BLASTX nr result
ID: Cocculus23_contig00023690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023690
(323 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_740615.1| NADH-plastoquinone oxidoreductase subunit 4 [Pl... 71 2e-10
gb|ACB29172.1| NADH dehydrogenase subunit D [Hyaloseris rubicunda] 69 5e-10
gb|ACB29150.1| NADH dehydrogenase subunit D [Dinoseris salicifolia] 69 5e-10
gb|AFB76997.1| NADH dehydrogenase subunit 4, partial (chloroplas... 69 7e-10
gb|AEX96446.1| NADH-plastoquinone oxidoreductase subunit 4, part... 69 7e-10
ref|YP_008993742.1| NADH-plastoquinone oxidoreductase subunit 4 ... 69 9e-10
ref|YP_008993484.1| NADH-plastoquinone oxidoreductase subunit 4 ... 69 9e-10
ref|YP_008993226.1| NADH-plastoquinone oxidoreductase subunit 4 ... 69 9e-10
gb|AFB76995.1| NADH dehydrogenase subunit 4, partial (chloroplas... 69 9e-10
gb|AEX96426.1| NADH-plastoquinone oxidoreductase subunit 4, part... 69 9e-10
ref|YP_001001584.2| NADH-plastoquinone oxidoreductase subunit 4 ... 69 9e-10
ref|YP_001004239.1| NADH-plastoquinone oxidoreductase subunit 4 ... 69 9e-10
ref|YP_009019841.1| NADH dehydrogenase subunit 4 (chloroplast) [... 68 1e-09
dbj|BAO01543.1| NADH dehydrogenase subunit 4, partial (chloropla... 68 1e-09
gb|AEX96417.1| NADH-plastoquinone oxidoreductase subunit 4, part... 68 1e-09
gb|ADD29824.1| NADH-plastoquinone oxidoreductase subunit 4 prote... 68 1e-09
ref|YP_740701.1| NADH-plastoquinone oxidoreductase subunit 4 [Na... 68 1e-09
ref|YP_567128.1| NADH dehydrogenase subunit 4 [Vitis vinifera] g... 68 1e-09
ref|YP_009000063.1| NADH-plastoquinone oxidoreductase subunit 4 ... 68 2e-09
ref|YP_006665830.1| NADH-plastoquinone oxidoreductase subunit 4 ... 68 2e-09
>ref|YP_740615.1| NADH-plastoquinone oxidoreductase subunit 4 [Platanus occidentalis]
gi|122165993|sp|Q09FZ6.1|NU4C_PLAOC RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|114054435|gb|ABI49829.1| NADH-plastoquinone
oxidoreductase subunit 4 [Platanus occidentalis]
Length = 500
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + KAIRWYT+ + + +L YVFCYHFQL+ PLI L +D++ IN FDFH +L I
Sbjct: 24 LPHRGNKAIRWYTICICLLE-LLLITYVFCYHFQLDDPLIQLEEDYKWINIFDFHWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>gb|ACB29172.1| NADH dehydrogenase subunit D [Hyaloseris rubicunda]
Length = 500
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + + IRWYT+ + M +L+ Y FCYHFQL+ PLI L +D++ IN FDFH KL I
Sbjct: 24 LPHKGNRVIRWYTICICMLELLLT-TYAFCYHFQLDDPLIQLVEDYKWINFFDFHWKLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>gb|ACB29150.1| NADH dehydrogenase subunit D [Dinoseris salicifolia]
Length = 500
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + + IRWYT+ + M +L+ Y FCYHFQL+ PLI L +D++ IN FDFH KL I
Sbjct: 24 LPHKGNRVIRWYTICICMLELLLT-TYAFCYHFQLDDPLIQLVEDYKWINFFDFHWKLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>gb|AFB76997.1| NADH dehydrogenase subunit 4, partial (chloroplast) [Pereskia
sacharosa]
Length = 498
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K IRWYT+ + M +L+ Y FCYHFQ + PLI LA+D++ IN FDFH +L I
Sbjct: 23 LPHRGNKVIRWYTICISMLELLLT-TYAFCYHFQPDDPLIQLAEDYKWINFFDFHWRLGI 81
Query: 43 DGLS 32
DGLS
Sbjct: 82 DGLS 85
>gb|AEX96446.1| NADH-plastoquinone oxidoreductase subunit 4, partial (chloroplast)
[Xanthorrhoea preissii]
Length = 500
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K RWYT+ + ++ +L+ YVFCYHFQL+ PLI L +D + IN FDFH KL I
Sbjct: 24 LPHRGNKIFRWYTICICLFELLLT-TYVFCYHFQLDDPLIQLEEDSKWINIFDFHWKLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>ref|YP_008993742.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Magnolia
salicifolia]
Length = 492
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = -2
Query: 205 KAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDIDGLS 32
K +RWYT+ + + +L+ AY FCYHFQL+ PLI L +D++ IN FDFH +L IDGLS
Sbjct: 22 KVVRWYTICICLLELLLT-AYAFCYHFQLDDPLIQLEEDYKWINIFDFHWRLGIDGLS 78
>ref|YP_008993484.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Magnolia
kobus]
Length = 492
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = -2
Query: 205 KAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDIDGLS 32
K +RWYT+ + + +L+ AY FCYHFQL+ PLI L +D++ IN FDFH +L IDGLS
Sbjct: 22 KVVRWYTICICLLELLLT-AYAFCYHFQLDDPLIQLEEDYKWINIFDFHWRLGIDGLS 78
>ref|YP_008993226.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Magnolia
cathcartii]
Length = 492
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = -2
Query: 205 KAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDIDGLS 32
K +RWYT+ + + +L YVFCYHFQL+ PLI L +D++ IN FDFH +L IDGLS
Sbjct: 22 KVVRWYTICICLLE-LLLMTYVFCYHFQLDDPLIQLEEDYKWINIFDFHWRLGIDGLS 78
>gb|AFB76995.1| NADH dehydrogenase subunit 4, partial (chloroplast) [Pereskiopsis
diguetii]
Length = 499
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K IRWYT+ + M +L Y FCYHFQ + PLI LA+D++ IN FDFH +L I
Sbjct: 24 LPHRGNKVIRWYTICISMLE-LLITTYAFCYHFQPDDPLIQLAEDYKWINFFDFHWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>gb|AEX96426.1| NADH-plastoquinone oxidoreductase subunit 4, partial (chloroplast)
[Ledebouria cordifolia]
Length = 500
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/64 (54%), Positives = 43/64 (67%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K RWYTL + + +L+ YVFCYHFQL+ PLI L +D + IN FDFH KL I
Sbjct: 24 LPHRGNKVFRWYTLCICLLELLLT-TYVFCYHFQLDDPLIQLEEDSKWINIFDFHWKLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>ref|YP_001001584.2| NADH-plastoquinone oxidoreductase subunit 4 [Nuphar advena]
gi|193806296|sp|A1XG05.2|NU4C_NUPAD RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|124069864|gb|ABC60509.2| NADH-plastoquinone
oxidoreductase subunit 4 [Nuphar advena]
Length = 500
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K +RWYT+ + ++ +L+ YVFCYHFQL+ PLI L +D IN FDFH +L I
Sbjct: 24 LPHRGNKVVRWYTICICLFELLLT-TYVFCYHFQLDDPLIQLEEDFNWINLFDFHWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>ref|YP_001004239.1| NADH-plastoquinone oxidoreductase subunit 4 [Ranunculus macranthus]
gi|193806233|sp|A1XGU1.1|NU4C_RANMC RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|85540857|gb|ABC70809.1| NADH-plastoquinone
oxidoreductase subunit 4 [Ranunculus macranthus]
Length = 502
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -2
Query: 205 KAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDIDGLS 32
K IRWYT+ + + +L AYVFCYHFQL+ PLI L QD++ I+ FDFH +L IDGLS
Sbjct: 30 KIIRWYTICICILE-LLITAYVFCYHFQLDDPLIQLEQDYKWIHFFDFHWRLGIDGLS 86
>ref|YP_009019841.1| NADH dehydrogenase subunit 4 (chloroplast) [Vitis rotundifolia]
gi|586947463|gb|AHJ91260.1| NADH dehydrogenase subunit 4
(chloroplast) [Vitis rotundifolia]
Length = 500
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K IRWYT+ + M +L+ YVFCYHFQL+ PLI L +D++ IN FDF +L I
Sbjct: 24 LPHRGNKVIRWYTIFICMLELLLT-TYVFCYHFQLDDPLIQLVEDYKWINFFDFDWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>dbj|BAO01543.1| NADH dehydrogenase subunit 4, partial (chloroplast) [Vitis vinifera
subsp. caucasica] gi|550533785|dbj|BAO01627.1| NADH
dehydrogenase subunit 4, partial (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533870|dbj|BAO01711.1|
NADH dehydrogenase subunit 4, partial (chloroplast)
[Vitis vinifera subsp. caucasica]
Length = 500
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K IRWYT+ + M +L+ YVFCYHFQL+ PLI L +D++ IN FDF +L I
Sbjct: 24 LPHRGNKVIRWYTIFICMLELLLT-TYVFCYHFQLDDPLIQLVEDYKWINFFDFDWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>gb|AEX96417.1| NADH-plastoquinone oxidoreductase subunit 4, partial (chloroplast)
[Hemiphylacus alatostylus]
Length = 500
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K RWYTL + ++ +L+ YVFCYHFQL+ PLI L +D + IN FDFH +L I
Sbjct: 24 LPHRGNKVFRWYTLCICLFELLLT-TYVFCYHFQLDDPLIQLEEDLKWINIFDFHWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>gb|ADD29824.1| NADH-plastoquinone oxidoreductase subunit 4 protein [Gunnera
manicata]
Length = 502
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L ++ K IRWYTL + + +L+ Y FCYHFQL+ PL+ L++D++ IN FDFH +L I
Sbjct: 26 LPQRGNKVIRWYTLCICILELLLT-TYAFCYHFQLDDPLMQLSEDYKWINFFDFHWRLGI 84
Query: 43 DGLS 32
DGLS
Sbjct: 85 DGLS 88
>ref|YP_740701.1| NADH-plastoquinone oxidoreductase subunit 4 [Nandina domestica]
gi|122165917|sp|Q09FR0.1|NU4C_NANDO RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|114054522|gb|ABI49915.1| NADH-plastoquinone
oxidoreductase subunit 4 [Nandina domestica]
Length = 500
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = -2
Query: 205 KAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDIDGLS 32
K IRWYT+ + + +L+ Y FCYHFQL+ PL+ L QD++ IN FDFH +L IDGLS
Sbjct: 30 KVIRWYTICICLLELLLT-TYAFCYHFQLDDPLVQLEQDYKWINIFDFHWRLGIDGLS 86
>ref|YP_567128.1| NADH dehydrogenase subunit 4 [Vitis vinifera]
gi|122236490|sp|Q0ZIW8.1|NU4C_VITVI RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|91701701|gb|ABE47585.1| NADH-plastoquinone
oxidoreductase subunit 4 [Vitis vinifera]
Length = 500
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K IRWYT+ + M +L+ YVFCYHFQL+ PLI L +D++ IN FDF +L I
Sbjct: 24 LPHRGNKVIRWYTIFICMLELLLT-TYVFCYHFQLDDPLIQLVEDYKWINFFDFDWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>ref|YP_009000063.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Silene
conoidea] gi|555944151|gb|AGZ18054.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Silene conoidea]
Length = 506
Score = 67.8 bits (164), Expect = 2e-09
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + KA RWYT+ + +L+ Y FCYHFQ + PLI LA+D++ IN FDFH KL I
Sbjct: 24 LPHRGNKATRWYTIGISTLELLLT-TYAFCYHFQPDDPLIQLAEDYKWINFFDFHWKLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86
>ref|YP_006665830.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Elodea
canadensis] gi|374094647|gb|AEY84703.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Elodea canadensis]
Length = 500
Score = 67.8 bits (164), Expect = 2e-09
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = -2
Query: 223 LSRQVTKAIRWYTLHMHMYH*ILSYAYVFCYHFQLNGPLILLAQDHR*INSFDFHLKLDI 44
L + K IRWYT+ + + +L+ YVFCYHFQL+ PL L +D++ IN FDFH +L I
Sbjct: 24 LPHRGNKVIRWYTIGICVLELLLT-TYVFCYHFQLDDPLTQLGEDYKWINLFDFHWRLGI 82
Query: 43 DGLS 32
DGLS
Sbjct: 83 DGLS 86