BLASTX nr result
ID: Cocculus23_contig00024080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024080
(301 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t... 87 2e-15
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 85 9e-15
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 85 9e-15
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 85 9e-15
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 84 3e-14
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 82 8e-14
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 82 1e-13
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 81 1e-13
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 80 2e-13
gb|EMS67609.1| Alanyl-tRNA synthetase [Triticum urartu] 80 4e-13
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 80 4e-13
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 79 7e-13
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 79 9e-13
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 79 9e-13
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A... 78 1e-12
ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, part... 78 1e-12
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript... 78 1e-12
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 78 1e-12
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 78 1e-12
ref|XP_007210994.1| hypothetical protein PRUPE_ppa021032mg [Prun... 77 2e-12
>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
Length = 405
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/93 (45%), Positives = 61/93 (65%)
Frame = +2
Query: 23 IEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSKSGLFF 202
I GV + +G P ++HLLFAD+ +FC+A+V+ Q + ILK YEAASGQ N SKS +FF
Sbjct: 52 IHGVKVCRGAPVVSHLLFADNCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFF 111
Query: 203 SPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
S N+S ++ ++G+ KYLG+PS+
Sbjct: 112 SRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSM 144
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = +2
Query: 8 EQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSK 187
E+ ++ G+ + +G P ++HLLFADD LI C+A+ Q +Q IL+ YE SGQ N K
Sbjct: 860 EEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDK 919
Query: 188 SGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
S + FSPN S +K A + + E +KYLG+P
Sbjct: 920 SAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLP 955
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = +2
Query: 8 EQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSK 187
E+ ++ G+ + +G P ++HLLFADD LI C+A+ Q +Q IL+ YE SGQ N K
Sbjct: 888 EEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDK 947
Query: 188 SGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
S + FSPN S +K A + + E +KYLG+P
Sbjct: 948 SAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLP 983
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = +2
Query: 8 EQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSK 187
E+ ++ G+ + +G P ++HLLFADD LI C+A+ Q +Q IL+ YE SGQ N K
Sbjct: 856 EEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDK 915
Query: 188 SGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
S + FSPN S +K A + + E +KYLG+P
Sbjct: 916 SAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLP 951
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/96 (40%), Positives = 58/96 (60%)
Frame = +2
Query: 8 EQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSK 187
E+ ++ G+ + +G P ++HLLFADD LI C+A+ Q +Q IL+ YE SGQ N K
Sbjct: 915 EEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDK 974
Query: 188 SGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
S + FSPN S +K A + + E ++YLG+P
Sbjct: 975 SAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLP 1010
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AEQ +IEG+ + +G P++ HL FADD LI +A + ++ IL YE ASGQ N
Sbjct: 239 AEQKGKIEGIKICRGAPKVNHLFFADDSLILMRARASDALELRRILDVYEKASGQVINKE 298
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
KS + FSPN D+ + + I E +KYLG+P
Sbjct: 299 KSSMMFSPNTGQHDRSLMRSNLSITDEASTEKYLGLP 335
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/99 (43%), Positives = 58/99 (58%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AEQ++ I G + + GP I+HL FADD +IFC+AS V IL+ YE ASGQ N
Sbjct: 997 AEQSQSITGFRVTRRGPSISHLFFADDAMIFCEASCAALSRVSDILQDYERASGQKVNTH 1056
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
KS + FSPN +K+ + +G + YLG+PSL
Sbjct: 1057 KSAMVFSPNTPDSEKEIWSRGLGFLVKSHHDIYLGLPSL 1095
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/99 (39%), Positives = 61/99 (61%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE+ +QI GV +A+G P ++HL +ADD L+FC A+V + ++ I YEAASGQ N
Sbjct: 946 AEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKD 1005
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
KS + FSP K+A ++ + ++YLG+P++
Sbjct: 1006 KSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTV 1044
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/97 (45%), Positives = 55/97 (56%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AEQ K I G+ +A P ++HLLFA+D L FCKA+ + ILK YEA SGQ NFS
Sbjct: 508 AEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMINFS 567
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
KS + F V K K +GIH+ YLG+P
Sbjct: 568 KSSIQFGHKVGDDIKAEIKSALGIHSIGGMGSYLGLP 604
>gb|EMS67609.1| Alanyl-tRNA synthetase [Triticum urartu]
Length = 1858
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/91 (43%), Positives = 55/91 (60%)
Frame = +2
Query: 26 EGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSKSGLFFS 205
+G+ ++ P I HLLFADD LIF +A V + Q + IL+ YE SGQ N KS ++FS
Sbjct: 1159 KGIRVSYRSPWINHLLFADDSLIFMQAKVDSAQRLNEILRIYERGSGQAVNKEKSSIYFS 1218
Query: 206 PNVSIQDKDAFKVLVGIHAEQFQKKYLGVPS 298
PN DK K + I E F ++YLG+P+
Sbjct: 1219 PNTLAPDKLLMKQTLNIAVEAFSERYLGLPT 1249
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/98 (41%), Positives = 57/98 (58%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE I GV++A G P I HL FADD IF +A V+ ++ IL+ YE A GQ +F
Sbjct: 618 AEMRGGIHGVSIATGAPSINHLFFADDSFIFLRAEVVEWYRLKHILQVYEEALGQQVHFQ 677
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPS 298
KS + FS NV+ + +D L+G+ KYLG+P+
Sbjct: 678 KSSISFSRNVAREAQDRLASLLGVERVDKHDKYLGLPT 715
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 79.0 bits (193), Expect = 7e-13
Identities = 42/97 (43%), Positives = 56/97 (57%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE NKQI G+ + K I+HLLFADD L FC+AS N + + I K YE ASGQ N++
Sbjct: 1020 AEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYA 1079
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
KS + F + + L+GI + KYLG+P
Sbjct: 1080 KSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLP 1116
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 78.6 bits (192), Expect = 9e-13
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE + I G + K P I+HLLFADD +F KA Q ++ IL+ YE++SGQ NF
Sbjct: 1082 AEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQ 1141
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
KS +F+S NV K + ++G+ KYLGVPS+
Sbjct: 1142 KSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSM 1180
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 78.6 bits (192), Expect = 9e-13
Identities = 39/99 (39%), Positives = 59/99 (59%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
A K+I G + +G P ++HL FADD ++F KASV V I+ YE ASGQ N S
Sbjct: 661 AASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVNLS 720
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
K+ + FS +V + + A ++G+ Q+KYLG+P++
Sbjct: 721 KTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTI 759
>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 950
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/97 (40%), Positives = 57/97 (58%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE+ +++G+++ P ITHLLFADD L+ KA+ N ++Q +L+ YEA SGQ N
Sbjct: 233 AEEAGRLQGISICANAPSITHLLFADDALLLLKANQENANYLQYVLQVYEACSGQMINKD 292
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
KS + FS N S D F +G+ +YLG+P
Sbjct: 293 KSSVLFSKNTSQTSGDQFLSTLGLAQGVRTDRYLGLP 329
>ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
gi|462403415|gb|EMJ08972.1| hypothetical protein
PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/99 (36%), Positives = 61/99 (61%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE+ + GV +A+G P +THLLFADD ++F KA+ + ++ + + YE +GQ N+S
Sbjct: 361 AERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETLFQTYEEVTGQQINYS 420
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
KS L SPN + D D + ++ + + + YLG+P++
Sbjct: 421 KSALSLSPNATRADFDMIEGVLNVPVVRCHENYLGLPTI 459
>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 400
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/97 (40%), Positives = 57/97 (58%)
Frame = +2
Query: 5 AEQNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFS 184
AE + +I+G+ +++ P +HLLFADD L FCKA + G+ + IL+ Y ASGQ N
Sbjct: 239 AEWHGRIQGLQISRASPSTSHLLFADDSLFFCKADPLQGKEIIDILRLYGEASGQQLNPD 298
Query: 185 KSGLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
KS + F V ++ KV +GIH + YLG+P
Sbjct: 299 KSSVMFGHEVDNSIRNTIKVSLGIHKDGGMGSYLGLP 335
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/97 (39%), Positives = 57/97 (58%)
Frame = +2
Query: 11 QNKQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSKS 190
Q+KQ+ G ++ GP I+HL FADD L+F +A+ + IL YE ASGQ N+ KS
Sbjct: 664 QDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKS 723
Query: 191 GLFFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
+ +S VS+ KD ++ + +KYLG+PS+
Sbjct: 724 EVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSI 760
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/93 (39%), Positives = 55/93 (59%)
Frame = +2
Query: 17 KQIEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSKSGL 196
KQ+ G ++ GP I+HLLFA D L+FCKA++ + +LK YE ASGQ NF KS +
Sbjct: 117 KQLHGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAI 176
Query: 197 FFSPNVSIQDKDAFKVLVGIHAEQFQKKYLGVP 295
F + + + L+GI+ + +YLG+P
Sbjct: 177 LFGKGLDFRTSEQLSQLLGIYKTEGFGRYLGLP 209
>ref|XP_007210994.1| hypothetical protein PRUPE_ppa021032mg [Prunus persica]
gi|462406729|gb|EMJ12193.1| hypothetical protein
PRUPE_ppa021032mg [Prunus persica]
Length = 781
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +2
Query: 23 IEGVTLAKGGPRITHLLFADDILIFCKASVMNGQHVQAILKAYEAASGQYANFSKSGLFF 202
++G+ + GP ++HLLFADD L F +A+ N ++++ +L Y ASGQ NF KS LFF
Sbjct: 436 LQGLKFGRSGPTLSHLLFADDALFFIRANTQNCRNMRLLLDGYCRASGQQINFGKSSLFF 495
Query: 203 SPNVSIQDKDAFKVLVGIHAEQFQKKYLGVPSL 301
SPN + ++G+ KYLG+P++
Sbjct: 496 SPNTPASIRTQLGAILGMTMVDDPGKYLGLPTM 528