BLASTX nr result
ID: Cocculus23_contig00022186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00022186
(616 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354771.1| PREDICTED: pentatricopeptide repeat-containi... 76 7e-12
ref|XP_004242174.1| PREDICTED: pentatricopeptide repeat-containi... 76 9e-12
gb|EMT11842.1| hypothetical protein F775_08749 [Aegilops tauschii] 70 4e-10
ref|XP_007210813.1| hypothetical protein PRUPE_ppa016961mg, part... 69 1e-09
ref|XP_006661233.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 67 4e-09
tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea m... 65 2e-08
ref|XP_002514728.1| pentatricopeptide repeat-containing protein,... 65 2e-08
ref|XP_004971940.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_004500011.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat... 64 5e-08
emb|CBI19302.3| unnamed protein product [Vitis vinifera] 64 5e-08
ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containi... 64 5e-08
emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera] 64 5e-08
ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [A... 63 6e-08
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi... 63 6e-08
emb|CBI28459.3| unnamed protein product [Vitis vinifera] 63 6e-08
ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group] g... 63 8e-08
gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japo... 63 8e-08
gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indi... 63 8e-08
>ref|XP_006354771.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Solanum tuberosum]
Length = 675
Score = 76.3 bits (186), Expect = 7e-12
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = -3
Query: 530 FPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMT 351
FPN VTY L+ GLCKDGQ F+A KFF +R G+ PD TYA+++QR+ + +H M
Sbjct: 552 FPNNVTYSALIHGLCKDGQYFKANKFFMDLRRNGLYPDLSTYAMMIQRHFEARHITRVMM 611
Query: 350 FLADMLK 330
ADMLK
Sbjct: 612 LKADMLK 618
>ref|XP_004242174.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Solanum lycopersicum]
Length = 691
Score = 75.9 bits (185), Expect = 9e-12
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = -3
Query: 530 FPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMT 351
FPN VTY L+ GLCKDGQ F+A KFF +R G+ PD TYA+++QR+ + +H M
Sbjct: 552 FPNNVTYSALIHGLCKDGQYFKANKFFVDLRRNGLYPDLSTYAMMIQRHFEARHITHVMM 611
Query: 350 FLADMLK 330
ADMLK
Sbjct: 612 LKADMLK 618
>gb|EMT11842.1| hypothetical protein F775_08749 [Aegilops tauschii]
Length = 513
Score = 70.5 bits (171), Expect = 4e-10
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = -3
Query: 560 SNQVMNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYC 381
SN PN VTYM L++GL DGQ EA KFF MR GM+PD+ TY+++++ C
Sbjct: 410 SNSTTEEDHSIPNSVTYMTLIYGLYLDGQYREAGKFFSCMRESGMVPDSFTYSLLIRGQC 469
Query: 380 QRKHGAEAMTFLADMLK 330
+ AM ADM+K
Sbjct: 470 MLGYVLNAMMLYADMVK 486
>ref|XP_007210813.1| hypothetical protein PRUPE_ppa016961mg, partial [Prunus persica]
gi|462406548|gb|EMJ12012.1| hypothetical protein
PRUPE_ppa016961mg, partial [Prunus persica]
Length = 548
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = -3
Query: 527 PNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTF 348
PN +TY L+ GLC++GQIF+A KFF MR G+ PDALT VI+ + + KH M
Sbjct: 454 PNHITYTALIHGLCEEGQIFKATKFFSDMRCYGLRPDALTCVVILNGHFKAKHMIGVMML 513
Query: 347 LADMLK 330
ADM+K
Sbjct: 514 HADMIK 519
>ref|XP_006661233.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Oryza brachyantha]
Length = 579
Score = 67.0 bits (162), Expect = 4e-09
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = -3
Query: 527 PNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTF 348
PN VTYM L++GL DGQ EA +FF MR GM+PD TY ++++ C + AM
Sbjct: 488 PNSVTYMTLIYGLYMDGQYSEACRFFSYMRDSGMVPDRFTYTLVIRGLCMLGYVFNAMML 547
Query: 347 LADMLK 330
ADM+K
Sbjct: 548 YADMIK 553
>tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 65.1 bits (157), Expect = 2e-08
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = -3
Query: 560 SNQVMNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYC 381
SN + + PN V YM L++GL DGQ EA K F MR GMIPD+ TY ++++ C
Sbjct: 540 SNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQC 599
Query: 380 QRKHGAEAMTFLADMLK 330
+ AM ADM+K
Sbjct: 600 MLGYVLNAMMLYADMMK 616
Score = 56.2 bits (134), Expect = 7e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = -3
Query: 527 PNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTF 348
PN VTY ++ LC++G I +A++ F AM+ GM P+ TY V+M +CQR A+
Sbjct: 219 PNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVL 278
Query: 347 LADMLK 330
++LK
Sbjct: 279 YQELLK 284
>ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546332|gb|EEF47834.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = -3
Query: 590 KLDCITNEGDSNQVMNTGGMFPNKVTYMVLVFGLCKDG------QIFEAKKFFKAMRGLG 429
+L + D + M G+ N V Y L+ G CK+G +IF+A KFF MR G
Sbjct: 373 RLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNG 432
Query: 428 MIPDALTYAVIMQRYCQRKHGAEAMTFLADMLK 330
+ PDAL YAV++Q + KH A+ M ADM+K
Sbjct: 433 LRPDALAYAVMLQGHLNAKHMADVMMLHADMIK 465
>ref|XP_004971940.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Setaria italica]
Length = 618
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = -3
Query: 560 SNQVMNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYC 381
SN + PN V YM L++GL D Q +EA K F MR GM+PD+ TY ++++ C
Sbjct: 526 SNSTTEEDHLIPNGVIYMTLIYGLYIDSQHYEAGKLFSYMRKSGMVPDSFTYTLLIRGQC 585
Query: 380 QRKHGAEAMTFLADMLK 330
+ AM ADM+K
Sbjct: 586 MLGYVLNAMMLYADMMK 602
>ref|XP_004500011.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cicer arietinum]
Length = 614
Score = 63.9 bits (154), Expect = 3e-08
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = -3
Query: 527 PNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTF 348
PN V Y VL+ GLCKDG+IF+A KFF MR G PD + Y ++++ + + H + M
Sbjct: 508 PNDVMYAVLIQGLCKDGRIFKATKFFAEMRCNGFKPDVVLYVIMLEAHFRFNHVIDVMML 567
Query: 347 LADMLK 330
AD+LK
Sbjct: 568 HADVLK 573
>ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 63.9 bits (154), Expect = 3e-08
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = -3
Query: 524 NKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTFL 345
N VTYM L++GL DGQ EA KFF MR M+PD+ TY+++++ C + AM
Sbjct: 527 NSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLY 586
Query: 344 ADMLK 330
ADM+K
Sbjct: 587 ADMVK 591
>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 63.5 bits (153), Expect = 5e-08
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = -3
Query: 587 LDCITNEGDSNQVMNTG-----GMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMI 423
LD +T EG+ + G F N VTY +L+ G C+ G+ EA K M G+GM+
Sbjct: 756 LDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMV 815
Query: 422 PDALTYAVIMQRYCQRKHGAEAMTFLADMLKK 327
PD +TY+ + YC+R + AM ML++
Sbjct: 816 PDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847
>emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = -3
Query: 548 MNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKH 369
M G+ P+ +TY LV GL ++G++ EA KFF + GLG+ P+A+TY IM C+ +
Sbjct: 318 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377
Query: 368 GAEAMTFLADMLKK*RCLP 312
A+ FLA M+ K RC P
Sbjct: 378 TDRAIDFLAYMISK-RCKP 395
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = -3
Query: 548 MNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKH 369
M G P+ VTY VL+ G+CK+G++ EA KF M G P+ +T+ +I++ C
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167
Query: 368 GAEAMTFLADMLKK 327
+A L+DML+K
Sbjct: 168 WMDAEKLLSDMLRK 181
>ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = -3
Query: 548 MNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKH 369
M G+ P+ +TY LV GL ++G++ EA KFF + GLG+ P+A+TY IM C+ +
Sbjct: 487 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 546
Query: 368 GAEAMTFLADMLKK*RCLP 312
A+ FLA M+ K RC P
Sbjct: 547 TDRAIDFLAYMISK-RCKP 564
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = -3
Query: 548 MNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKH 369
M G P+ VTY VL+ G+CK+G++ EA KF M G P+ +T+ +I++ C
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336
Query: 368 GAEAMTFLADMLKK 327
+A L+DML+K
Sbjct: 337 WMDAEKLLSDMLRK 350
>emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = -3
Query: 548 MNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKH 369
M G+ P+ +TY LV GL ++G++ EA KFF + GLG+ P+A+TY IM C+ +
Sbjct: 430 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 489
Query: 368 GAEAMTFLADMLKK*RCLP 312
A+ FLA M+ K RC P
Sbjct: 490 TDRAIDFLAYMISK-RCKP 507
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = -3
Query: 548 MNTGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKH 369
M G P+ VTY VL+ G+CK+G++ EA KF M G P+ +T+ +I++ C
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279
Query: 368 GAEAMTFLADMLKK 327
+A L+DML+K
Sbjct: 280 WMDAEKLLSDMLRK 293
>ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [Amborella trichopoda]
gi|548837495|gb|ERM98263.1| hypothetical protein
AMTR_s00221p00020810 [Amborella trichopoda]
Length = 549
Score = 63.2 bits (152), Expect = 6e-08
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -3
Query: 542 TGGMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGA 363
T G P+ +TY V++ G CK G++ +A K M G++P+ +TY V+++ YC+
Sbjct: 271 TKGWVPDPITYTVMIDGFCKKGRLMDAVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSG 330
Query: 362 EAMTFLADMLKK*RCLPLPRFLWKEVLDASEGDMLC 255
EA++ L +ML+K +F+ L D+LC
Sbjct: 331 EALSLLNEMLEK-------KFIPCSTLCCKIVDLLC 359
>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 63.2 bits (152), Expect = 6e-08
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = -3
Query: 536 GMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEA 357
G+ P+ VTY +L+ GLCK G+I AK F + G G+ P+ +TYA ++ YC+ K+ A
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724
Query: 356 MTFLADMLKK*RCLPLPRFLWKEVLD 279
L +ML R +P F++ +L+
Sbjct: 725 FQLLEEMLL--RGVPPDAFIYNVILN 748
>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 63.2 bits (152), Expect = 6e-08
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = -3
Query: 536 GMFPNKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEA 357
G+ P+ VTY +L+ GLCK G+I AK F + G G+ P+ +TYA ++ YC+ K+ A
Sbjct: 656 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 715
Query: 356 MTFLADMLKK*RCLPLPRFLWKEVLD 279
L +ML R +P F++ +L+
Sbjct: 716 FQLLEEMLL--RGVPPDAFIYNVILN 739
>ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer
homologue A [Oryza sativa Japonica Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa
Japonica Group]
Length = 618
Score = 62.8 bits (151), Expect = 8e-08
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -3
Query: 524 NKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTFL 345
N VTYM L++GL DGQ EA FF MR GM+PD TY ++++ C + AM
Sbjct: 528 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587
Query: 344 ADMLK 330
ADM+K
Sbjct: 588 ADMVK 592
>gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
Length = 577
Score = 62.8 bits (151), Expect = 8e-08
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -3
Query: 524 NKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTFL 345
N VTYM L++GL DGQ EA FF MR GM+PD TY ++++ C + AM
Sbjct: 487 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 546
Query: 344 ADMLK 330
ADM+K
Sbjct: 547 ADMVK 551
>gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 62.8 bits (151), Expect = 8e-08
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -3
Query: 524 NKVTYMVLVFGLCKDGQIFEAKKFFKAMRGLGMIPDALTYAVIMQRYCQRKHGAEAMTFL 345
N VTYM L++GL DGQ EA FF MR GM+PD TY ++++ C + AM
Sbjct: 528 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587
Query: 344 ADMLK 330
ADM+K
Sbjct: 588 ADMVK 592