BLASTX nr result

ID: Cocculus23_contig00023039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00023039
         (382 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283662.2| PREDICTED: WD repeat-containing protein 18 [...    76   4e-12
emb|CBI20112.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_006370071.1| hypothetical protein POPTR_0001s39280g [Popu...    65   1e-08
ref|XP_007021976.1| WD-repeat protein, putative [Theobroma cacao...    63   5e-08
gb|EXB54076.1| WD repeat-containing protein 18 [Morus notabilis]       61   1e-07
ref|XP_002532118.1| WD-repeat protein, putative [Ricinus communi...    61   1e-07
ref|XP_004295671.1| PREDICTED: WD repeat-containing protein 18-l...    55   8e-06

>ref|XP_002283662.2| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
          Length = 411

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 36/56 (64%), Positives = 47/56 (83%)
 Frame = -2

Query: 372 GFSSREISRPLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAKGG 205
           G ++RE+SRP++++ EM++ L V VKDR RAID LE+AIG Y+RLL LILKEAKGG
Sbjct: 343 GLAARELSRPVRKMEEMKEKLGVAVKDRSRAIDILESAIGAYERLLELILKEAKGG 398


>emb|CBI20112.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 36/56 (64%), Positives = 47/56 (83%)
 Frame = -2

Query: 372 GFSSREISRPLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAKGG 205
           G ++RE+SRP++++ EM++ L V VKDR RAID LE+AIG Y+RLL LILKEAKGG
Sbjct: 307 GLAARELSRPVRKMEEMKEKLGVAVKDRSRAIDILESAIGAYERLLELILKEAKGG 362


>ref|XP_006370071.1| hypothetical protein POPTR_0001s39280g [Populus trichocarpa]
           gi|550349250|gb|ERP66640.1| hypothetical protein
           POPTR_0001s39280g [Populus trichocarpa]
          Length = 412

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = -2

Query: 366 SSREISRPLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAKGG 205
           S +E +R +K+  E+E +L+V  KDR + ID LE+AIG Y+RLL LILKEAKGG
Sbjct: 347 SGKEFTRSVKDTVEIEDVLSVAAKDRSKTIDMLESAIGVYERLLELILKEAKGG 400


>ref|XP_007021976.1| WD-repeat protein, putative [Theobroma cacao]
           gi|508721604|gb|EOY13501.1| WD-repeat protein, putative
           [Theobroma cacao]
          Length = 406

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = -2

Query: 372 GFSSREISRPLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAKGG 205
           G +  E+SR LK+  ++E +L V  KDR RAID LE+AI  Y+RLL LILKEAK G
Sbjct: 339 GLNGVELSRSLKDTLDLEDVLKVAAKDRTRAIDMLESAISMYERLLELILKEAKRG 394


>gb|EXB54076.1| WD repeat-containing protein 18 [Morus notabilis]
          Length = 420

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = -2

Query: 372 GFSSREI---SRPLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAKG 208
           G S R++   S P+KE  EME +L +  KDR RAID LE+AI  Y+RLL LILKEAKG
Sbjct: 349 GLSGRQVMMSSSPVKERVEMEDVLALAEKDRSRAIDLLESAIAMYERLLELILKEAKG 406


>ref|XP_002532118.1| WD-repeat protein, putative [Ricinus communis]
           gi|223528198|gb|EEF30258.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 411

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = -2

Query: 381 QSFGFSSREIS-RPLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAKGG 205
           ++ G SS+E++ RP+K+   +E  L V  K+ ++AID LE+AIG Y+RLL LILKEAK G
Sbjct: 345 RNLGLSSKELNFRPIKDTVNVENALAVAAKNSRKAIDKLESAIGVYERLLELILKEAKAG 404


>ref|XP_004295671.1| PREDICTED: WD repeat-containing protein 18-like [Fragaria vesca
           subsp. vesca]
          Length = 413

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -2

Query: 345 PLKEVSEMEQMLNVVVKDRKRAIDTLEAAIGTYQRLLVLILKEAK 211
           P++++ EME +L V  +DR RAIDTLE+AI  Y++LL LIL EAK
Sbjct: 360 PVRQMIEMEDLLKVAAEDRSRAIDTLESAIAIYEKLLELILNEAK 404


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