BLASTX nr result
ID: Cocculus23_contig00023107
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023107
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi... 139 3e-31
emb|CBI36131.3| unnamed protein product [Vitis vinifera] 139 3e-31
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi... 138 9e-31
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi... 137 1e-30
gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis] 136 3e-30
ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, part... 135 8e-30
ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat... 131 9e-29
ref|XP_007150636.1| hypothetical protein PHAVU_005G169000g [Phas... 131 1e-28
ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat... 130 1e-28
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi... 129 6e-28
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 125 5e-27
gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii] 125 8e-27
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare] 123 3e-26
ref|XP_006340008.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
ref|XP_004247284.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [S... 120 2e-25
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi... 120 3e-25
ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat... 119 3e-25
emb|CBI29414.3| unnamed protein product [Vitis vinifera] 119 3e-25
>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 139 bits (351), Expect = 3e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGTRLLITKNLR+C+DCHV IKFISKITEREIT+RDVNRYHHFKDG
Sbjct: 582 ERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGV 641
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 642 CSCGDYW 648
>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 139 bits (351), Expect = 3e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGTRLLITKNLR+C+DCHV IKFISKITEREIT+RDVNRYHHFKDG
Sbjct: 484 ERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGV 543
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 544 CSCGDYW 550
>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 606
Score = 138 bits (347), Expect = 9e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGT+LLITKNLRVC+DCHV IKFISK+TEREITIRDVNRYHHFKDG
Sbjct: 540 ERLAIAFGLISTPPGTKLLITKNLRVCEDCHVAIKFISKLTEREITIRDVNRYHHFKDGI 599
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 600 CSCGDYW 606
>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Solanum tuberosum]
Length = 602
Score = 137 bits (346), Expect = 1e-30
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGT+LLITKNLRVC+DCHV IKFISK+TEREIT+RDVNRYHHFKDG
Sbjct: 536 ERLAIAFGLISTPPGTKLLITKNLRVCEDCHVAIKFISKLTEREITVRDVNRYHHFKDGI 595
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 596 CSCGDYW 602
>gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]
Length = 651
Score = 136 bits (342), Expect = 3e-30
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLIST PGTRLLITKNLR+C+DCH+ IKFISKITEREITIRDVNRYHHFKDG
Sbjct: 585 ERLAIAFGLISTEPGTRLLITKNLRICEDCHIAIKFISKITEREITIRDVNRYHHFKDGL 644
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 645 CSCGDYW 651
>ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, partial [Citrus clementina]
gi|557528937|gb|ESR40187.1| hypothetical protein
CICLE_v10027522mg, partial [Citrus clementina]
Length = 488
Score = 135 bits (339), Expect = 8e-30
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLI+TP GTRLLITKNL++CDDCH+ IKFISKITEREIT+RDVNRYHHFKDG
Sbjct: 422 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 481
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 482 CSCGDYW 488
>ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Citrus sinensis]
Length = 644
Score = 134 bits (336), Expect = 2e-29
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLI+TP GT+LLITKNL++CDDCH+ IKFISKITEREIT+RDVNRYHHFKDG
Sbjct: 578 ERLAIAFGLINTPDGTKLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 637
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 638 CSCGDYW 644
>ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 640
Score = 131 bits (330), Expect = 9e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLIST PGTRLLITKNLR+C+DCHV IKFISKITEREIT+RDVNRYHHF+ G
Sbjct: 574 ERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGL 633
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 634 CSCGDYW 640
>ref|XP_007150636.1| hypothetical protein PHAVU_005G169000g [Phaseolus vulgaris]
gi|561023900|gb|ESW22630.1| hypothetical protein
PHAVU_005G169000g [Phaseolus vulgaris]
Length = 631
Score = 131 bits (329), Expect = 1e-28
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLIST PGTRLLITKNLR+C+DCHV IKFIS+ITEREIT+RDVNRYHHFK G
Sbjct: 565 ERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISEITEREITVRDVNRYHHFKHGL 624
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 625 CSCGDYW 631
>ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cicer arietinum]
Length = 615
Score = 130 bits (328), Expect = 1e-28
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLIST PGTRLLITKN+R+C+DCHV IKFISKITEREIT+RDVNRYHHFK G
Sbjct: 549 ERLAIAFGLISTSPGTRLLITKNIRICEDCHVAIKFISKITEREITVRDVNRYHHFKHGM 608
Query: 94 CSCGDYW 74
CSCGD+W
Sbjct: 609 CSCGDHW 615
>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 129 bits (323), Expect = 6e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLIST GT+LLI KNLR+C+DCHV IKFISKITEREITIRDVNRYHHFKDG
Sbjct: 508 ERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGV 567
Query: 94 CSCGDYW 74
CSCGD+W
Sbjct: 568 CSCGDFW 574
>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 125 bits (315), Expect = 5e-27
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLIST PGTRLLITKNLR+C+DCHV IKFISKI EREIT+RDVNRYH FK G
Sbjct: 554 ERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGM 613
Query: 94 CSCGDYW 74
CSCGD+W
Sbjct: 614 CSCGDHW 620
>gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]
Length = 637
Score = 125 bits (313), Expect = 8e-27
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGT+LL+TKNLRVC+DCHVVIK ISKI++REI IRDVNRYHHF +G
Sbjct: 571 ERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISKISQREIIIRDVNRYHHFVNGE 630
Query: 94 CSCGDYW 74
CSC DYW
Sbjct: 631 CSCKDYW 637
>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 123 bits (308), Expect = 3e-26
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGT+LL+TKNLRVC+DCHVVIK IS+I +REI IRDVNRYHHF +G
Sbjct: 571 ERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGE 630
Query: 94 CSCGDYW 74
CSC DYW
Sbjct: 631 CSCKDYW 637
>ref|XP_006340008.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Solanum tuberosum]
Length = 675
Score = 120 bits (302), Expect = 2e-25
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGL++T PGTRLLITKNLRVC DCH V KFIS I +REI +RDV R+HHFKDGT
Sbjct: 609 ERLAIAFGLLNTAPGTRLLITKNLRVCGDCHEVTKFISVIVKREIIVRDVKRFHHFKDGT 668
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 669 CSCGDYW 675
>ref|XP_004247284.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Solanum lycopersicum]
Length = 675
Score = 120 bits (302), Expect = 2e-25
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGL++T PGTRLLITKNLRVC DCH V KFIS I +REI +RDV R+HHFKDGT
Sbjct: 609 ERLAIAFGLLNTAPGTRLLITKNLRVCGDCHEVTKFISVIVKREIIVRDVKRFHHFKDGT 668
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 669 CSCGDYW 675
>ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein
SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 120 bits (302), Expect = 2e-25
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTPPGT+LL+TKNLRVC+DCHVVIK IS+I +REI IRDVNRYHHF +G
Sbjct: 574 ERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGE 633
Query: 94 CSCGDYW 74
CSC D+W
Sbjct: 634 CSCKDHW 640
>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 120 bits (300), Expect = 3e-25
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGLISTP GT+LL+TKNLRVC+DCHVVIK IS+I +REI IRDVNRYHHF +G
Sbjct: 571 ERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGE 630
Query: 94 CSCGDYW 74
CSC DYW
Sbjct: 631 CSCKDYW 637
>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 119 bits (299), Expect = 3e-25
Identities = 53/67 (79%), Positives = 57/67 (85%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGL++T PGTRLLITKNLRVC DCH KFISKI REI +RDV R+HHFKDG
Sbjct: 612 ERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGV 671
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 672 CSCGDYW 678
>emb|CBI29414.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 119 bits (299), Expect = 3e-25
Identities = 53/67 (79%), Positives = 57/67 (85%)
Frame = -3
Query: 274 ERLAIAFGLISTPPGTRLLITKNLRVCDDCHVVIKFISKITEREITIRDVNRYHHFKDGT 95
ERLAIAFGL++T PGTRLLITKNLRVC DCH KFISKI REI +RDV R+HHFKDG
Sbjct: 284 ERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGV 343
Query: 94 CSCGDYW 74
CSCGDYW
Sbjct: 344 CSCGDYW 350