
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELR 54
+ +R SS V+ +D +E+S++ DDL+S I RLR PKRSAT LQKWV +G+ VT+S+LR
Sbjct: 20 LNRTRFASSGVVSSDLVEESVEGDDLRSIILRLRLPKRSATNILQKWVLQGNTVTLSQLR 79
Query: 53 DIAKELRKSQRYKHALE 3
DI+KELR+SQRYKHALE
Sbjct: 80 DISKELRRSQRYKHALE 96
>ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis
thaliana] gi|27311913|gb|AAO00922.1| putative protein
[Arabidopsis thaliana] gi|332004012|gb|AED91395.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 409
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/70 (60%), Positives = 60/70 (85%)
Frame = -2
Query: 212 SSSVLENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDIAKELR 33
+ + + N +E+S ++DDLKSRIFRLR PKRSAT L+KW+ EG+++TI+ELR+I+KELR
Sbjct: 39 ADAAIGNSLVEESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELR 98
Query: 32 KSQRYKHALE 3
+++RYKHALE
Sbjct: 99 RTRRYKHALE 108
>gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/70 (60%), Positives = 60/70 (85%)
Frame = -2
Query: 212 SSSVLENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDIAKELR 33
+ + + N +E+S ++DDLKSRIFRLR PKRSAT L+KW+ EG+++TI+ELR+I+KELR
Sbjct: 39 ADAAIGNSLVEESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELR 98
Query: 32 KSQRYKHALE 3
+++RYKHALE
Sbjct: 99 RTRRYKHALE 108
>emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/70 (60%), Positives = 60/70 (85%)
Frame = -2
Query: 212 SSSVLENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDIAKELR 33
+ + + N +E+S ++DDLKSRIFRLR PKRSAT L+KW+ EG+++TI+ELR+I+KELR
Sbjct: 39 ADAAIGNSLVEESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELR 98
Query: 32 KSQRYKHALE 3
+++RYKHALE
Sbjct: 99 RTRRYKHALE 108
>gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 94.4 bits (233), Expect = 2e-17
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELR 54
+ +R SS + D +E +DDL+SRI RLR PKRSAT L KWV EG+ VT+SELR
Sbjct: 30 LNRARFVSSGAVSTDFVES---DDDLRSRILRLRLPKRSATNILHKWVLEGNSVTVSELR 86
Query: 53 DIAKELRKSQRYKHALE 3
DIAKELR+SQRYKHALE
Sbjct: 87 DIAKELRRSQRYKHALE 103
>ref|XP_004499170.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cicer arietinum]
Length = 407
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIK----EDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTI 66
+ ASR SS + +D +E++ +DDL+SRI RLR PKRSAT LQKW+ +G+ + +
Sbjct: 30 LNASRFVSSGAVTSDYVEETPNSAEGDDDLRSRILRLRLPKRSATNVLQKWILQGNSIPV 89
Query: 65 SELRDIAKELRKSQRYKHALE 3
SELRDI+KELR SQRYKHALE
Sbjct: 90 SELRDISKELRSSQRYKHALE 110
>ref|XP_006287851.1| hypothetical protein CARUB_v10001077mg [Capsella rubella]
gi|482556557|gb|EOA20749.1| hypothetical protein
CARUB_v10001077mg [Capsella rubella]
Length = 412
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/63 (65%), Positives = 56/63 (88%)
Frame = -2
Query: 191 DQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDIAKELRKSQRYKH 12
D+ +S ++DDL+SRIFRLR PKRSAT L+KWV EG+++T++ELRDI+KELR+++RYKH
Sbjct: 50 DESLESEEKDDLRSRIFRLRLPKRSATTVLEKWVGEGNQITVNELRDISKELRRTRRYKH 109
Query: 11 ALE 3
ALE
Sbjct: 110 ALE 112
>ref|XP_006287850.1| hypothetical protein CARUB_v10001077mg [Capsella rubella]
gi|482556556|gb|EOA20748.1| hypothetical protein
CARUB_v10001077mg [Capsella rubella]
Length = 401
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/63 (65%), Positives = 56/63 (88%)
Frame = -2
Query: 191 DQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDIAKELRKSQRYKH 12
D+ +S ++DDL+SRIFRLR PKRSAT L+KWV EG+++T++ELRDI+KELR+++RYKH
Sbjct: 39 DESLESEEKDDLRSRIFRLRLPKRSATTVLEKWVGEGNQITVNELRDISKELRRTRRYKH 98
Query: 11 ALE 3
ALE
Sbjct: 99 ALE 101
>ref|XP_006420841.1| hypothetical protein CICLE_v10006919mg [Citrus clementina]
gi|557522714|gb|ESR34081.1| hypothetical protein
CICLE_v10006919mg [Citrus clementina]
Length = 377
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Frame = -2
Query: 233 IGASRMFSSSVLENDQIEDSIK----EDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTI 66
+G R SS +N+ +++ +DDLKSRIFR+ PKRSAT +Q+WV+EG++ T+
Sbjct: 8 LGLRRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATV 67
Query: 65 SELRDIAKELRKSQRYKHALE 3
SELR I KELRKSQRYKHALE
Sbjct: 68 SELRHILKELRKSQRYKHALE 88
>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Frame = -2
Query: 227 ASRMFSSSVLENDQIEDSI---KEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISEL 57
A R+ SS L ++ +E+S + DDLKSRIF+LR PKRS T LQ+W+ EG++V ISEL
Sbjct: 20 AFRLLSSRTLRSEVLEESPNSPENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISEL 79
Query: 56 RDIAKELRKSQRYKHALE 3
R+I+KELR++QRYKHALE
Sbjct: 80 RNISKELRRAQRYKHALE 97
>ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata] gi|297317210|gb|EFH47632.1| hypothetical protein
ARALYDRAFT_487758 [Arabidopsis lyrata subsp. lyrata]
Length = 410
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/77 (54%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = -2
Query: 230 GASRMFSS-SVLENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELR 54
G S+ +++ + + +E+S ++DDLKSRIFRLR PKRSAT L++WV EG+++TI+ELR
Sbjct: 33 GFSKSYNADAAIGGSLVEESEEKDDLKSRIFRLRLPKRSATTVLERWVGEGNQITINELR 92
Query: 53 DIAKELRKSQRYKHALE 3
+I+KELR+++R+KHALE
Sbjct: 93 EISKELRRTRRHKHALE 109
>emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Frame = -2
Query: 227 ASRMFSSSVLENDQIEDSI---KEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISEL 57
A R+ SS L ++ +E+S + DDLKSRIF+LR PKRS T LQ+W+ EG++V ISEL
Sbjct: 27 AFRLLSSRTLRSEVLEESPNSPENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISEL 86
Query: 56 RDIAKELRKSQRYKHALE 3
R+I+KELR++QRYKHALE
Sbjct: 87 RNISKELRRAQRYKHALE 104
>ref|XP_007042879.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508706814|gb|EOX98710.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 399
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Frame = -2
Query: 224 SRMFSSSVLENDQIED---SIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELR 54
SR+ SS + +++ +++ DDLKSRIF LR PKRSAT ++KWV E ++V+IS+LR
Sbjct: 20 SRLLSSGAASTEYVDEYLNNLETDDLKSRIFWLRLPKRSATTVIEKWVGEDNRVSISDLR 79
Query: 53 DIAKELRKSQRYKHALE 3
I+KELRKSQR+KHALE
Sbjct: 80 QISKELRKSQRFKHALE 96
>ref|XP_006492603.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Citrus sinensis]
Length = 408
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = -2
Query: 224 SRMFSSSVLENDQIEDSIK----EDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISEL 57
SR SS +N+ +++ +DDLKSRIFR+ PKRSA +Q+WV+EG++ T+SEL
Sbjct: 32 SRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSAINVIQRWVSEGNQATVSEL 91
Query: 56 RDIAKELRKSQRYKHALE 3
R I KELRKSQRYKHALE
Sbjct: 92 RHILKELRKSQRYKHALE 109
>gb|EYU18441.1| hypothetical protein MIMGU_mgv1a007532mg [Mimulus guttatus]
Length = 404
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = -2
Query: 200 LENDQIEDSIKEDDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISELRDIAKELRKSQR 21
+ +D ED + DDLKSRIFRLR PKRS + LQKWV EGH++T+S+LR I+K+LR+S R
Sbjct: 44 IADDFAED--ENDDLKSRIFRLRLPKRSVSNVLQKWVNEGHQITVSDLRSISKDLRRSHR 101
Query: 20 YKHALE 3
YKHALE
Sbjct: 102 YKHALE 107
>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 426
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Frame = -2
Query: 224 SRMFSSSVLENDQI--EDSIKE--DDLKSRIFRLRFPKRSATAALQKWVAEGHKVTISEL 57
+ SS L N+ + E S KE DDLKSRIFRLR PKRSAT + WV+EG+ VT SEL
Sbjct: 50 NHFLSSGTLRNEVLAEESSSKEIEDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASEL 109
Query: 56 RDIAKELRKSQRYKHALE 3
R+I+ ELRK QRYKHALE
Sbjct: 110 RNISNELRKLQRYKHALE 127