BLASTX nr result

ID: Cocculus23_contig00023523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00023523
         (554 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006377340.1| hypothetical protein POPTR_0011s05050g [Popu...    60   4e-07

>ref|XP_006377340.1| hypothetical protein POPTR_0011s05050g [Populus trichocarpa]
           gi|550327628|gb|ERP55137.1| hypothetical protein
           POPTR_0011s05050g [Populus trichocarpa]
          Length = 231

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/67 (44%), Positives = 36/67 (53%)
 Frame = +3

Query: 3   VATQGISILLSMILRALGXXXXXXXXXXXXXXXXXLPLLRGQGHVPPCVIGEPHFIPKSD 182
           +  QG SILL+M LRALG                 LPL+      PP V+GEP F  K+D
Sbjct: 148 ILVQGFSILLAMTLRALGPNNGSNYDIDEEYTSATLPLINPHSQTPPYVVGEPRFSIKND 207

Query: 183 SWNVRIH 203
           +WNVRIH
Sbjct: 208 AWNVRIH 214


Top