BLASTX nr result
ID: Cocculus23_contig00022467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00022467
(1912 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy... 129 5e-27
gb|EYU31709.1| hypothetical protein MIMGU_mgv1a024293mg, partial... 123 3e-25
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo] 123 3e-25
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo] 123 3e-25
emb|CAE05585.1| OSJNBa0032N05.13 [Oryza sativa Japonica Group] 121 1e-24
gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Ja... 120 2e-24
ref|XP_004154396.1| PREDICTED: uncharacterized protein LOC101203... 120 2e-24
emb|CAD40071.1| OSJNBa0085C10.24 [Oryza sativa Japonica Group] 120 2e-24
gb|AAO39883.1| putative polyprotein [Oryza sativa Japonica Group... 120 3e-24
gb|ABA97877.1| retrotransposon protein, putative, unclassified [... 120 3e-24
emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa Japonica Group] 119 4e-24
ref|XP_004152998.1| PREDICTED: uncharacterized protein LOC101217... 119 5e-24
gb|ABA97876.1| retrotransposon protein, putative, unclassified [... 119 5e-24
gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group] 119 5e-24
gb|AAP52162.2| retrotransposon protein, putative, Ty3-gypsy subc... 119 5e-24
gb|AAM14672.1|AC097446_1 Putative polyprotein [Oryza sativa Japo... 119 5e-24
emb|CAH65749.1| OSIGBa0102B11.3 [Oryza sativa Indica Group] 119 6e-24
emb|CAH65889.1| OSIGBa0096I22.2 [Oryza sativa Indica Group] 119 6e-24
gb|AAO23103.1| putative gag-pol polyprotein [Oryza sativa Japoni... 118 8e-24
gb|ABF97995.1| retrotransposon protein, putative, Ty3-gypsy subc... 118 8e-24
>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
Group] gi|31431495|gb|AAP53268.1| retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1230
Score = 129 bits (324), Expect = 5e-27
Identities = 91/289 (31%), Positives = 133/289 (46%), Gaps = 6/289 (2%)
Frame = -2
Query: 1551 EAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMRGSAKKWWKTIL 1372
E K PPTF+G EAE+W++ +E + ++ ++ A + ++ SA +WW
Sbjct: 73 EFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHK 132
Query: 1371 RAKGQ--VNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYEHEFSILSQYAE 1198
++ + TW FKE F++KYFP S K +EFL LKQGN++VAEYE EFS L+++A
Sbjct: 133 KSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAP 192
Query: 1197 ELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRRSASSTLVQQNQ 1018
E V T+ K RF GLR L + + F E VS+A E ++
Sbjct: 193 EFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKG-----------YHE 241
Query: 1017 QRGSHNFYFXXXXXXXXXXXXGSDKKAKFESP--QAKVVGPQSIEPSTTIVPTQEATTP- 847
QR H KK K +P Q + G S + Q P
Sbjct: 242 QRIEHG---------------QPQKKFKTNNPQNQGRFRGNYSGQMQRKSSENQGRKCPI 286
Query: 846 CLASNIGLMTPMFLFNCHKCGQRGHKRSECPNAW-ASTTPSGTSQPVTR 703
C S++ + P C +CG+ GH R +CP S T+QP T+
Sbjct: 287 CQGSHVPSICPNCWGRCFECGEAGHTRYQCPLLQKGKNRVSSTTQPNTK 335
>gb|EYU31709.1| hypothetical protein MIMGU_mgv1a024293mg, partial [Mimulus guttatus]
Length = 674
Score = 123 bits (309), Expect = 3e-25
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Frame = -2
Query: 1557 MKEAMKYHPPTFNGGPKVQEAEDWLIDI-EDLATTLRFDEETQVALAVHQMRGSAKKWWK 1381
++E ++ PTF+G P AE+WL I +L T+ D +V+ AVHQ++G A WWK
Sbjct: 87 LREFLRLDTPTFHGEPDPLAAEEWLEQITRNLDTSRITDGGMRVSFAVHQLKGDAYHWWK 146
Query: 1380 TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYEHEFSILSQYA 1201
+ + + F +F ++YFP + D R++F++L QGN +VA YE +F+ L+++A
Sbjct: 147 RVKLTVA--DNFETFSRVFLDRYFPETTRDTFRQQFMDLIQGNMSVAHYEAKFTSLARFA 204
Query: 1200 EELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRRSASSTLVQQN 1021
ELV+TE+L+ RF RGL+ + E L ++T+++ V A E + + ++ +
Sbjct: 205 NELVSTEELRCKRFERGLKISIRERLAALRIRTYSDIVDTAATVEETLQ---DTRRIRDS 261
Query: 1020 QQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIEPSTTIVPTQEATTPCL 841
+ + N S A+ + +K V +SI P+ T ++TT
Sbjct: 262 RPQQGGNTIDSEGRFAKRQKSSNSVSHAQGKHQSSKSVHVESIAPT---AHTPQSTT--- 315
Query: 840 ASNIGLMTPMFLFNCHKCGQRGHKRSECP 754
C+ C Q GH+R +CP
Sbjct: 316 --------------CYHCHQPGHRRYDCP 330
>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
Length = 871
Score = 123 bits (309), Expect = 3e-25
Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 21/313 (6%)
Frame = -2
Query: 1590 VNDPAMRQAKLMKEAMKYHPPTFNGGPK-VQEAEDWLIDIEDLATTLRFDEETQVALAVH 1414
V D +AK +++ KY+P TF+G + A+ WL +E + ++ E+ +V AV
Sbjct: 321 VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF 380
Query: 1413 QMRGSAKKWWKTILRAKG----QVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRT 1246
+ WW+T R G Q+ TW +FKE F+ K+F AS D KR+EFLNL+QG+ T
Sbjct: 381 MLTDRGTAWWETTERMLGGDVSQI-TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMT 439
Query: 1245 VAEYEHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCE 1066
V +Y+ EF +LS++A E++ATE + +F+RGLR ++ + T A+ + A+D
Sbjct: 440 VEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLS 499
Query: 1065 SAKRRSASSTLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIEP 886
+R ++S T RGS S +K K E Q V ++ P
Sbjct: 500 LQERANSSKT-----AGRGS-----------------TSGQKRKAEQ-QPVPVPQRNFRP 536
Query: 885 STTIVPTQE-------------ATTPCLASNIGLMTPMFLF---NCHKCGQRGHKRSECP 754
Q+ T C ++G LF C KC Q GH CP
Sbjct: 537 GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLG----RCLFGTRTCFKCRQEGHTADRCP 592
Query: 753 NAWASTTPSGTSQ 715
P+G +Q
Sbjct: 593 -----LRPTGIAQ 600
>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
Length = 429
Score = 123 bits (308), Expect = 3e-25
Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Frame = -2
Query: 1590 VNDPAMRQAKLMKEAMKYHPPTFNGGPK-VQEAEDWLIDIEDLATTLRFDEETQVALAVH 1414
V D +AK +++ KY+P TF+G + A+ WL +E + ++ E+ +V AV
Sbjct: 49 VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF 108
Query: 1413 QMRGSAKKWWKTILRAKG----QVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRT 1246
+ WW+T R G Q+ TW +FKE F+ K+F AS D KR+EFLNL+QG+ T
Sbjct: 109 MLTDRGTAWWETTERMLGGDVSQI-TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMT 167
Query: 1245 VAEYEHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCE 1066
V +Y+ EF +LS++A E++ATE + +F+RGLR ++ + T A+ + A+D
Sbjct: 168 VEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLS 227
Query: 1065 SAKRRSASST 1036
+R ++S T
Sbjct: 228 LQERANSSKT 237
>emb|CAE05585.1| OSJNBa0032N05.13 [Oryza sativa Japonica Group]
Length = 371
Score = 121 bits (303), Expect = 1e-24
Identities = 92/292 (31%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Frame = -2
Query: 1584 DPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMR 1405
+P Q KL + ++ PPTF+ EA DWL +E L+ ++ +V A HQ++
Sbjct: 48 NPPPPQNKLA-DFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQKKVVFASHQLQ 106
Query: 1404 GSAKKWWKTIL--RAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYE 1231
GSA +WW I RA+GQ TW F E F + + PA + K+ EF LKQ + TVAEY
Sbjct: 107 GSASEWWDHIRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDHTVAEYL 166
Query: 1230 HEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRR 1051
HEF+ L++YA E V T++ + +F+ GL+ EL L + + F E V +A+ E K R
Sbjct: 167 HEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKNR 226
Query: 1050 SAS---STLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVG-------- 904
+ +V Q Q S S + +S Q + G
Sbjct: 227 MDNRKRGRIVFQEAQDSSQR------QRIKPLQIGESFSTGQGQSQQLNIGGEIKSETNE 280
Query: 903 --PQSIEPSTTIVPTQEATTPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP 754
+IE + VP Q+ + +N FNC+K GH ECP
Sbjct: 281 SNEVNIEQANQPVPVQQDQSQ--ENNSSGREQQVCFNCYK---PGHFARECP 327
>gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Japonica Group]
gi|31430529|gb|AAP52431.1| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group]
Length = 365
Score = 120 bits (302), Expect = 2e-24
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 10/287 (3%)
Frame = -2
Query: 1584 DPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMR 1405
+P Q KL + ++ PPTF+ EA DWL +E L+ ++ +V A HQ++
Sbjct: 48 NPPPPQNKLA-DFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQEKVVFASHQLQ 106
Query: 1404 GSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYE 1231
GSA +WW + RA+GQ TW F E F + + PA + K+ EF LKQ +RTV EY
Sbjct: 107 GSASEWWDHFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYL 166
Query: 1230 HEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRR 1051
HEF+ L++YA E V T++ + +F+ GL+ EL L + + F E V +A+ E K R
Sbjct: 167 HEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKNR 226
Query: 1050 SAS---STLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIEPST 880
+ +V Q Q S ++ +S Q + G + E +
Sbjct: 227 MDNRKRGRIVFQEAQDSSQR------QRIKPLQIGEPSSASQGQSQQLNIAGEINSETNA 280
Query: 879 TIVPTQEATTPCLA-----SNIGLMTPMFLFNCHKCGQRGHKRSECP 754
+ E T ++ S + C C + GH ECP
Sbjct: 281 SNKDNDEQATQSVSVQQDQSQVNNSNGREQRVCFNCYEPGHFVKECP 327
>ref|XP_004154396.1| PREDICTED: uncharacterized protein LOC101203289 [Cucumis sativus]
Length = 655
Score = 120 bits (301), Expect = 2e-24
Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 20/306 (6%)
Frame = -2
Query: 1569 QAKLMKEAMKYHPPTFNGGPK-VQEAEDWLIDIEDLATTLRFDEETQVALAVHQMRGSAK 1393
+AK +++ KY P TF+G + +AE WL +E + +R EE +V A +R
Sbjct: 116 EAKHLRDFRKYDPQTFDGSLEDPTKAEMWLSSVETIFNYMRCPEEHRVQCAAFLLRDRGI 175
Query: 1392 KWWKTILRAKG---QVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYEHEF 1222
WW+T +R G + TW +FK+ F+ K+F A+ D K +EFL LKQG+ TV EY+ EF
Sbjct: 176 IWWRTTMRMLGGDVRQITWDQFKDCFYTKFFSANLRDAKSQEFLELKQGHMTVEEYDQEF 235
Query: 1221 SILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRRSAS 1042
+LS++A ELV+ E+ + RF++GLR E+ + T AE + A+D K
Sbjct: 236 DMLSRFAPELVSNEQARADRFVKGLRDEIRGFVRALKPTTQAEALRLAVDMSIGK----- 290
Query: 1041 STLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQ-SIEPSTTIVPT 865
+Q S N S +K K E Q V PQ ++ P +
Sbjct: 291 -----DERQPRSFN------------KGSSSGQKRKVE--QRTVGVPQRNMRPGDSFRSF 331
Query: 864 QEAT-------------TPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP--NAWASTTP 730
Q+++ C ++G M C+KC Q GH CP + A ++
Sbjct: 332 QQSSGGAGDTTQERPVCNTCGKRHLGRCL-MGTRVCYKCKQEGHMADRCPLRSTGAGSSS 390
Query: 729 SGTSQP 712
G P
Sbjct: 391 QGERPP 396
>emb|CAD40071.1| OSJNBa0085C10.24 [Oryza sativa Japonica Group]
Length = 369
Score = 120 bits (301), Expect = 2e-24
Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Frame = -2
Query: 1584 DPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMR 1405
+P Q KL + ++ PPTF+ EA DWL +E+ L+ ++ +V A HQ++
Sbjct: 48 NPPPPQNKLA-DFLRVRPPTFSSTTNPVEAGDWLHAVEEKLELLQCTDQDKVVFASHQLQ 106
Query: 1404 GSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYE 1231
GSA +WW + RA+GQ TW F E F + + PA + K+ EF LKQ +RTV EY
Sbjct: 107 GSASEWWDHFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYL 166
Query: 1230 HEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRR 1051
HEF+ L++YA E V T++ + +F+ GL+ EL L + + F E V +A+ E K R
Sbjct: 167 HEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKNR 226
Query: 1050 SASSTLVQQNQQRG 1009
N++RG
Sbjct: 227 -------MDNRKRG 233
>gb|AAO39883.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711890|gb|ABF99685.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 371
Score = 120 bits (300), Expect = 3e-24
Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 15/293 (5%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N+ A + + ++ PPTF+ EA DWL IE L+ ++ +V A HQ+
Sbjct: 46 NNNAPPPQNKLADFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQL 105
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
+G A +WW + RA+GQ TWV F E F + + P + K+ EF LKQ + TVAEY
Sbjct: 106 QGPASEWWDHFRMNRAEGQPITWVEFTEAFKKTHIPVGVVSLKKREFRTLKQKDHTVAEY 165
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V T++ + +F+ GL+ EL L + F + V +A+ E K
Sbjct: 166 LHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKN 225
Query: 1053 RSAS---STLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVG------- 904
R + V Q Q S + S + +S Q + G
Sbjct: 226 RMDNRKRRMTVFQEAQGSSQRQHI------RPLQIGESSSAGQGQSQQLNIAGEIKSETN 279
Query: 903 ---PQSIEPSTTIVPTQEATTPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP 754
+IE + VP Q+ + +N FNC+K GH ECP
Sbjct: 280 ESNDVNIEQANQPVPVQQDQSQ--ENNTSGREQQVCFNCYK---PGHFARECP 327
>gb|ABA97877.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 310
Score = 120 bits (300), Expect = 3e-24
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N+ A + + ++ PPTF+ EA DWL IE L+ ++ +V A HQ+
Sbjct: 46 NNNAPPPQNKLTDFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQL 105
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
+GSA +WW + RA+GQ TW F E F E + PA + K+ EF LKQ + TVAEY
Sbjct: 106 QGSASEWWDHFRMNRAEGQTITWAEFTEAFKETHIPAGVVSLKKHEFRALKQKDHTVAEY 165
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V T++ + +F+ GL+ EL L + F + V +A+ E K
Sbjct: 166 LHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKN 225
Query: 1053 R 1051
R
Sbjct: 226 R 226
>emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa Japonica Group]
Length = 1664
Score = 119 bits (299), Expect = 4e-24
Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 9/323 (2%)
Frame = -2
Query: 1584 DPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMR 1405
DP + KL E ++ PP F+ EA DWL IE L+ ++ +V+ A HQ+
Sbjct: 573 DPPVVNNKLA-EFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLH 631
Query: 1404 GSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYE 1231
G A +WW + R + +W+ F F + + P+ + K++EF +L QG+RTV EY
Sbjct: 632 GPASEWWDHFRLNRTTPEPISWLEFNAAFRKTHIPSGVVSLKKKEFRSLTQGSRTVTEYL 691
Query: 1230 HEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRR 1051
HEF+ L++YA E V T++ + RF++GL EL L T F + V +A+ E R
Sbjct: 692 HEFNRLARYAPEEVRTDEERQERFLKGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNR 751
Query: 1050 SASSTLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIE---PST 880
++Q ++R +H ++ + P+ +GPQS+ P
Sbjct: 752 ------MEQKKRRIAH----------------FKAQQGNSQRPRL-TLGPQSMPQGAPRP 788
Query: 879 TIVPTQEATTPC-LASNIGLMTPMFLFNCHKCGQRGHKRSECP---NAWASTTPSGTSQP 712
PTQ+ S G+ C CG GH +CP + S P
Sbjct: 789 VASPTQQQPAKREQGSKPGV--------CFNCGDPGHYADKCPKPRRVKVVPAQNNPSAP 840
Query: 711 VTRERVQAIAELGMQAAENPIEG 643
+ RV +A Q A + I G
Sbjct: 841 AAKARVNHVAAAEAQGAPDVILG 863
>ref|XP_004152998.1| PREDICTED: uncharacterized protein LOC101217872 [Cucumis sativus]
Length = 461
Score = 119 bits (298), Expect = 5e-24
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 20/306 (6%)
Frame = -2
Query: 1569 QAKLMKEAMKYHPPTFNGGPK-VQEAEDWLIDIEDLATTLRFDEETQVALAVHQMRGSAK 1393
+AK +++ KY P TF+G + + E WL +E + +R EE +V A +R
Sbjct: 66 EAKHLRDFRKYDPQTFDGSLEDPTKVELWLSSVETIFNYMRCPEEHRVQCAAFLLRDRGI 125
Query: 1392 KWWKTILRAKG---QVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYEHEF 1222
WW+T +R G + TW +FK+ F+ K+F A+ D K +EFL LKQG+ TV EY+ +F
Sbjct: 126 IWWRTTMRMLGGDVRQITWDQFKDCFYTKFFSANLRDAKSQEFLELKQGHMTVEEYDQDF 185
Query: 1221 SILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRRSAS 1042
+LS++A ELV E+ + RF++GLR E+ + + T AE + AMD K
Sbjct: 186 DMLSRFAPELVGNEQARADRFVKGLRDEIRDFVRALKPTTQAEALRLAMDISIGK----- 240
Query: 1041 STLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQ-SIEPSTTIVPT 865
+ + +GS S +K K E Q V PQ ++ P +
Sbjct: 241 DEIRPMSFDKGS-----------------SSGQKRKVE--QRTVGVPQRNMRPGDSFRSF 281
Query: 864 QEAT-------------TPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP--NAWASTTP 730
Q+++ C ++G M C+KC Q GH CP + A ++
Sbjct: 282 QQSSGGAGDTTQERPVCDTCGKRHLGRCL-MGTRVCYKCKQEGHMADRCPLRSTGAGSSS 340
Query: 729 SGTSQP 712
G P
Sbjct: 341 QGERPP 346
>gb|ABA97876.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 310
Score = 119 bits (298), Expect = 5e-24
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N+ A + + ++ PPTF+ EA DWL IE L+ ++ +V A HQ+
Sbjct: 46 NNNAPPPQNKLTDFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQL 105
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
+GSA +WW + RA+GQ TW F E F E + PA + K+ EF LKQ + TVAEY
Sbjct: 106 QGSASEWWDHFRMNRAEGQPITWAEFTEAFKETHIPAGVVSLKKHEFRALKQKDHTVAEY 165
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V T++ + +F+ GL+ EL L + F + V +A+ E K
Sbjct: 166 LHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKN 225
Query: 1053 R 1051
R
Sbjct: 226 R 226
>gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1729
Score = 119 bits (298), Expect = 5e-24
Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 5/348 (1%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N+ A Q KL E ++ PP F+ EA DWL IE L+ ++ +V+ A HQ+
Sbjct: 440 NNHAPPQNKLA-EFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQL 498
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
G A +WW + R + TW+ F F + + P+ + K++EF +L QG+R+V EY
Sbjct: 499 HGPASEWWDHFRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEY 558
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V ++ + +F+ GL EL L T F + V +A+ E
Sbjct: 559 LHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYN 618
Query: 1053 RSASSTLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIEPSTTI 874
R ++Q ++R +H ++ + P+ +GPQS
Sbjct: 619 R------MEQKKRRIAH----------------FKAQQGSSQKPRL-TLGPQS------- 648
Query: 873 VPTQEATTPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP---NAWASTTPSGTSQPVTR 703
+P +T A PM FN CG GH +CP S ++ P ++
Sbjct: 649 MPQGASTQQQPAKREQGSKPMVCFN---CGDPGHYADKCPKPRRVKVVPAQSNSAVPASK 705
Query: 702 ERVQAIAELGMQAAENPIEGMINIVEKLSECAL*NC*STLLFISSSIA 559
RV +A Q A + I G +V + L + +T F+S S A
Sbjct: 706 ARVNHVAAAEAQDAPDVILGTF-LVNSVPATVLFDSGATHSFLSMSFA 752
>gb|AAP52162.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1730
Score = 119 bits (298), Expect = 5e-24
Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 5/348 (1%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N+ A Q KL E ++ PP F+ EA DWL IE L+ ++ +V+ A HQ+
Sbjct: 440 NNHAPPQNKLA-EFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQL 498
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
G A +WW + R + TW+ F F + + P+ + K++EF +L QG+R+V EY
Sbjct: 499 HGPASEWWDHFRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEY 558
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V ++ + +F+ GL EL L T F + V +A+ E
Sbjct: 559 LHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYN 618
Query: 1053 RSASSTLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIEPSTTI 874
R ++Q ++R +H ++ + P+ +GPQS
Sbjct: 619 R------MEQKKRRIAH----------------FKAQQGSSQKPRL-TLGPQS------- 648
Query: 873 VPTQEATTPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP---NAWASTTPSGTSQPVTR 703
+P +T A PM FN CG GH +CP S ++ P ++
Sbjct: 649 MPQGASTQQQPAKREQGSKPMVCFN---CGDPGHYADKCPKPRRVKVVPAQSNSAVPASK 705
Query: 702 ERVQAIAELGMQAAENPIEGMINIVEKLSECAL*NC*STLLFISSSIA 559
RV +A Q A + I G +V + L + +T F+S S A
Sbjct: 706 ARVNHVAAAEAQDAPDVILGTF-LVNSVPATVLFDSGATHSFLSMSFA 752
>gb|AAM14672.1|AC097446_1 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 119 bits (298), Expect = 5e-24
Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 5/348 (1%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N+ A Q KL E ++ PP F+ EA DWL IE L+ ++ +V+ A HQ+
Sbjct: 53 NNHAPPQNKLA-EFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQL 111
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
G A +WW + R + TW+ F F + + P+ + K++EF +L QG+R+V EY
Sbjct: 112 HGPASEWWDHFRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEY 171
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V ++ + +F+ GL EL L T F + V +A+ E
Sbjct: 172 LHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYN 231
Query: 1053 RSASSTLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQSIEPSTTI 874
R ++Q ++R +H ++ + P+ +GPQS
Sbjct: 232 R------MEQKKRRIAH----------------FKAQQGSSQKPRL-TLGPQS------- 261
Query: 873 VPTQEATTPCLASNIGLMTPMFLFNCHKCGQRGHKRSECP---NAWASTTPSGTSQPVTR 703
+P +T A PM FN CG GH +CP S ++ P ++
Sbjct: 262 MPQGASTQQQPAKREQGSKPMVCFN---CGDPGHYADKCPKPRRVKVVPAQSNSAVPASK 318
Query: 702 ERVQAIAELGMQAAENPIEGMINIVEKLSECAL*NC*STLLFISSSIA 559
RV +A Q A + I G +V + L + +T F+S S A
Sbjct: 319 ARVNHVAAAEAQDAPDVILGTF-LVNSVPATVLFDSGATHSFLSMSFA 365
>emb|CAH65749.1| OSIGBa0102B11.3 [Oryza sativa Indica Group]
Length = 368
Score = 119 bits (297), Expect = 6e-24
Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Frame = -2
Query: 1587 NDPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQM 1408
N P Q KL + ++ PPTF+ EA DWL +E L+ ++ +V A HQ+
Sbjct: 49 NPPPPPQNKLA-DFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQSTDQEKVVFASHQL 107
Query: 1407 RGSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEY 1234
+G A +WW + RA+GQ TW F E F + + PA + K+ EF LKQ +RTV EY
Sbjct: 108 QGPASEWWDHFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEY 167
Query: 1233 EHEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKR 1054
HEF+ L++YA E V T++ + +F+ GL+ EL L + + F E V +A+ E K
Sbjct: 168 LHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKN 227
Query: 1053 RSASSTLVQQNQQRG 1009
R N++RG
Sbjct: 228 R-------MDNRKRG 235
>emb|CAH65889.1| OSIGBa0096I22.2 [Oryza sativa Indica Group]
Length = 366
Score = 119 bits (297), Expect = 6e-24
Identities = 94/326 (28%), Positives = 142/326 (43%), Gaps = 15/326 (4%)
Frame = -2
Query: 1584 DPAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMR 1405
+P Q KL + ++ PPTF+ EA DWL +E L+ ++ +V HQ++
Sbjct: 48 NPLPPQNKLA-DFLRVKPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQEKVVFVSHQLQ 106
Query: 1404 GSAKKWWK--TILRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYE 1231
GSA +WW + RA+GQ TW F E F + + PA + K+ EF LKQ +RTV EY
Sbjct: 107 GSASEWWDHFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYL 166
Query: 1230 HEFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAMDCESAKRR 1051
HEF+ L++YA E V T++ + +F+ GL+ EL L + + F E V +A+ E K R
Sbjct: 167 HEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDFQELVDKAIRLEDKKNR 226
Query: 1050 SAS---STLVQQNQQRGSHNFYFXXXXXXXXXXXXGSDKKAKFESPQAKVVG-------- 904
+ +V Q Q S S + +S Q + G
Sbjct: 227 MDNHKRGRIVFQEAQDSSQR------QRIKPLQISESSSAGQGQSQQLNIGGGIKSETNG 280
Query: 903 --PQSIEPSTTIVPTQEATTPCLASNIGLMTPMFLFNCHKCGQRGHKRSECPNAWASTTP 730
+IE + VP Q+ + SN G + C C + GH ECP P
Sbjct: 281 SNEVNIEQANQPVPVQQDQSQVNNSN-GREQRV----CFNCYEPGHFVKECPKP-KRQQP 334
Query: 729 SGTSQPVTRERVQAIAELGMQAAENP 652
G + A+ + + P
Sbjct: 335 QGQVNNIVLTGANAVPVVSLSVTAQP 360
>gb|AAO23103.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1214
Score = 118 bits (296), Expect = 8e-24
Identities = 94/337 (27%), Positives = 140/337 (41%), Gaps = 17/337 (5%)
Frame = -2
Query: 1581 PAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMRG 1402
P Q + E ++ PPTF+ +A DWL + T+R + E +V A HQ++G
Sbjct: 75 PPPPQHSKLAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVRCNNEEKVIFAAHQLQG 134
Query: 1401 SAKKWWKTI--LRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYEH 1228
A WW + +GQ TW RF F + PA + KR EF LKQGNR+V EY H
Sbjct: 135 PASLWWDHFQATQPEGQPITWARFTAAFRRTHVPAGVMALKRREFRELKQGNRSVMEYLH 194
Query: 1227 EFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAM-------DC 1069
EF+ L++YA E V ++ K +F+ G+ PEL L + F V +++ +
Sbjct: 195 EFNNLARYAPEDVREDEEKQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKEL 254
Query: 1068 ESAKRRSASSTLVQQNQQRGSHNF-YFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQ-S 895
ES KRR A+ +NQQ + Y + PQ V PQ
Sbjct: 255 ESHKRRLANF----RNQQGANQRVRYTNPYPGGSSLQQQQQQQPRSAPRPQFVVCVPQPQ 310
Query: 894 IEPSTTIVPTQEATTPCLASNIGLMTPMFLFN-CHKCGQRGHKRSECP-----NAWASTT 733
+ S TP + G C C + GH +CP A
Sbjct: 311 QQQSQQGTRAPRPPTPAVQPGQGRRDVQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPR 370
Query: 732 PSGTSQPVTRERVQAIAELGMQAAENPIEGMINIVEK 622
P+ + V R RV + + + I G+++ +
Sbjct: 371 PNNGGKDVIRGRVNHVTAEDVLTTPDVIVGVVDCARR 407
>gb|ABF97995.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 118 bits (296), Expect = 8e-24
Identities = 94/337 (27%), Positives = 140/337 (41%), Gaps = 17/337 (5%)
Frame = -2
Query: 1581 PAMRQAKLMKEAMKYHPPTFNGGPKVQEAEDWLIDIEDLATTLRFDEETQVALAVHQMRG 1402
P Q + E ++ PPTF+ +A DWL + T+R + E +V A HQ++G
Sbjct: 75 PPPPQHSKLAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVRCNNEEKVIFAAHQLQG 134
Query: 1401 SAKKWWKTI--LRAKGQVNTWVRFKEIFFEKYFPASELDKKREEFLNLKQGNRTVAEYEH 1228
A WW + +GQ TW RF F + PA + KR EF LKQGNR+V EY H
Sbjct: 135 PASLWWDHFQATQPEGQPITWARFTAAFRRTHVPAGVMALKRREFRELKQGNRSVMEYLH 194
Query: 1227 EFSILSQYAEELVATEKLKLSRFIRGLRPELDEALTTAGVQTFAEGVSRAM-------DC 1069
EF+ L++YA E V ++ K +F+ G+ PEL L + F V +++ +
Sbjct: 195 EFNNLARYAPEDVREDEEKQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKEL 254
Query: 1068 ESAKRRSASSTLVQQNQQRGSHNF-YFXXXXXXXXXXXXGSDKKAKFESPQAKVVGPQ-S 895
ES KRR A+ +NQQ + Y + PQ V PQ
Sbjct: 255 ESHKRRLANF----RNQQGANQRVRYTNPYPGGSSLQQQQQQQPRSAPRPQFVVCVPQPQ 310
Query: 894 IEPSTTIVPTQEATTPCLASNIGLMTPMFLFN-CHKCGQRGHKRSECP-----NAWASTT 733
+ S TP + G C C + GH +CP A
Sbjct: 311 QQQSQQGTRAPRPPTPAVQPGQGRRDVQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPR 370
Query: 732 PSGTSQPVTRERVQAIAELGMQAAENPIEGMINIVEK 622
P+ + V R RV + + + I G+++ +
Sbjct: 371 PNNGGKDVIRGRVNHVTAEDVLTTPDVIVGVVDCARR 407