BLASTX nr result

ID: Cocculus23_contig00022463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00022463
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320428.2| hypothetical protein POPTR_0014s14220g [Popu...    56   5e-06
ref|XP_006844483.1| hypothetical protein AMTR_s00016p00109400 [A...    55   8e-06

>ref|XP_002320428.2| hypothetical protein POPTR_0014s14220g [Populus trichocarpa]
           gi|550324178|gb|EEE98743.2| hypothetical protein
           POPTR_0014s14220g [Populus trichocarpa]
          Length = 735

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = +3

Query: 189 RKNQMTNANHLLNFHYDSISRPQPRMPP 272
           R+ QMTNANHLLNFHYD ISRPQPR PP
Sbjct: 137 RRAQMTNANHLLNFHYDPISRPQPRAPP 164


>ref|XP_006844483.1| hypothetical protein AMTR_s00016p00109400 [Amborella trichopoda]
           gi|548846954|gb|ERN06158.1| hypothetical protein
           AMTR_s00016p00109400 [Amborella trichopoda]
          Length = 772

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = +3

Query: 189 RKNQMTNANHLLNFHYDSISRPQPRMPP 272
           RKNQ  NANHLLNFHYD ISRPQ RMPP
Sbjct: 152 RKNQTVNANHLLNFHYDPISRPQTRMPP 179


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