BLASTX nr result
ID: Cocculus23_contig00023891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023891
(305 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006400457.1| hypothetical protein EUTSA_v10014423mg [Eutr... 118 7e-25
ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025... 117 2e-24
emb|CBI26176.3| unnamed protein product [Vitis vinifera] 117 2e-24
emb|CAN71157.1| hypothetical protein VITISV_036761 [Vitis vinifera] 117 2e-24
ref|XP_006288395.1| hypothetical protein CARUB_v10001648mg, part... 116 4e-24
ref|XP_002882453.1| hypothetical protein ARALYDRAFT_896728 [Arab... 116 4e-24
ref|NP_187269.1| ribosomal protein L34e superfamily protein [Ara... 115 5e-24
ref|NP_001190335.1| ribosomal protein L34e superfamily protein [... 115 5e-24
ref|XP_002312741.2| hypothetical protein POPTR_0008s20620g [Popu... 115 6e-24
ref|XP_006387008.1| hypothetical protein POPTR_2237s00200g, part... 115 6e-24
ref|XP_007225836.1| hypothetical protein PRUPE_ppa011602mg [Prun... 115 6e-24
ref|XP_004169520.1| PREDICTED: uncharacterized protein At5g19025... 115 8e-24
ref|XP_004169519.1| PREDICTED: uncharacterized protein At5g19025... 115 8e-24
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi... 115 8e-24
ref|XP_002516787.1| 60S ribosomal protein L34, putative [Ricinus... 115 8e-24
ref|XP_002314419.2| hypothetical protein POPTR_0010s03100g [Popu... 114 1e-23
ref|XP_007034588.1| Ribosomal protein L34e superfamily protein i... 112 5e-23
ref|XP_007034587.1| Ribosomal protein L34e superfamily protein i... 112 5e-23
ref|XP_002873924.1| pentatricopeptide repeat-containing protein ... 112 5e-23
ref|XP_004296952.1| PREDICTED: uncharacterized protein At5g19025... 110 2e-22
>ref|XP_006400457.1| hypothetical protein EUTSA_v10014423mg [Eutrema salsugineum]
gi|557101547|gb|ESQ41910.1| hypothetical protein
EUTSA_v10014423mg [Eutrema salsugineum]
Length = 261
Score = 118 bits (296), Expect = 7e-25
Identities = 53/71 (74%), Positives = 62/71 (87%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
++C G RSR+C NP CKGLKKAMEFD+QLQTE+C+K+ AKEID LPWKGG+E NPDYE
Sbjct: 145 DLCCG-SRSRKCRNPKCKGLKKAMEFDLQLQTEECIKSGSAKEIDRLPWKGGSESNPDYE 203
Query: 271 CLRSELRKMAP 303
CLR+ELRKMAP
Sbjct: 204 CLRAELRKMAP 214
>ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025 [Vitis vinifera]
Length = 216
Score = 117 bits (292), Expect = 2e-24
Identities = 56/72 (77%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E+C CG RSR+C NP CKGLKKAMEFD+QLQTE+CLK++ +KEID LPWKGG+E NPDY
Sbjct: 101 ELC--CGYRSRKCDNPGCKGLKKAMEFDLQLQTEECLKSS-SKEIDVLPWKGGSEANPDY 157
Query: 268 ECLRSELRKMAP 303
ECLRSELRKMAP
Sbjct: 158 ECLRSELRKMAP 169
>emb|CBI26176.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 117 bits (292), Expect = 2e-24
Identities = 56/72 (77%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E+C CG RSR+C NP CKGLKKAMEFD+QLQTE+CLK++ +KEID LPWKGG+E NPDY
Sbjct: 169 ELC--CGYRSRKCDNPGCKGLKKAMEFDLQLQTEECLKSS-SKEIDVLPWKGGSEANPDY 225
Query: 268 ECLRSELRKMAP 303
ECLRSELRKMAP
Sbjct: 226 ECLRSELRKMAP 237
>emb|CAN71157.1| hypothetical protein VITISV_036761 [Vitis vinifera]
Length = 371
Score = 117 bits (292), Expect = 2e-24
Identities = 56/72 (77%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E+C CG RSR+C NP CKGLKKAMEFD+QLQTE+CLK++ +KEID LPWKGG+E NPDY
Sbjct: 101 ELC--CGYRSRKCDNPGCKGLKKAMEFDLQLQTEECLKSS-SKEIDVLPWKGGSEANPDY 157
Query: 268 ECLRSELRKMAP 303
ECLRSELRKMAP
Sbjct: 158 ECLRSELRKMAP 169
>ref|XP_006288395.1| hypothetical protein CARUB_v10001648mg, partial [Capsella rubella]
gi|482557101|gb|EOA21293.1| hypothetical protein
CARUB_v10001648mg, partial [Capsella rubella]
Length = 283
Score = 116 bits (290), Expect = 4e-24
Identities = 52/71 (73%), Positives = 60/71 (84%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
++C G RSR+C NP CKGLKKAMEFD+QLQTE+C+K+ KEID LPWKGG+E NPDYE
Sbjct: 167 DLCCG-SRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPDYE 225
Query: 271 CLRSELRKMAP 303
CLR ELRKMAP
Sbjct: 226 CLRDELRKMAP 236
>ref|XP_002882453.1| hypothetical protein ARALYDRAFT_896728 [Arabidopsis lyrata subsp.
lyrata] gi|297328293|gb|EFH58712.1| hypothetical protein
ARALYDRAFT_896728 [Arabidopsis lyrata subsp. lyrata]
Length = 219
Score = 116 bits (290), Expect = 4e-24
Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
Frame = +1
Query: 106 CG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYECLRS 282
CG RSR+C NP CKGLKKAMEFD+QLQTE+C+K+ KEID LPWKGG+E NPDYECLR+
Sbjct: 106 CGPRSRKCKNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRA 165
Query: 283 ELRKMAP 303
ELR+MAP
Sbjct: 166 ELRRMAP 172
>ref|NP_187269.1| ribosomal protein L34e superfamily protein [Arabidopsis thaliana]
gi|6862922|gb|AAF30311.1|AC018907_11 unknown protein
[Arabidopsis thaliana] gi|62867643|gb|AAY17425.1|
At3g06180 [Arabidopsis thaliana]
gi|90962960|gb|ABE02404.1| At3g06180 [Arabidopsis
thaliana] gi|332640836|gb|AEE74357.1| ribosomal protein
L34e superfamily protein [Arabidopsis thaliana]
Length = 241
Score = 115 bits (289), Expect = 5e-24
Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
Frame = +1
Query: 106 CG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYECLRS 282
CG RSR+C NP CKGLKKAMEFD+QLQTE+C+K+ KEID LPWKGG+E NPDYECLR+
Sbjct: 128 CGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRA 187
Query: 283 ELRKMAP 303
ELR+MAP
Sbjct: 188 ELRRMAP 194
>ref|NP_001190335.1| ribosomal protein L34e superfamily protein [Arabidopsis thaliana]
gi|334302872|sp|P0C8Q9.3|Y5902_ARATH RecName:
Full=Uncharacterized protein At5g19025
gi|332005258|gb|AED92641.1| ribosomal protein L34e
superfamily protein [Arabidopsis thaliana]
Length = 259
Score = 115 bits (289), Expect = 5e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
++C G RSR+C NP CKG+KKAMEFD+QLQTE+C+K+ KEID LPWKGG+E NPDYE
Sbjct: 143 DLCCG-SRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPDYE 201
Query: 271 CLRSELRKMAP 303
CLR+ELRKMAP
Sbjct: 202 CLRAELRKMAP 212
>ref|XP_002312741.2| hypothetical protein POPTR_0008s20620g [Populus trichocarpa]
gi|550333550|gb|EEE90108.2| hypothetical protein
POPTR_0008s20620g [Populus trichocarpa]
Length = 227
Score = 115 bits (288), Expect = 6e-24
Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E C CG RSR+C P CKGLKKA+EFD+QLQTEDC K+T ++D+LPWKGGTE NPDY
Sbjct: 107 EFC--CGPRSRKCDKPGCKGLKKAIEFDLQLQTEDCAKSTAGDDVDKLPWKGGTESNPDY 164
Query: 268 ECLRSELRKMAP 303
ECLR+ELRKMAP
Sbjct: 165 ECLRAELRKMAP 176
>ref|XP_006387008.1| hypothetical protein POPTR_2237s00200g, partial [Populus
trichocarpa] gi|550304052|gb|ERP45922.1| hypothetical
protein POPTR_2237s00200g, partial [Populus trichocarpa]
Length = 218
Score = 115 bits (288), Expect = 6e-24
Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E C CG RSR+C P CKGLKKA+EFD+QLQTEDC K+T ++D+LPWKGGTE NPDY
Sbjct: 117 EFC--CGPRSRKCDKPGCKGLKKAIEFDLQLQTEDCAKSTAGDDVDKLPWKGGTESNPDY 174
Query: 268 ECLRSELRKMAP 303
ECLR+ELRKMAP
Sbjct: 175 ECLRAELRKMAP 186
>ref|XP_007225836.1| hypothetical protein PRUPE_ppa011602mg [Prunus persica]
gi|462422772|gb|EMJ27035.1| hypothetical protein
PRUPE_ppa011602mg [Prunus persica]
Length = 204
Score = 115 bits (288), Expect = 6e-24
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
E C G RSR+C P CKGLKKAMEFD+QLQTE+C+KT +K+ID+LPWKGG+EGNPDYE
Sbjct: 103 EFCCGT-RSRKCDRPGCKGLKKAMEFDLQLQTEECVKTG-SKDIDKLPWKGGSEGNPDYE 160
Query: 271 CLRSELRKMAP 303
CLRSELRKMAP
Sbjct: 161 CLRSELRKMAP 171
>ref|XP_004169520.1| PREDICTED: uncharacterized protein At5g19025-like isoform 3
[Cucumis sativus]
Length = 224
Score = 115 bits (287), Expect = 8e-24
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
EIC G RSR+C+ P CKGLKKAMEFD+QLQTE+C+K+ +KEID+LPWKGG+E NPDYE
Sbjct: 109 EICCGA-RSRKCAKPGCKGLKKAMEFDLQLQTEECVKSG-SKEIDKLPWKGGSEANPDYE 166
Query: 271 CLRSELRKMAP 303
CLRSELRKMAP
Sbjct: 167 CLRSELRKMAP 177
>ref|XP_004169519.1| PREDICTED: uncharacterized protein At5g19025-like isoform 2
[Cucumis sativus]
Length = 226
Score = 115 bits (287), Expect = 8e-24
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
EIC G RSR+C+ P CKGLKKAMEFD+QLQTE+C+K+ +KEID+LPWKGG+E NPDYE
Sbjct: 109 EICCGA-RSRKCAKPGCKGLKKAMEFDLQLQTEECVKSG-SKEIDKLPWKGGSEANPDYE 166
Query: 271 CLRSELRKMAP 303
CLRSELRKMAP
Sbjct: 167 CLRSELRKMAP 177
>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 115 bits (287), Expect = 8e-24
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
EIC G RSR+C+ P CKGLKKAMEFD+QLQTE+C+K+ +KEID+LPWKGG+E NPDYE
Sbjct: 109 EICCGA-RSRKCAKPGCKGLKKAMEFDLQLQTEECVKSG-SKEIDKLPWKGGSEANPDYE 166
Query: 271 CLRSELRKMAP 303
CLRSELRKMAP
Sbjct: 167 CLRSELRKMAP 177
>ref|XP_002516787.1| 60S ribosomal protein L34, putative [Ricinus communis]
gi|223543875|gb|EEF45401.1| 60S ribosomal protein L34,
putative [Ricinus communis]
Length = 238
Score = 115 bits (287), Expect = 8e-24
Identities = 56/74 (75%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLK--TTVAKEIDELPWKGGTEGNP 261
E C CG RSR+C CKGLKKAMEFD+QLQTEDC+K T VAK+ID+LPWKGG+EGNP
Sbjct: 120 EFC--CGPRSRKCDKAGCKGLKKAMEFDLQLQTEDCVKSATGVAKDIDKLPWKGGSEGNP 177
Query: 262 DYECLRSELRKMAP 303
DYECLR+ELRKMAP
Sbjct: 178 DYECLRAELRKMAP 191
>ref|XP_002314419.2| hypothetical protein POPTR_0010s03100g [Populus trichocarpa]
gi|118487882|gb|ABK95763.1| unknown [Populus
trichocarpa] gi|550328994|gb|EEF00590.2| hypothetical
protein POPTR_0010s03100g [Populus trichocarpa]
Length = 229
Score = 114 bits (286), Expect = 1e-23
Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E C CG RSR+C P CKG KKA+EFD+QLQTEDCLK+T A ++D+LPWKGGT NPDY
Sbjct: 114 EFC--CGPRSRKCHQPGCKGFKKAIEFDLQLQTEDCLKSTAANDVDKLPWKGGTVSNPDY 171
Query: 268 ECLRSELRKMAP 303
ECLR+ELRKMAP
Sbjct: 172 ECLRAELRKMAP 183
>ref|XP_007034588.1| Ribosomal protein L34e superfamily protein isoform 2 [Theobroma
cacao] gi|508713617|gb|EOY05514.1| Ribosomal protein
L34e superfamily protein isoform 2 [Theobroma cacao]
Length = 225
Score = 112 bits (280), Expect = 5e-23
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
E C G RSR+C P CKGLKKA+EFD+QLQTEDC+K +KEID LPWKGG+EGNPDYE
Sbjct: 120 EFCCG-SRSRKCEKPGCKGLKKALEFDLQLQTEDCVKNG-SKEIDCLPWKGGSEGNPDYE 177
Query: 271 CLRSELRKMAP 303
CLR+ELRKMAP
Sbjct: 178 CLRAELRKMAP 188
>ref|XP_007034587.1| Ribosomal protein L34e superfamily protein isoform 1 [Theobroma
cacao] gi|508713616|gb|EOY05513.1| Ribosomal protein
L34e superfamily protein isoform 1 [Theobroma cacao]
Length = 233
Score = 112 bits (280), Expect = 5e-23
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
E C G RSR+C P CKGLKKA+EFD+QLQTEDC+K +KEID LPWKGG+EGNPDYE
Sbjct: 120 EFCCG-SRSRKCEKPGCKGLKKALEFDLQLQTEDCVKNG-SKEIDCLPWKGGSEGNPDYE 177
Query: 271 CLRSELRKMAP 303
CLR+ELRKMAP
Sbjct: 178 CLRAELRKMAP 188
>ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319761|gb|EFH50183.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 939
Score = 112 bits (280), Expect = 5e-23
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = +1
Query: 91 EICGGCGRSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDYE 270
++C G RSR+C N CKG+KKAMEFD+QLQTE+C+K+ KEID LPWKGG+E NPDYE
Sbjct: 143 DLCCG-SRSRKCRNRKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPDYE 201
Query: 271 CLRSELRKMAP 303
CLR+ELRKMAP
Sbjct: 202 CLRAELRKMAP 212
>ref|XP_004296952.1| PREDICTED: uncharacterized protein At5g19025-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 223
Score = 110 bits (275), Expect = 2e-22
Identities = 54/72 (75%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Frame = +1
Query: 91 EICGGCG-RSRRCSNPNCKGLKKAMEFDIQLQTEDCLKTTVAKEIDELPWKGGTEGNPDY 267
E C CG RSR+C CKGLKKAMEFD+QLQTEDC+K+ +KEID+LPWKGG+E NPDY
Sbjct: 116 EFC--CGKRSRKCDRAGCKGLKKAMEFDLQLQTEDCVKSG-SKEIDKLPWKGGSETNPDY 172
Query: 268 ECLRSELRKMAP 303
ECLRSELRKMAP
Sbjct: 173 ECLRSELRKMAP 184