BLASTX nr result
ID: Cocculus23_contig00022782
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00022782
(284 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325007.2| hypothetical protein POPTR_0018s09050g [Popu... 55 2e-09
ref|XP_007204677.1| hypothetical protein PRUPE_ppa000309mg [Prun... 49 9e-09
gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus... 53 2e-08
ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein lig... 50 2e-08
ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily prot... 55 3e-08
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera] 56 1e-07
ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein lig... 46 3e-07
ref|XP_007160321.1| hypothetical protein PHAVU_002G311800g [Phas... 50 1e-06
ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric... 45 1e-06
ref|XP_004299991.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ... 44 2e-06
>ref|XP_002325007.2| hypothetical protein POPTR_0018s09050g [Populus trichocarpa]
gi|550318363|gb|EEF03572.2| hypothetical protein
POPTR_0018s09050g [Populus trichocarpa]
Length = 266
Score = 54.7 bits (130), Expect(2) = 2e-09
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEILSDG 28
S++S D A ELKEL YEEV+DENC++F YFKE++++G
Sbjct: 184 SKMSGDQALELKELESIYEEVIDENCKVFAKYFKEVVTNG 223
Score = 32.7 bits (73), Expect(2) = 2e-09
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELF---LLPVLHWFIE 200
D AR++IA LFEELF LLPVL WF E
Sbjct: 118 DPSLARSQIAPVLFEELFLVHLLPVLRWFNE 148
>ref|XP_007204677.1| hypothetical protein PRUPE_ppa000309mg [Prunus persica]
gi|462400208|gb|EMJ05876.1| hypothetical protein
PRUPE_ppa000309mg [Prunus persica]
Length = 1300
Score = 48.5 bits (114), Expect(2) = 9e-09
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = -3
Query: 198 DLSIRKLIYSEAIGGSGSRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEILSDGKGS 19
D SI + S S++S +ELKEL YE+VLDENCR+F YFK++L + S
Sbjct: 167 DCSISDMSIVFPCSKSLSKMSGGQTSELKELESNYEKVLDENCRVFSNYFKQVLENKDAS 226
Score = 36.6 bits (83), Expect(2) = 9e-09
Identities = 20/31 (64%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELF---LLPVLHWFIE 200
D ARTE+A LFEELF LLPVLHW+ E
Sbjct: 118 DPSFARTELAPVLFEELFLVHLLPVLHWYNE 148
>gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus notabilis]
Length = 1365
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEIL----SDGKGSVR 13
S++S+ +ELKEL R YEEVLDENCR+ GY KE+L DG G R
Sbjct: 186 SKMSDAQMSELKELEREYEEVLDENCRVLAGYLKEVLENINQDGHGQNR 234
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELF---LLPVLHWFIE 200
D SAR++IA LFEELF LLPVL F E
Sbjct: 119 DPSSARSDIAPTLFEELFLVHLLPVLRCFNE 149
>ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
tuberosum]
Length = 1284
Score = 50.1 bits (118), Expect(2) = 2e-08
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEIL 37
S +S + A++LK+L YEE+LDENCR+F YFKE+L
Sbjct: 152 STISREQASQLKDLENEYEEILDENCRVFSRYFKEVL 188
Score = 34.3 bits (77), Expect(2) = 2e-08
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELFL---LPVLHWF 206
D F AR EIA +FE+LFL +P+LHW+
Sbjct: 102 DPFIARVEIAPLVFEQLFLIHFIPILHWY 130
>ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508783476|gb|EOY30732.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1332
Score = 55.5 bits (132), Expect(2) = 3e-08
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEILSD 31
S++S D A ELKEL R YEEVLDENCR+ V YFKE+L +
Sbjct: 186 SKMSGDQALELKELERNYEEVLDENCRVLVKYFKEVLEN 224
Score = 27.7 bits (60), Expect(2) = 3e-08
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELFL---LPVLHWFIE 200
D AR+E+A LFE+LFL LPVL F E
Sbjct: 120 DPSLARSELAPTLFEDLFLVHFLPVLQRFNE 150
>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
Length = 1618
Score = 56.2 bits (134), Expect(2) = 1e-07
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Frame = -3
Query: 207 SSKDL---SIRKLIYSEAIGGSGSRV----SEDPATELKELGRFYEEVLDENCRIFVGYF 49
SSK+L S ++ + E++ SG+R+ S +ELK L R YEEVLDENCR+ VGYF
Sbjct: 458 SSKNLGYDSDKRSRFEESVVVSGTRLLSKMSGGQTSELKXLERDYEEVLDENCRLLVGYF 517
Query: 48 KEILSDGKGS 19
+E+L + GS
Sbjct: 518 REVLGNENGS 527
Score = 25.0 bits (53), Expect(2) = 1e-07
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELF---LLPVLHWF 206
D AR+EIA +FEE F LLPVL F
Sbjct: 418 DPSLARSEIAPVVFEEFFLIHLLPVLQSF 446
>ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
lycopersicum]
Length = 1384
Score = 45.8 bits (107), Expect(2) = 3e-07
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEIL 37
S +S + A++LK+L YEE+LDENC++F YF ++L
Sbjct: 273 STMSREQASQLKDLENEYEEILDENCKVFATYFNDVL 309
Score = 34.3 bits (77), Expect(2) = 3e-07
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELFL---LPVLHWF 206
D F AR EIA +FE+LFL +P+LHW+
Sbjct: 226 DPFIARVEIAPLVFEQLFLIHFIPILHWY 254
>ref|XP_007160321.1| hypothetical protein PHAVU_002G311800g [Phaseolus vulgaris]
gi|561033736|gb|ESW32315.1| hypothetical protein
PHAVU_002G311800g [Phaseolus vulgaris]
Length = 1334
Score = 50.4 bits (119), Expect(2) = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEIL 37
S++SE+ A +L+E+ R YEEVLDENCR+ YFKE+L
Sbjct: 186 SKMSEEQAGKLREVEREYEEVLDENCRVLAEYFKEVL 222
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -2
Query: 271 ARTEIALNLFEELF---LLPVLHWFIE 200
AR+EIA L+E LF L PV WF E
Sbjct: 124 ARSEIAPVLYERLFSLHLFPVFRWFDE 150
>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223546727|gb|EEF48225.1| F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 1268
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEILSD 31
S++S A E +EL Y++VLDENCR++ YFKEIL +
Sbjct: 186 SKMSGGQALEFRELEGSYDDVLDENCRVYAQYFKEILKN 224
Score = 32.3 bits (72), Expect(2) = 1e-06
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -2
Query: 283 DSFSARTEIALNLFEELF---LLPVLHWFIE 200
D AR+EIA +F+ELF LLPVL WF E
Sbjct: 118 DPLLARSEIAPLIFQELFLVHLLPVLDWFNE 148
>ref|XP_004299991.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein
ligase LIN-like [Fragaria vesca subsp. vesca]
Length = 1266
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -3
Query: 147 SRVSEDPATELKELGRFYEEVLDENCRIFVGYFKEILSDGKG 22
S++S LKEL YE VLDENCR+F YF+E+L + G
Sbjct: 187 SKMSGVQTVGLKELESSYERVLDENCRVFSEYFREVLENKDG 228
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
Frame = -2
Query: 271 ARTEIALNLFEELF---LLPVLHWF 206
ARTE+A LFEELF LLPVL W+
Sbjct: 124 ARTEVAPVLFEELFLVHLLPVLQWY 148