BLASTX nr result
ID: Cocculus23_contig00023830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023830
(275 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261... 69 5e-11
emb|CAN71581.1| hypothetical protein VITISV_003231 [Vitis vinifera] 69 5e-11
emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera] 67 3e-10
ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260... 66 4e-10
ref|XP_007048984.1| Zinc ion binding,transcription regulators, p... 61 7e-09
ref|XP_002305222.2| hypothetical protein POPTR_0004s08310g [Popu... 61 3e-08
ref|XP_007214408.1| hypothetical protein PRUPE_ppa026349mg [Prun... 53 8e-07
ref|XP_002517218.1| conserved hypothetical protein [Ricinus comm... 57 2e-06
ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa ... 54 2e-06
gb|EYU20645.1| hypothetical protein MIMGU_mgv1a004678mg [Mimulus... 52 6e-06
>ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261683 [Vitis vinifera]
gi|297740496|emb|CBI30678.3| unnamed protein product
[Vitis vinifera]
Length = 530
Score = 68.9 bits (167), Expect(2) = 5e-11
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEVG 96
IYS+FL++ + + + ++G DH RK+ + D W GKS +SKKL EQIL+K+VG
Sbjct: 366 IYSRFLNEDSRVNPVGENGGDHSRKRRREYDPPAMNEWWNGKSNMSKKLLLEQILEKDVG 425
Query: 95 FSGLPPSFVAGELA 54
LPPSFV+G LA
Sbjct: 426 LDALPPSFVSGCLA 439
Score = 23.9 bits (50), Expect(2) = 5e-11
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 75 FCCGRVGA*KRREKIRAGKIRINYI 1
F G + +RREKI A K+RI+ I
Sbjct: 433 FVSGCLAYEQRREKINAAKLRISKI 457
>emb|CAN71581.1| hypothetical protein VITISV_003231 [Vitis vinifera]
Length = 503
Score = 68.9 bits (167), Expect(2) = 5e-11
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEVG 96
IYS+FL++ + + + ++G DH RK+ + D W GKS +SKKL EQIL+K+VG
Sbjct: 339 IYSRFLNEDSRVNPVGENGGDHSRKRRREYDPPAMNEWWNGKSNMSKKLLLEQILEKDVG 398
Query: 95 FSGLPPSFVAGELA 54
LPPSFV+G LA
Sbjct: 399 LDALPPSFVSGCLA 412
Score = 23.9 bits (50), Expect(2) = 5e-11
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 75 FCCGRVGA*KRREKIRAGKIRINYI 1
F G + +RREKI A K+RI+ I
Sbjct: 406 FVSGCLAYEQRREKINAAKLRISKI 430
>emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]
Length = 535
Score = 66.6 bits (161), Expect(2) = 3e-10
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSM-DDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEV 99
+Y KF+++ + + M DD G + RRK+ + D V KNW GKS SKKL +QIL+K+V
Sbjct: 369 MYXKFVNEGSRVNPMGDDGGDNRRRKRRREYDPPVIKNWWNGKSDKSKKLLLKQILEKDV 428
Query: 98 GFSGLPPSFVAGELA 54
G + LPPSFV+G LA
Sbjct: 429 GLNALPPSFVSGCLA 443
Score = 23.5 bits (49), Expect(2) = 3e-10
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 75 FCCGRVGA*KRREKIRAGKIRINYI 1
F G + +RREKI A K+RI +
Sbjct: 437 FVSGCLAYERRREKINAAKLRIKKV 461
>ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260157 [Vitis vinifera]
gi|297745306|emb|CBI40386.3| unnamed protein product
[Vitis vinifera]
Length = 535
Score = 66.2 bits (160), Expect(2) = 4e-10
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSM-DDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEV 99
+Y KF+++ + + M DD G + RRK+ + D V KNW GKS SKKL +QIL+K+V
Sbjct: 369 MYFKFVNEGSRVNPMGDDGGDNRRRKRRREYDPPVIKNWWNGKSDKSKKLLLKQILEKDV 428
Query: 98 GFSGLPPSFVAGELA 54
G + LPPSFV+G LA
Sbjct: 429 GLNALPPSFVSGCLA 443
Score = 23.5 bits (49), Expect(2) = 4e-10
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 75 FCCGRVGA*KRREKIRAGKIRINYI 1
F G + +RREKI A K+RI +
Sbjct: 437 FVSGCLAYERRREKINAAKLRIKKV 461
>ref|XP_007048984.1| Zinc ion binding,transcription regulators, putative [Theobroma
cacao] gi|508701245|gb|EOX93141.1| Zinc ion
binding,transcription regulators, putative [Theobroma
cacao]
Length = 525
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEVG 96
IY+ FL++ + SG H RK S+ L+L K+W +GKS LSKKL +QIL+KE+G
Sbjct: 362 IYTNFLNEVDDDRLEGQSGKVHGRK-SRGLELHACKDWWSGKSELSKKLLLKQILEKEIG 420
Query: 95 FSGLPPSFVAG 63
+PPSF+AG
Sbjct: 421 LDAMPPSFIAG 431
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 48 KRREKIRAGKIRINYI 1
+RR+KI A K+RIN I
Sbjct: 437 RRRKKINAAKVRINKI 452
>ref|XP_002305222.2| hypothetical protein POPTR_0004s08310g [Populus trichocarpa]
gi|550340593|gb|EEE85733.2| hypothetical protein
POPTR_0004s08310g [Populus trichocarpa]
Length = 529
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKSLSKKLFFEQILKKEVGF 93
+Y KFL D + M++SG RK+ + L++Q + W LSKKL +Q+L+K++GF
Sbjct: 367 VYDKFLMDGGCGRYMEESGKVLGRKRERELEIQATEWWNGKSELSKKLLLKQLLEKDIGF 426
Query: 92 SGLPPSFVAG 63
S +PPSFV G
Sbjct: 427 SVMPPSFVNG 436
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 48 KRREKIRAGKIRINYI 1
KRR KI A K+RI+ I
Sbjct: 442 KRRAKINAAKLRIDRI 457
>ref|XP_007214408.1| hypothetical protein PRUPE_ppa026349mg [Prunus persica]
gi|462410273|gb|EMJ15607.1| hypothetical protein
PRUPE_ppa026349mg [Prunus persica]
Length = 542
Score = 52.8 bits (125), Expect(2) = 8e-07
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEVG 96
+YSKFL + +KS RKK + +L W GKS LS++L ++IL+K+VG
Sbjct: 380 MYSKFLDEVGNVKSSGGLKEVRERKKRRGFELHACTEWWNGKSALSRRLLLKEILEKDVG 439
Query: 95 FSGLPPSFVAG 63
+PPSFV G
Sbjct: 440 LDVVPPSFVNG 450
Score = 25.8 bits (55), Expect(2) = 8e-07
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 75 FCCGRVGA*KRREKIRAGKIRINYI 1
F G V KRREKI A K+RI+ I
Sbjct: 447 FVNGCVTVKKRREKINAAKLRIDKI 471
>ref|XP_002517218.1| conserved hypothetical protein [Ricinus communis]
gi|223543589|gb|EEF45118.1| conserved hypothetical
protein [Ricinus communis]
Length = 532
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEVG 96
+Y+KFL++ + K ++ G +RRK + +L +W GKS LSKK+F +QIL+K+VG
Sbjct: 369 VYNKFLNEASCGKYKEEIGRAYRRKSKRAFELFAT-DWWNGKSELSKKIFLKQILEKDVG 427
Query: 95 FSGLPPSFVAG 63
+PPSFV G
Sbjct: 428 LDLMPPSFVNG 438
>ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa subunit-like [Glycine
max]
Length = 536
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQVDKNW*TGKS-LSKKLFFEQILKKEVG 96
+Y KFL + I+S+ SG +R+ + DL + W GKS LSKKL ++L+K+VG
Sbjct: 370 LYKKFLDENCCIESLRGSGNAQKRRVLR-FDLLECREWWDGKSELSKKLLLNRLLEKDVG 428
Query: 95 FSGLPPSFVAGEL 57
+PPSFV G+L
Sbjct: 429 VDTMPPSFVNGQL 441
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 75 FCCGRVGA*KRREKIRAGKIRINYI 1
F G++ RRE+I A K+RI I
Sbjct: 436 FVNGQLKCEMRRERINAAKVRIKRI 460
>gb|EYU20645.1| hypothetical protein MIMGU_mgv1a004678mg [Mimulus guttatus]
Length = 515
Score = 51.6 bits (122), Expect(2) = 6e-06
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = -1
Query: 272 IYSKFLSDTTFIKSMDDSGVDHRRKKSKTLDLQV-DKNW*TGKS-LSKKLFFEQILKKEV 99
IYS FL + + +K+ + ++R++ K D+++ +W GKS LSKKL +QIL+K+V
Sbjct: 357 IYSDFLDEISLVKANAEISTKNKRRR-KNFDIRLLCTDWWKGKSELSKKLVLKQILEKDV 415
Query: 98 GFSGLPPSFVAGELA 54
G PPSF G LA
Sbjct: 416 GLDAAPPSFEKGCLA 430
Score = 23.9 bits (50), Expect(2) = 6e-06
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 48 KRREKIRAGKIRINYI 1
KRREKI++ K+RI I
Sbjct: 433 KRREKIKSAKLRIQRI 448