BLASTX nr result
ID: Cocculus23_contig00023878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023878
(269 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 66 4e-09
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 61 1e-07
ref|XP_003613200.1| Signal recognition particle receptor subunit... 61 2e-07
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 61 2e-07
gb|EXB91952.1| hypothetical protein L484_001826 [Morus notabilis] 59 5e-07
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g... 59 5e-07
ref|XP_003613498.1| Elongation factor 1-alpha [Medicago truncatu... 59 5e-07
emb|CCH50976.1| T4.15 [Malus x robusta] 59 7e-07
gb|EXC31206.1| DNA ligase 4 [Morus notabilis] 59 9e-07
ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ... 59 9e-07
ref|WP_008409321.1| hypothetical protein [Bacillus isronensis] g... 58 1e-06
ref|XP_003621261.1| Polypyrimidine tract-binding protein-like pr... 58 1e-06
ref|XP_003621260.1| Polypyrimidine tract-binding protein-like pr... 58 1e-06
ref|XP_003621259.1| Polypyrimidine tract-binding protein-like pr... 58 1e-06
ref|XP_003601268.1| Serine-protein kinase ATM [Medicago truncatu... 58 1e-06
ref|XP_003593597.1| Telomerase-binding protein EST1A [Medicago t... 57 2e-06
ref|XP_003611210.1| 60S ribosomal export protein NMD3 [Medicago ... 56 5e-06
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 56 5e-06
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis] 55 8e-06
emb|CBL94165.1| putative reverse transcriptase family member [Ma... 55 8e-06
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = -1
Query: 269 EQI*KIIGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTE 90
E I + +G AP +KM ENRLRWF HV RP+D+++R+ D + +RGR RPK T E
Sbjct: 286 EAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQMERRQTIRGRGRPKKTIRE 345
Query: 89 ALKKEMHALILD 54
+KK++ LD
Sbjct: 346 VIKKDLEINGLD 357
>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
Length = 1770
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP DK+RE RLRW+ HV RP++A +R + + I + RGR RP+IT TE ++K++
Sbjct: 1232 VGVAPIEDKVREGRLRWYGHVQRRPLEAPVRAWEDILIPNTRRGRGRPRITWTEVVRKDI 1291
>ref|XP_003613200.1| Signal recognition particle receptor subunit beta [Medicago
truncatula] gi|355514535|gb|AES96158.1| Signal
recognition particle receptor subunit beta [Medicago
truncatula]
Length = 336
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP +K+ ENRLRWF HV RP+DA++R+ D + + RGR RP+ T E ++K +
Sbjct: 77 VGVAPIVEKLIENRLRWFGHVERRPVDAVVRRVDQMEQSQVKRGRGRPRKTIRETIRKNL 136
Query: 71 HALILD 54
LD
Sbjct: 137 EVNELD 142
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = -1
Query: 269 EQI*KIIGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTE 90
E I + +G AP +KM E+RLRWF HV RPI+ L+R+ D + +GR RPK T E
Sbjct: 1310 EDIRERVGVAPIVEKMVESRLRWFGHVGRRPIEHLVRRVDEMEDGQKAKGRGRPKKTIHE 1369
Query: 89 ALKKEMH 69
+K+++H
Sbjct: 1370 VVKRDLH 1376
>gb|EXB91952.1| hypothetical protein L484_001826 [Morus notabilis]
Length = 783
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEAL 84
+G AP DK+RE RLRW+ HV RP++A +R + + I + +RGR RP+IT TE +
Sbjct: 25 VGVAPIEDKVREGRLRWYGHVQRRPLEAQVRAWEDILIPNTMRGRGRPRITWTEEI 80
>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
gi|405551390|gb|EKB47241.1| hypothetical protein
B879_04163 [Cecembia lonarensis LW9]
Length = 133
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G A KMRENRLRWF HV RP DA +R+ D T RGR RP+ T E L+K++
Sbjct: 47 VGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCDYGTEVRGRRGRGRPRKTLEETLRKDL 106
Query: 71 HALIL 57
L L
Sbjct: 107 EYLDL 111
>ref|XP_003613498.1| Elongation factor 1-alpha [Medicago truncatula]
gi|355514833|gb|AES96456.1| Elongation factor 1-alpha
[Medicago truncatula]
Length = 1488
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = -1
Query: 269 EQI*KIIGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTE 90
E I + G AP +K+ ENRLRWF HV RP+DA R+ D + + RGR RP+ T E
Sbjct: 613 ETIRERAGVAPIVEKLVENRLRWFGHVERRPVDAFARRVDQMEESQVKRGRGRPRKTIKE 672
Query: 89 ALKKEMHALILDS 51
++K++ LD+
Sbjct: 673 TIRKDLEVNDLDT 685
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G A KMREN+LRWF HV RP DA IR+ D T RGR RP+ T E L+K++
Sbjct: 900 VGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEVQGRRGRGRPRKTLEETLRKDL 959
Query: 71 HALIL 57
L L
Sbjct: 960 EYLDL 964
>gb|EXC31206.1| DNA ligase 4 [Morus notabilis]
Length = 821
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP DK+RE+RLRW+ HV RP++AL+R + + I + RGR RP+IT + K++
Sbjct: 13 VGVAPIEDKVREDRLRWYVHVQRRPLEALVRAWEDILIPNTRRGRGRPRITDEGIILKDL 72
>ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula]
gi|355477563|gb|AES58766.1| hypothetical protein
MTR_1g008050 [Medicago truncatula]
Length = 1675
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP +K+ ENRLRW HV RP+DA++R+ D + + RGR RPK T E ++K++
Sbjct: 1311 VGVAPIVEKLVENRLRWLGHVERRPVDAVVRRVDHMEESQVKRGRGRPKKTIRETIRKDL 1370
>ref|WP_008409321.1| hypothetical protein [Bacillus isronensis]
gi|405383715|gb|EKB43273.1| hypothetical protein
B857_03969 [Bacillus isronensis B3W22]
Length = 109
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G A KMRENRLRWF HV P DA IR+ D T RGR RP+ T E L+K++
Sbjct: 23 VGVAEIEGKMRENRLRWFGHVQRMPTDAPIRRCDYGTEVQGRRGRGRPRKTLEETLRKDL 82
Query: 71 HALIL 57
L L
Sbjct: 83 EYLDL 87
>ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula] gi|355496276|gb|AES77479.1| Polypyrimidine
tract-binding protein-like protein [Medicago truncatula]
Length = 592
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP +K+ ENRLRWF HV R +DA++R+ D + + RGRRRP+ T E ++ ++
Sbjct: 96 VGVAPIVEKLVENRLRWFGHVERRSVDAVVRRVDQMEESQVKRGRRRPRKTIRETIRNDL 155
Query: 71 HALILD 54
LD
Sbjct: 156 VVNELD 161
>ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula] gi|355496275|gb|AES77478.1| Polypyrimidine
tract-binding protein-like protein [Medicago truncatula]
Length = 618
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP +K+ ENRLRWF HV R +DA++R+ D + + RGRRRP+ T E ++ ++
Sbjct: 96 VGVAPIVEKLVENRLRWFGHVERRSVDAVVRRVDQMEESQVKRGRRRPRKTIRETIRNDL 155
Query: 71 HALILD 54
LD
Sbjct: 156 VVNELD 161
>ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula] gi|355496274|gb|AES77477.1| Polypyrimidine
tract-binding protein-like protein [Medicago truncatula]
Length = 780
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP +K+ ENRLRWF HV R +DA++R+ D + + RGRRRP+ T E ++ ++
Sbjct: 96 VGVAPIVEKLVENRLRWFGHVERRSVDAVVRRVDQMEESQVKRGRRRPRKTIRETIRNDL 155
Query: 71 HALILD 54
LD
Sbjct: 156 VVNELD 161
>ref|XP_003601268.1| Serine-protein kinase ATM [Medicago truncatula]
gi|355490316|gb|AES71519.1| Serine-protein kinase ATM
[Medicago truncatula]
Length = 1676
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP +K+ ENRL WF HV RP+DA++R+ + + + RGR RPK T E ++K++
Sbjct: 160 VGVAPIVEKLVENRLIWFGHVERRPVDAIVRRVNQMEESQVKRGRGRPKKTIRETIRKDL 219
Query: 71 HALILD 54
LD
Sbjct: 220 EVNELD 225
>ref|XP_003593597.1| Telomerase-binding protein EST1A [Medicago truncatula]
gi|355482645|gb|AES63848.1| Telomerase-binding protein
EST1A [Medicago truncatula]
Length = 1189
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G AP K+ ENRLRWF HV RP+D ++R+ D + RGR +P+ T E ++K++
Sbjct: 1115 VGVAPIVKKLVENRLRWFVHVERRPVDVVVRRVDQMEERQIKRGRGKPRKTIRETIRKDL 1174
Query: 71 HALILD 54
LD
Sbjct: 1175 EVNELD 1180
>ref|XP_003611210.1| 60S ribosomal export protein NMD3 [Medicago truncatula]
gi|355512545|gb|AES94168.1| 60S ribosomal export protein
NMD3 [Medicago truncatula]
Length = 669
Score = 56.2 bits (134), Expect = 5e-06
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = -1
Query: 242 APNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEMHAL 63
AP +K+ ENRLRWF HV RP+DA++R+ + + + RGR RPK T E + K++
Sbjct: 547 APIVEKLVENRLRWFGHVERRPVDAVVRRMNQMEESQVKRGRGRPKKTIRETIIKDLEVN 606
Query: 62 ILD 54
LD
Sbjct: 607 ELD 609
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 56.2 bits (134), Expect = 5e-06
Identities = 31/65 (47%), Positives = 38/65 (58%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G A KMREN LRWF HV RP DA IR+ D T +GR RP+ T E L+K++
Sbjct: 536 VGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRCDYGTKVQGRKGRGRPRKTLEETLRKDL 595
Query: 71 HALIL 57
L L
Sbjct: 596 EYLDL 600
>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
Length = 1413
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEAL 84
+G AP DK+RE RLRWF HV RP++A +R + + I + RGR R +IT TE L
Sbjct: 1013 VGVAPIEDKVREGRLRWFGHVQRRPLEAPVRAWEDILIPNTRRGRGRLRITWTEIL 1068
>emb|CBL94165.1| putative reverse transcriptase family member [Malus domestica]
Length = 163
Score = 55.5 bits (132), Expect = 8e-06
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -1
Query: 251 IGFAPNSDKMRENRLRWFEHVH*RPIDALIRKSDLLTINDNVRGRRRPKITRTEALKKEM 72
+G A KMRENRLRWF HV P DA +R+ + T RGR RP+ T E L+K++
Sbjct: 78 VGVAEVEGKMRENRLRWFGHVQRMPTDAPVRRCNYETEVRGRRGRGRPRKTLEETLRKDL 137
Query: 71 HALIL 57
L L
Sbjct: 138 EYLDL 142