BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00022185
         (938 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531775.1| pentatricopeptide repeat-containing protein,...   400   e-109
emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]   397   e-108
ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prun...   395   e-107
gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]     384   e-104
ref|XP_002299078.1| hypothetical protein POPTR_0001s47560g [Popu...   373   e-101
ref|XP_006346080.1| PREDICTED: pentatricopeptide repeat-containi...   333   8e-89
ref|XP_004244333.1| PREDICTED: pentatricopeptide repeat-containi...   332   1e-88
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   299   1e-78
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi...   298   2e-78
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr...   298   2e-78
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   298   3e-78
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   291   3e-76
ref|XP_004288820.1| PREDICTED: pentatricopeptide repeat-containi...   290   6e-76
ref|XP_004229576.1| PREDICTED: pentatricopeptide repeat-containi...   290   6e-76
ref|XP_007201172.1| hypothetical protein PRUPE_ppa003481mg [Prun...   290   7e-76
ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prun...   288   2e-75
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   288   3e-75
gb|AEP33760.1| organelle transcript processing 82, partial [Caps...   288   3e-75
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...   287   4e-75
ref|XP_002324235.2| pentatricopeptide repeat-containing family p...   287   4e-75

>ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528611|gb|EEF30631.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  400 bits (1029), Expect = e-109
 Identities = 197/298 (66%), Positives = 239/298 (80%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL+LF +MMVS    NES LVS+LSACA LGAL QGRWIHAY+DR GA   S+ + TAL
Sbjct: 202  EALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADM-SIRLSTAL 260

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAK G + S Y+ FRKM  RD+VTWGA+ISGFA++G+A+KCF+LF +M+ADGI+PN 
Sbjct: 261  IDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNG 320

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            VIFVAILSACSH GYVEEG  YFN M+    I+PS+EHYGCMVDLLGRAGRL+EAEEFI 
Sbjct: 321  VIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFII 380

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            SMPE PNSVIWG++L+ACRTH DL RG  AFRHLIELEP SGDRYKLAG +   +GE++ 
Sbjct: 381  SMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQE 440

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKA 894
            A K+RK+I+++ METT GSSF+EV+ T+HEF+ GD  H +A EIYK+   +   LE A
Sbjct: 441  ATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTIHNEAAEIYKVWKGLNGLLEAA 498



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           ++L LF E+++  +  +  T   VL AC+   AL +G+ +H  + ++G    + ++ ++L
Sbjct: 70  DSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS-PNTHIHSSL 128

Query: 181 VDMYAKSGSL-------------------------------GSSYEVFRKMGVRDVVTWG 267
           + MY  SGS+                                 +  +F +M  +DV +W 
Sbjct: 129 IHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWS 188

Query: 268 AMISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVES 447
           A+I+G   +G   +   LF  M+     PN    V++LSAC+H+G + +G  + +  ++ 
Sbjct: 189 AIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQG-RWIHAYIDR 247

Query: 448 YVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKR 627
                S+     ++D+  + G +Q   +F   MP   + V WGA+++    +   ++   
Sbjct: 248 IGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRR-DIVTWGAIISGFAIYGQAKKCFE 306

Query: 628 AFRHLI 645
            F  ++
Sbjct: 307 LFEEML 312


>emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
          Length = 531

 Score =  397 bits (1021), Expect = e-108
 Identities = 197/290 (67%), Positives = 233/290 (80%), Gaps = 3/290 (1%)
 Frame = +1

Query: 1    EALSLFREMMV---SGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVG 171
            EAL +FREMM+   SGV  NES LVS LSA A LGALDQGRWIHAY+ R GA + S+ +G
Sbjct: 238  EALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWIHAYIRRIGA-KISITLG 296

Query: 172  TALVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIH 351
            T LVDMYAK GS+  SY++FR+M  RDVVTWG M+SGFAMHG+A KCFQLF++MVA G  
Sbjct: 297  TGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTR 356

Query: 352  PNSVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEE 531
            PN VIFVAILSACSH GY+E GHHYFN MV  + I+PS+EHYGCMVDLLGRAG+L EAEE
Sbjct: 357  PNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEE 416

Query: 532  FIESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGE 711
             I SMPE P +VIWGALL+ACR HKDLRRG+RAFR L++LEP  GDRYKLAG + +++GE
Sbjct: 417  LIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGE 476

Query: 712  QENALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKM 861
            +E A  + + IKE E+ETT GSSF+E+N  VHEFV GD  H KARE+Y+M
Sbjct: 477  KEEADNVTRFIKENELETTRGSSFIEINGVVHEFVVGDADHHKAREMYRM 526



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 34/249 (13%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           ++L L+ ++++ G++ +  T   VL  C+ L A+ +G+ +H  V ++G      ++ T+L
Sbjct: 106 DSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVA-PDTHIHTSL 164

Query: 181 VDMYAKS-------------------------------GSLGSSYEVFRKMGVRDVVTWG 267
           + MYAKS                               G +  +  +F KMG +D  TW 
Sbjct: 165 IHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWS 224

Query: 268 AMISGFAMHGKAEKCFQLFNQMVA---DGIHPNSVIFVAILSACSHVGYVEEGHHYFNLM 438
            MI+G+  +G  E+   +F +M+     G+ PN    V+ LSA + +G +++G  + +  
Sbjct: 225 GMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQG-RWIHAY 283

Query: 439 VESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRR 618
           +     K S+     +VD+  + G +  + +    M +  + V WG +++    H   R+
Sbjct: 284 IRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQR-DVVTWGVMMSGFAMHGQARK 342

Query: 619 GKRAFRHLI 645
             + F  ++
Sbjct: 343 CFQLFDEMV 351


>ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prunus persica]
            gi|462404122|gb|EMJ09679.1| hypothetical protein
            PRUPE_ppa018503mg [Prunus persica]
          Length = 509

 Score =  395 bits (1015), Expect = e-107
 Identities = 195/291 (67%), Positives = 232/291 (79%), Gaps = 1/291 (0%)
 Frame = +1

Query: 1    EALSLFREMM-VSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTA 177
            EAL LF++MM +S VS NE+TLVS LSACA LGALDQG+WIHAY D+ GA + SV +GTA
Sbjct: 215  EALGLFQKMMTISEVSPNEATLVSSLSACAHLGALDQGKWIHAYADKIGA-KISVTLGTA 273

Query: 178  LVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPN 357
            L+DMYAK GS+   YEVF+KM  +D+V WG +ISGFA+HG+AEKCF+LF+ MVA+G +PN
Sbjct: 274  LIDMYAKCGSIEHGYEVFKKMPQKDLVAWGVIISGFAIHGQAEKCFELFDDMVANGTYPN 333

Query: 358  SVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFI 537
             +IFVAILSACSH GYVE G+ YF  MV  Y I+PS+EHYGCMVDLLGRAGRL EAEE I
Sbjct: 334  EIIFVAILSACSHAGYVEMGYQYFYQMVHEYGIRPSIEHYGCMVDLLGRAGRLAEAEELI 393

Query: 538  ESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQE 717
             S+PE PNSVIWGALL ACR H DLRRG  AF+HL ELEP SGDRYKLAG + A +GE+E
Sbjct: 394  MSLPEKPNSVIWGALLGACRMHNDLRRGNLAFKHLTELEPMSGDRYKLAGLMFAKAGEKE 453

Query: 718  NALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGE 870
             A K+ KLI+E  +ETT G SF+E++  VH+F AG I+H K  EIYKM GE
Sbjct: 454  TATKITKLIRENNLETTRGLSFIEIDGVVHDFEAGTINHSKYNEIYKMWGE 504



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 54/233 (23%), Positives = 111/233 (47%), Gaps = 33/233 (14%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           +L L+ ++++ G+  +  T   VL AC++L A+ +GR +H  + ++G    + +V ++L+
Sbjct: 83  SLLLYNKLVLDGLKPDSYTYAFVLKACSQLSAIFEGRQVHCRIVKAGTAMDT-HVHSSLI 141

Query: 184 DMYAKS--------------------------------GSLGSSYEVFRKMGVRDVVTWG 267
            MY+ S                                G +  + E+F  M  +D  +W 
Sbjct: 142 HMYSSSTDSLVCAEQVLAGFPEENTIAKNSLISGYLSQGEVEKAREMFDNMVQKDDASWS 201

Query: 268 AMISGFAMHGKAEKCFQLFNQMVA-DGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVE 444
           AMI+G+  +G + +   LF +M+    + PN    V+ LSAC+H+G +++G  + +   +
Sbjct: 202 AMIAGYTKNGMSAEALGLFQKMMTISEVSPNEATLVSSLSACAHLGALDQG-KWIHAYAD 260

Query: 445 SYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTH 603
               K S+     ++D+  + G ++   E  + MP+  + V WG +++    H
Sbjct: 261 KIGAKISVTLGTALIDMYAKCGSIEHGYEVFKKMPQK-DLVAWGVIISGFAIH 312



 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 40/184 (21%), Positives = 80/184 (43%)
 Frame = +1

Query: 112 RWIHAYVDRSGAGRTSVNVGTALVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAM 291
           R +HA +  SG      N G  L+  Y     +  +  VF ++   DV  +  MI G  +
Sbjct: 18  RQVHAQLVVSGLLDRPPNAGR-LLQSYVTVSQIYHASSVFDRISCPDVFAYNNMIRGLIL 76

Query: 292 HGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSME 471
                    L+N++V DG+ P+S  +  +L ACS +  + EG      +V++     +  
Sbjct: 77  GKCPNNSLLLYNKLVLDGLKPDSYTYAFVLKACSQLSAIFEGRQVHCRIVKAGTAMDTHV 136

Query: 472 HYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIEL 651
           H   +         L  AE+ +   PE  N++   +L++   +  ++ + +  F ++++ 
Sbjct: 137 HSSLIHMYSSSTDSLVCAEQVLAGFPEE-NTIAKNSLISGYLSQGEVEKAREMFDNMVQK 195

Query: 652 EPCS 663
           +  S
Sbjct: 196 DDAS 199


>gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]
          Length = 523

 Score =  384 bits (985), Expect = e-104
 Identities = 189/289 (65%), Positives = 226/289 (78%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EALS+F+EM+   VS NES LVS LSAC  LGALDQG WIHAY+D++   + S+ +GTAL
Sbjct: 222  EALSIFQEMVAFRVSPNESALVSSLSACGHLGALDQGMWIHAYIDKNKV-KLSITLGTAL 280

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            VDMYAK G + S Y+VFRK+  RDVVTWGA+ISGFA HGK EKCF+LF +MV++G+ PN 
Sbjct: 281  VDMYAKCGCIESCYKVFRKLPNRDVVTWGAVISGFANHGKPEKCFELFGEMVSEGVRPNE 340

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            VIFVAILSACS  GYVE G  YF+ MV  + I PS+EHYGCMVDLLGRAGRL EAEEFI 
Sbjct: 341  VIFVAILSACSRAGYVELGSQYFHQMVNDFGIVPSIEHYGCMVDLLGRAGRLAEAEEFIV 400

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            +MPE PNS+IWGA L+ACRTHKD +RG  AFRHL+ELEP SGDRYKLAG +   +GE+EN
Sbjct: 401  AMPEKPNSIIWGAFLSACRTHKDPKRGTVAFRHLMELEPTSGDRYKLAGLMFGGAGEREN 460

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLG 867
            A  + K I E ++E T GSSF+E++  V+EFVAG I H + REIY M G
Sbjct: 461  ARVITKFIDENDLEMTRGSSFIEIDGVVNEFVAGSIDHDRCREIYSMCG 509



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 56/231 (24%), Positives = 114/231 (49%), Gaps = 31/231 (13%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           +L ++ +++++G+  +  T   VL AC+ + AL +G+ +H  + ++G      +V ++L+
Sbjct: 91  SLLMYEKLLMNGLIPDNFTYTFVLKACSHMKALIEGKQVHCRMIKAGIA-PDTHVHSSLI 149

Query: 184 DMYAKSGSLGSSYEV-------------------------------FRKMGVRDVVTWGA 270
           +MYA SGS+  +  V                               F KM  +DV +W A
Sbjct: 150 NMYASSGSIACAERVLGEFKEENTLAMNAMISGYLSKGHVDKARAMFEKMAAKDVASWSA 209

Query: 271 MISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESY 450
           +I+G+  +   ++   +F +MVA  + PN    V+ LSAC H+G +++G  + +  ++  
Sbjct: 210 VIAGYRDNAMYKEALSIFQEMVAFRVSPNESALVSSLSACGHLGALDQG-MWIHAYIDKN 268

Query: 451 VIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTH 603
            +K S+     +VD+  + G ++   +    +P N + V WGA+++    H
Sbjct: 269 KVKLSITLGTALVDMYAKCGCIESCYKVFRKLP-NRDVVTWGAVISGFANH 318


>ref|XP_002299078.1| hypothetical protein POPTR_0001s47560g [Populus trichocarpa]
            gi|222846336|gb|EEE83883.1| hypothetical protein
            POPTR_0001s47560g [Populus trichocarpa]
          Length = 488

 Score =  373 bits (957), Expect = e-101
 Identities = 183/284 (64%), Positives = 221/284 (77%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL+LF++MMVS +  NE+ LVS+LSAC +LG L QGRWIHAY+D++     S  + TAL
Sbjct: 206  EALALFQDMMVSHILPNEAALVSLLSACGQLGTLHQGRWIHAYIDKTRV-LMSTKLTTAL 264

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAKSGS+   Y +F+KM  RDVVTWG MIS FA+HG A KCFQLF++M+ADGI PN 
Sbjct: 265  IDMYAKSGSIECGYGLFQKMARRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNK 324

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            VIFVAILSACSH G VEEG  YF+ M   + IKPS+EHYGCMVDLLGRAG L +AE+ I 
Sbjct: 325  VIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLIL 384

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            SMP+ PNS+IWG+LL ACRTH DL+RG  AF +L+ELEP SGDR+KLAG + A +GE+E 
Sbjct: 385  SMPKQPNSIIWGSLLGACRTHNDLKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEE 444

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREI 852
            A K+RK+I EKEM TTCGSSF+EV   VHEF  G   H KAR+I
Sbjct: 445  AAKIRKMIHEKEMVTTCGSSFIEVEGAVHEFTVGYTVHNKARDI 488



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
 Frame = +1

Query: 28  MVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALVDMYAKSGS 207
           M+ G++M+  T   VL AC+ L A  +G+ +H  + ++G      ++ ++L+ MY  SGS
Sbjct: 83  MIRGLTMDNFTYTFVLKACSHLKAPFEGKQVHCQIIKAGIV-PDTHIHSSLIHMYTNSGS 141

Query: 208 LGSSYEV-------------------------------FRKMGVRDVVTWGAMISGFAMH 294
           +  +  V                               F  M  +D  +W A+I+G+  +
Sbjct: 142 IDDAERVLGEFSEENTLAKNAMISGYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKN 201

Query: 295 GKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEH 474
           G   +   LF  M+   I PN    V++LSAC  +G + +G  + +  ++   +  S + 
Sbjct: 202 GMHTEALALFQDMMVSHILPNEAALVSLLSACGQLGTLHQG-RWIHAYIDKTRVLMSTKL 260

Query: 475 YGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTH 603
              ++D+  ++G ++      + M    + V WG +++A   H
Sbjct: 261 TTALIDMYAKSGSIECGYGLFQKMARR-DVVTWGVMISAFAIH 302


>ref|XP_006346080.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Solanum tuberosum]
          Length = 527

 Score =  333 bits (853), Expect = 8e-89
 Identities = 165/289 (57%), Positives = 212/289 (73%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            +AL+ F++MM   V +NES+LV  LSAC  LGALDQGRWIH Y+        SVN+GTAL
Sbjct: 242  DALATFQKMMSYNVPLNESSLVCTLSACGELGALDQGRWIHKYIINKREIVISVNLGTAL 301

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            VDMYAK G +  SY++F KM  RDVVTWG +IS FA HG+A+ CFQLF++M+  G+ PN 
Sbjct: 302  VDMYAKCGCVEFSYQLFEKMPRRDVVTWGVIISSFATHGQAKLCFQLFDEMIESGVEPNG 361

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            V+FVAILSACSH G VE+G HYF+ MV  + I+PS+EH+GCMVDLLGR GRL EAE+ I 
Sbjct: 362  VVFVAILSACSHAGLVEQGCHYFDQMVHQFGIRPSIEHFGCMVDLLGRTGRLAEAEQLIL 421

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            SMPE PNSVI GAL  ACR H D+ RG+  F+ LI LEP S DRYKLA H+ A +GE   
Sbjct: 422  SMPEAPNSVILGALFNACRIHNDIERGRPLFKRLINLEP-SPDRYKLAAHLFANNGEDH- 479

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLG 867
              ++RKL+K + +ET CG S ++V+   HEF+  DI++ +A+++Y+ LG
Sbjct: 480  --EIRKLLKGELLETRCGLSNIQVDGVDHEFMVSDIANDRAQDVYETLG 526



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           E+L L+  ++  G+S +  T   VL AC+ L A+ +G+ +HA + + G    + ++ ++L
Sbjct: 108 ESLFLYERLVTDGLSPDSHTYTFVLKACSHLKAVLEGKTVHAQIIKKGI-EPNTHICSSL 166

Query: 181 VDMYAKSGSLGS---------------------------------SYEVFRKMGVRDVVT 261
           + MY+ +G + S                                 + E+F  MG +D  T
Sbjct: 167 ISMYSCAGDMASAKQVLDEFSEHNNVICPFNSMITGYMNEGLVEEAIEIFDTMGNKDTAT 226

Query: 262 WGAMISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMV 441
           W AM+SG+  +G  E     F +M++  +  N    V  LSAC  +G +++G      ++
Sbjct: 227 WSAMLSGYVKNGMHEDALATFQKMMSYNVPLNESSLVCTLSACGELGALDQGRWIHKYII 286

Query: 442 ESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRG 621
               I  S+     +VD+  + G ++ + +  E MP   + V WG ++++  TH   +  
Sbjct: 287 NKREIVISVNLGTALVDMYAKCGCVEFSYQLFEKMPRR-DVVTWGVIISSFATHGQAKLC 345

Query: 622 KRAFRHLIE 648
            + F  +IE
Sbjct: 346 FQLFDEMIE 354


>ref|XP_004244333.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Solanum lycopersicum]
          Length = 527

 Score =  332 bits (852), Expect = 1e-88
 Identities = 163/289 (56%), Positives = 212/289 (73%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            +AL+ F++MM   V +NE++LV  LS+C  LGALDQGRW+H Y+        SVN+GTAL
Sbjct: 242  DALATFQKMMSYNVPLNEASLVCTLSSCGELGALDQGRWLHKYIINKRETVMSVNLGTAL 301

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            VDMYAK G +  SY++F KM  RDVVTWG ++S FA HG+A+ CFQLF++M+  G+ PN 
Sbjct: 302  VDMYAKCGCIEFSYQLFEKMPRRDVVTWGVILSSFATHGQAKLCFQLFDKMIESGVEPNG 361

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            V+FVAILSACSH G VEEG HYF+ MV  + I+PS+EH+GCMVDLLGRAGRL EAE+ I 
Sbjct: 362  VVFVAILSACSHAGLVEEGCHYFDQMVHQFGIRPSIEHFGCMVDLLGRAGRLAEAEQLIL 421

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            SMPE PNSVI GAL  ACR H D+ RG+  F+ LI LEP S DRYKLA  + A +GE   
Sbjct: 422  SMPEEPNSVILGALFNACRIHNDVERGRHLFKRLINLEP-SPDRYKLAASLFANNGEDH- 479

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLG 867
              ++RKL+ +K +ET CG S ++V+   HEF+  DI++ KA+++Y+ LG
Sbjct: 480  --EIRKLLNDKILETRCGLSNIQVDGVDHEFMVSDIANDKAQDVYETLG 526



 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 33/249 (13%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           E+L L+  ++  G+S +  T   VL AC+ + A+ +G+ +HA + + G  + + ++ ++L
Sbjct: 108 ESLFLYERLVTDGLSPDSHTYTFVLKACSHMKAVLEGKTVHAQIMKKGI-KPNTHICSSL 166

Query: 181 VDMYAKSGSLGS---------------------------------SYEVFRKMGVRDVVT 261
           + MY+ +G + S                                 + E+F  MG +D  T
Sbjct: 167 ISMYSCAGDMASARQVLDEFSEPNNVICPFNSMITGYMNEGLVEEAIEIFDTMGNKDTAT 226

Query: 262 WGAMISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMV 441
           W  M+SG+  +G  E     F +M++  +  N    V  LS+C  +G +++G      ++
Sbjct: 227 WSVMLSGYVKNGMHEDALATFQKMMSYNVPLNEASLVCTLSSCGELGALDQGRWLHKYII 286

Query: 442 ESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRG 621
                  S+     +VD+  + G ++ + +  E MP   + V WG +L++  TH   +  
Sbjct: 287 NKRETVMSVNLGTALVDMYAKCGCIEFSYQLFEKMPRR-DVVTWGVILSSFATHGQAKLC 345

Query: 622 KRAFRHLIE 648
            + F  +IE
Sbjct: 346 FQLFDKMIE 354


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508783730|gb|EOY30986.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 847

 Score =  299 bits (765), Expect = 1e-78
 Identities = 139/307 (45%), Positives = 206/307 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL LFR M+ S +  ++ T +SVL ACA LGALD G+WIHAY+D++    T++++ T+L
Sbjct: 404  EALGLFRRMLRSNIEPSDVTFLSVLPACANLGALDLGKWIHAYIDKNFQNSTNISLWTSL 463

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAK GS+ ++ +VF  M  +++ +W AMISG AMHG A+K  +LF+QM+  G+ P+ 
Sbjct: 464  IDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPDD 523

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + FV +LSAC+H G ++ G  YF+ MV+ Y I P ++HYGCMV+LLGRAG   EAE  I+
Sbjct: 524  ITFVGVLSACTHAGLLDLGRQYFSSMVQEYAISPDLQHYGCMVNLLGRAGLFDEAEALIQ 583

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            +M   P+  IWG+LL ACR HK +  G+   + L+ELEP +   Y L  ++ A +G  ++
Sbjct: 584  NMEMKPDGAIWGSLLGACRVHKRVELGESVAQRLLELEPDNPGAYVLLSNIYAGAGRWDD 643

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
              ++R L+  K M+   G S +EV+  VHEF+  D  H + +EIY ML E++  LEKAGF
Sbjct: 644  VARIRTLLNNKGMKKVPGCSSIEVDSVVHEFLVSDKVHPRCKEIYDMLNEVDTLLEKAGF 703

Query: 901  LVEKEEL 921
            + +  E+
Sbjct: 704  VPDTSEV 710



 Score =  133 bits (335), Expect = 9e-29
 Identities = 63/201 (31%), Positives = 121/201 (60%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL+ F EM+ + V  NESTLVSVLSACA+ G+L+ G W+ ++++  G G +++++  AL
Sbjct: 303 EALAFFEEMIGANVVPNESTLVSVLSACAQSGSLELGTWVRSWINEHGLG-SNIHLANAL 361

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +DMY+K G L +++++F  +  RDV++W  MI G+      ++   LF +M+   I P+ 
Sbjct: 362 IDMYSKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSD 421

Query: 361 VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
           V F+++L AC+++G ++ G      + +++    ++  +  ++D+  + G ++ A++   
Sbjct: 422 VTFLSVLPACANLGALDLGKWIHAYIDKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFN 481

Query: 541 SMPENPNSVIWGALLAACRTH 603
            M E  N   W A+++    H
Sbjct: 482 GM-EQKNLASWNAMISGLAMH 501



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 33/250 (13%)
 Frame = +1

Query: 7   LSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALVD 186
           L  + +M+ SG+  N  T   VL +CA+  +  +G+ IH  V + G   +   V T+L++
Sbjct: 173 LEFYVKMIWSGIVPNSYTFPFVLKSCAKTASTQEGKQIHGQVLKLGL-ESDAFVHTSLIN 231

Query: 187 MYAKSGSLGSSYEVFRK-------------------------------MGVRDVVTWGAM 273
           MYA++G  G++  VF K                               + +RDVV+W AM
Sbjct: 232 MYAQNGEFGNARLVFDKSHLRDTVSYTALITGYVSIGYMENARKLFDEIPIRDVVSWNAM 291

Query: 274 ISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESYV 453
           I+G+A  G+ E+    F +M+   + PN    V++LSAC+  G +E G  +    +  + 
Sbjct: 292 IAGYAQTGQHEEALAFFEEMIGANVVPNESTLVSVLSACAQSGSLELG-TWVRSWINEHG 350

Query: 454 IKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRAF 633
           +  ++     ++D+  + G L  A +  E + +  + + W  ++         +     F
Sbjct: 351 LGSNIHLANALIDMYSKCGDLDTAFDLFEGLQQR-DVISWNVMIGGYTHMSYYKEALGLF 409

Query: 634 RHLI--ELEP 657
           R ++   +EP
Sbjct: 410 RRMLRSNIEP 419


>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Citrus sinensis]
          Length = 736

 Score =  298 bits (764), Expect = 2e-78
 Identities = 139/307 (45%), Positives = 207/307 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL LFR+M+ S +  N+ T +SVL ACA LGALD G+WIHAY+D++     +V++ T+L
Sbjct: 346  EALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSL 405

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAK G++ ++ +VF  MG + + +W AMISG AMHGKA+K   LF++M+ +G+ P+ 
Sbjct: 406  IDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDD 465

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + FV +LSAC+H G ++ G  YFN M++ Y I P ++HYGCMVDLLGRAG   EAE  ++
Sbjct: 466  ITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLK 525

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            +M   P++ IW +LL ACR H  L  G+   +HL+ELEP +   Y L  ++ A +G  ++
Sbjct: 526  TMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDD 585

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
               +R  + +K M+   G S +EV   VHEF+ GD  H +++ IY+ML EI+  LEK+GF
Sbjct: 586  VATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGF 645

Query: 901  LVEKEEL 921
            + +  E+
Sbjct: 646  VPDTSEV 652



 Score =  123 bits (309), Expect = 9e-26
 Identities = 62/215 (28%), Positives = 120/215 (55%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL++F+++       NEST+V+VLSACA +G+L+ G W+ + ++  G G ++++V  AL
Sbjct: 245 EALAIFQKIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG-SNLHVTNAL 303

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +DMY+K G L  + ++F  +  RDV++W  MI G+      ++   LF QM+   I PN 
Sbjct: 304 IDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPND 363

Query: 361 VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
           V F+++L AC+++G ++ G      + +++    ++  +  ++D+  + G ++ AE+  +
Sbjct: 364 VTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFD 423

Query: 541 SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLI 645
            M        W A+++    H    +    F  +I
Sbjct: 424 GMGYK-TLASWNAMISGLAMHGKADKALSLFSRMI 457



 Score =  109 bits (273), Expect = 1e-21
 Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 33/251 (13%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           A+  +  M++SG   N  T   +L +CA++ A+ +G+ IHA+V + G   +   V T+L+
Sbjct: 114 AIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGL-ESDPFVHTSLI 172

Query: 184 DMYAKSGSLGSSYEVFRK-------------------------------MGVRDVVTWGA 270
           +MYA++G L S+  VF K                               M VRDVV+W A
Sbjct: 173 NMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPVRDVVSWNA 232

Query: 271 MISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESY 450
           MI+G+A  G+ E+   +F ++  +   PN    V +LSAC+H+G +E G+   +L +E +
Sbjct: 233 MIAGYAQSGRYEEALAIFQKIREENFVPNESTVVTVLSACAHMGSLELGNWVCSL-IEGH 291

Query: 451 VIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRA 630
            +  ++     ++D+  + G L +A +  ES+ E  + + W  ++       D +     
Sbjct: 292 GLGSNLHVTNALIDMYSKCGDLVKARDLFESI-EKRDVISWNVMIGGYTHTSDYKEALML 350

Query: 631 FRHLIE--LEP 657
           FR +++  +EP
Sbjct: 351 FRQMLQSNIEP 361


>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
            gi|557554208|gb|ESR64222.1| hypothetical protein
            CICLE_v10010823mg [Citrus clementina]
          Length = 736

 Score =  298 bits (764), Expect = 2e-78
 Identities = 139/307 (45%), Positives = 207/307 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL LFR+M+ S +  N+ T +SVL ACA LGALD G+WIHAY+D++     +V++ T+L
Sbjct: 346  EALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSL 405

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAK G++ ++ +VF  MG + + +W AMISG AMHGKA+K   LF++M+ +G+ P+ 
Sbjct: 406  IDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDD 465

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + FV +LSAC+H G ++ G  YFN M++ Y I P ++HYGCMVDLLGRAG   EAE  ++
Sbjct: 466  ITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLK 525

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            +M   P++ IW +LL ACR H  L  G+   +HL+ELEP +   Y L  ++ A +G  ++
Sbjct: 526  TMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDD 585

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
               +R  + +K M+   G S +EV   VHEF+ GD  H +++ IY+ML EI+  LEK+GF
Sbjct: 586  VATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGF 645

Query: 901  LVEKEEL 921
            + +  E+
Sbjct: 646  VPDTSEV 652



 Score =  123 bits (309), Expect = 9e-26
 Identities = 62/215 (28%), Positives = 120/215 (55%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL++F+++       NEST+V+VLSACA +G+L+ G W+ + ++  G G ++++V  AL
Sbjct: 245 EALAIFQKIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG-SNLHVTNAL 303

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +DMY+K G L  + ++F  +  RDV++W  MI G+      ++   LF QM+   I PN 
Sbjct: 304 IDMYSKCGGLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPND 363

Query: 361 VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
           V F+++L AC+++G ++ G      + +++    ++  +  ++D+  + G ++ AE+  +
Sbjct: 364 VTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFD 423

Query: 541 SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLI 645
            M        W A+++    H    +    F  +I
Sbjct: 424 GMGYK-TLASWNAMISGLAMHGKADKALSLFSRMI 457



 Score =  109 bits (273), Expect = 1e-21
 Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 33/251 (13%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           A+  +  M++SG   N  T   +L +CA++ A+ +G+ IHA+V + G   +   V T+L+
Sbjct: 114 AIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGL-ESDPFVHTSLI 172

Query: 184 DMYAKSGSLGSSYEVFRK-------------------------------MGVRDVVTWGA 270
           +MYA++G L S+  VF K                               M VRDVV+W A
Sbjct: 173 NMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPVRDVVSWNA 232

Query: 271 MISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESY 450
           MI+G+A  G+ E+   +F ++  +   PN    V +LSAC+H+G +E G+   +L +E +
Sbjct: 233 MIAGYAQSGRYEEALAIFQKIREENFVPNESTVVTVLSACAHMGSLELGNWVCSL-IEGH 291

Query: 451 VIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRA 630
            +  ++     ++D+  + G L +A +  ES+ E  + + W  ++       D +     
Sbjct: 292 GLGSNLHVTNALIDMYSKCGGLVKARDLFESI-EKRDVISWNVMIGGYTHTSDYKEALML 350

Query: 631 FRHLIE--LEP 657
           FR +++  +EP
Sbjct: 351 FRQMLQSNIEP 361


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  298 bits (762), Expect = 3e-78
 Identities = 144/307 (46%), Positives = 205/307 (66%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL+LFR+M  S V  N+ T VS+L ACA LGALD G+WIHAY+D+   G T+ ++ T+L
Sbjct: 348  EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAK G++ ++ +VF  M  + + +W AMISG AMHG A    +LF QM  +G  P+ 
Sbjct: 408  IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + FV +LSACSH G VE G   F+ MVE Y I P ++HYGCM+DLLGRAG   EAE  ++
Sbjct: 468  ITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMK 527

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            +M   P+  IWG+LL ACR H ++  G+ A +HL ELEP +   Y L  ++ AT+G  ++
Sbjct: 528  NMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDD 587

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
              ++R  + +K M+   G S +EV+  VHEF+ GD  H ++++IYKML EI++ LEKAG 
Sbjct: 588  VARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGH 647

Query: 901  LVEKEEL 921
            + +  E+
Sbjct: 648  VPDTSEV 654



 Score =  126 bits (316), Expect = 1e-26
 Identities = 63/215 (29%), Positives = 122/215 (56%), Gaps = 1/215 (0%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL+ F+EM  + V+ NEST+V+VLSACA+ G+L+ G W+ ++++  G G +++ +  AL
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLG-SNLRLVNAL 305

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +DMY+K G L  + ++F  +  +D+++W  MI G++     ++   LF +M    + PN 
Sbjct: 306 IDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPND 365

Query: 361 VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
           V FV+IL AC+++G ++ G      + + ++   +   +  ++D+  + G ++ A++   
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425

Query: 541 SMPENPNSV-IWGALLAACRTHKDLRRGKRAFRHL 642
            M   P S+  W A+++    H         FR +
Sbjct: 426 GM--KPKSLGSWNAMISGLAMHGHANMALELFRQM 458



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           A+  +  M++ GV  N  T   +L +CA++GA  +G+ IH +V + G   +   V T+L+
Sbjct: 116 AIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGL-ESDPFVHTSLI 174

Query: 184 DMYAKSGSLGSSYEVFRKMG-------------------------------VRDVVTWGA 270
           +MYA++G LG +  VF K                                 VRD V+W A
Sbjct: 175 NMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNA 234

Query: 271 MISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESY 450
           MI+G+A  G+ E+    F +M    + PN    V +LSAC+  G +E G ++    +E +
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG-NWVRSWIEDH 293

Query: 451 VIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRA 630
            +  ++     ++D+  + G L +A +  E + E  + + W  ++         +     
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSYKEALAL 352

Query: 631 FRHL 642
           FR +
Sbjct: 353 FRKM 356


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 640

 Score =  291 bits (745), Expect = 3e-76
 Identities = 140/300 (46%), Positives = 201/300 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            E L LF++MM   +  NES LV+ LSACA LGA++QG+WI  Y++R    R +V +GTAL
Sbjct: 251  EGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNV-RLTVRLGTAL 309

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMY+K GS+  + EVF KM  ++V+ W AMI+G A++G+ +    LF+QM   G+ PN 
Sbjct: 310  IDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNE 369

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            V F+ IL+ACSH   V+EG  +F+ M   Y +KP+  H+ CMVDL GRAG L +A+  I+
Sbjct: 370  VTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIK 429

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            SMP  PNS IWGALL ACR H D   G++  + L+EL+P  G RY L  ++ A  G  + 
Sbjct: 430  SMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDR 489

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
              +LR++++E+++  T G SF+++ DT+HEFVAGD SH +   IY  LGE+ + L+ AG+
Sbjct: 490  VAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGY 549



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNE-STLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTA 177
           +A+  + EM  S V   +  T   +L AC+ + +L  G  IH++V + G   + V+V   
Sbjct: 118 DAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWS-SEVSVSNF 176

Query: 178 LVDMYAKSGSL--------------GSSYEV-----------------FRKMGVRDVVTW 264
           LV MYA  G +              G+S+ +                 F  M  RDVV+W
Sbjct: 177 LVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSW 236

Query: 265 GAMISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVE 444
             MI+G+    + ++   LF  M+ + I PN  + V  LSAC+H+G +E+G  +    +E
Sbjct: 237 SVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQG-QWIERYME 295

Query: 445 SYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALL 585
              ++ ++     ++D+  + G ++ A E    M E  N + W A++
Sbjct: 296 RKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEK-NVLAWSAMI 341


>ref|XP_004288820.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Fragaria vesca subsp. vesca]
          Length = 659

 Score =  290 bits (742), Expect = 6e-76
 Identities = 142/308 (46%), Positives = 209/308 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EA  LFR M + G   ++ T+VS+L AC+ LGAL+ G+W+HAY+++       V +GT L
Sbjct: 270  EAFLLFRRMQLEGEKGDKVTMVSLLLACSNLGALELGKWLHAYIEKQKI-EVDVALGTTL 328

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            VDMYAK GS+  + +VFR +  +D++TW A+ISGFAM G+ +K  + F++M   G+ P++
Sbjct: 329  VDMYAKCGSIDIASDVFRTLPEKDLMTWTALISGFAMCGEGKKALEHFHEMQMSGVKPDA 388

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            ++FV +L+ACSH G V+E   +FN M E Y I+PS+EHYGCMVD+LGRAGR+ EAEE I+
Sbjct: 389  IVFVGVLAACSHAGLVDEALSHFNSMSEVYGIQPSIEHYGCMVDVLGRAGRIAEAEELIQ 448

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
             M   P+  + G LL ACR H +L   +RA + L+EL P     Y L  ++ ++ G+ E 
Sbjct: 449  KMQMKPDRFVLGGLLGACRIHGNLEAAERAAKQLLELSPYDEGTYVLLSNLYSSMGKWEE 508

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
            A K+RKL+ E+ ++   G S +EV+ TVHEFV GD SH +   IY+ML ++  RL+KAG+
Sbjct: 509  AKKIRKLMAERNIKKPPGCSLIEVDGTVHEFVKGDSSHQQTANIYEMLDDMISRLKKAGY 568

Query: 901  LVEKEELS 924
            + +K E+S
Sbjct: 569  VPQKSEVS 576



 Score =  106 bits (265), Expect = 1e-20
 Identities = 65/218 (29%), Positives = 115/218 (52%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL LF +M    V  NE TL++VL+AC     L+  + +H Y++  G G + + + TAL
Sbjct: 169 EALKLFDKMGRENVDPNEVTLLNVLTACGMARDLETAKRVHRYIEDYGFG-SHLKLSTAL 227

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +D+Y K G +  + E+F KM  +++  W  MI+G       ++ F LF +M  +G   + 
Sbjct: 228 MDVYCKCGCVSLARELFDKMPEKNLFCWNIMINGHVEESNYDEAFLLFRRMQLEGEKGDK 287

Query: 361 VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
           V  V++L ACS++G +E G  + +  +E   I+  +     +VD+  + G +  A +   
Sbjct: 288 VTMVSLLLACSNLGALELG-KWLHAYIEKQKIEVDVALGTTLVDMYAKCGSIDIASDVFR 346

Query: 541 SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELE 654
           ++PE  + + W AL++          GK+A  H  E++
Sbjct: 347 TLPEK-DLMTWTALISGFAM---CGEGKKALEHFHEMQ 380



 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 9/273 (3%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EA+S + EM+V G   +  T  S+  +C  LG   +G+ +H    + G    S  +   L
Sbjct: 71  EAISFYHEMIVQGWIPDRFTFPSLFKSCKDLG---EGKQLHCQSTKLGFASDSY-IQNTL 126

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           ++MY+  G L SS +VF KM  + VV+W  MI  +A   ++ +  +LF++M  + + PN 
Sbjct: 127 MNMYSNCGCLVSSRKVFDKMSDKSVVSWATMIDAYAQWDQSTEALKLFDKMGRENVDPNE 186

Query: 361 VIFVAILSACSHVGYVEEG---HHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEE 531
           V  + +L+AC     +E     H Y    +E Y     ++    ++D+  + G +  A E
Sbjct: 187 VTLLNVLTACGMARDLETAKRVHRY----IEDYGFGSHLKLSTALMDVYCKCGCVSLARE 242

Query: 532 FIESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGE 711
             + MPE  N   W  ++       +       FR + +LE   GD+  +   +LA S  
Sbjct: 243 LFDKMPEK-NLFCWNIMINGHVEESNYDEAFLLFRRM-QLEGEKGDKVTMVSLLLACS-- 298

Query: 712 QENALKLRKLI-----KEK-EMETTCGSSFVEV 792
              AL+L K +     K+K E++   G++ V++
Sbjct: 299 NLGALELGKWLHAYIEKQKIEVDVALGTTLVDM 331


>ref|XP_004229576.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Solanum lycopersicum]
          Length = 624

 Score =  290 bits (742), Expect = 6e-76
 Identities = 143/305 (46%), Positives = 210/305 (68%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL LFR+M++S V  NE T+V+ LSACA++G L+ GRWIHAYV +S   + + +VGTA 
Sbjct: 236  EALVLFRKMLLSKVKPNEVTVVAALSACAQMGVLESGRWIHAYV-KSNRIQINKHVGTAF 294

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMY+KSGSL  +  VF +M  +DV+TW +MI G+AMHG + +  QLFN+M   G+ P  
Sbjct: 295  IDMYSKSGSLEDARMVFDQMRDKDVITWNSMIVGYAMHGFSLEALQLFNEMCKLGLQPTD 354

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + F+ ILSAC++ G + EG  YF LM E Y+I+P +EHYGCMV+LLGRAG+L++A EF++
Sbjct: 355  ITFIGILSACANAGLLSEGWTYFQLM-EKYLIEPKIEHYGCMVNLLGRAGQLEKAYEFVK 413

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            SM  + + ++WG LL ACR H D+R  ++    L+E +  +   Y L  ++ A SG+ + 
Sbjct: 414  SMKIDSDPILWGTLLTACRIHGDVRLAEKIMEFLVEQDLATSGTYVLLSNIYAASGDWDG 473

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
              K+R L+K   ++   G S +EVN+ VHEF+AGD+ H K++EIY ML E+ + LE  G+
Sbjct: 474  VAKVRALMKRSGVDKEPGCSSIEVNNKVHEFLAGDMKHPKSKEIYIMLEEVNKLLEAHGY 533

Query: 901  LVEKE 915
            L + +
Sbjct: 534  LPQTD 538



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 31/248 (12%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           +A  L+ +M+   +  N  T  S+L  C     L+ G+ +H    + G   +   V TAL
Sbjct: 108 QAFVLYIQMLTHNIEPNAFTFSSMLKTCP----LESGKALHCQALKLGY-ESDTYVRTAL 162

Query: 181 VDMYAKSGSLGSSYEVFRKM------------------------GV-------RDVVTWG 267
           VD+YA+   + S+ ++F  M                        GV       RDVV W 
Sbjct: 163 VDVYARGSDIVSACKLFDTMTERSLVSLTTMITGYAKNGHIQEAGVLFEGMEDRDVVCWN 222

Query: 268 AMISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVES 447
           AMI G++ HG+  +   LF +M+   + PN V  VA LSAC+ +G +E G  + +  V+S
Sbjct: 223 AMIDGYSQHGRPNEALVLFRKMLLSKVKPNEVTVVAALSACAQMGVLESG-RWIHAYVKS 281

Query: 448 YVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKR 627
             I+ +       +D+  ++G L++A    + M  + + + W +++     H       +
Sbjct: 282 NRIQINKHVGTAFIDMYSKSGSLEDARMVFDQM-RDKDVITWNSMIVGYAMHGFSLEALQ 340

Query: 628 AFRHLIEL 651
            F  + +L
Sbjct: 341 LFNEMCKL 348


>ref|XP_007201172.1| hypothetical protein PRUPE_ppa003481mg [Prunus persica]
            gi|462396572|gb|EMJ02371.1| hypothetical protein
            PRUPE_ppa003481mg [Prunus persica]
          Length = 571

 Score =  290 bits (741), Expect = 7e-76
 Identities = 150/313 (47%), Positives = 206/313 (65%), Gaps = 4/313 (1%)
 Frame = +1

Query: 1    EALSLFREMMV---SGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVG 171
            EAL+LFREM +    G   NE T+ SVL AC RLGAL+ G+W+HAY+D+SG     V +G
Sbjct: 178  EALALFREMQMLDADGTRPNEFTMSSVLLACGRLGALEHGKWVHAYIDKSGM-EIDVILG 236

Query: 172  TALVDMYAKSGSLGSSYEVFRKMGV-RDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGI 348
            TALVDMYAK GS+  +  VF  MG  +DV+ W +MISG AMHG A +C +LF++MV  G+
Sbjct: 237  TALVDMYAKCGSIEKAKWVFDNMGPSKDVMAWSSMISGLAMHGLATECLELFSEMVKCGV 296

Query: 349  HPNSVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAE 528
             PN+V FV +L AC H G V EG  YF  M E + +KP ++HYGC+VDL GRAG ++EA 
Sbjct: 297  RPNAVTFVGVLCACVHGGLVGEGKEYFRRMDEEFGVKPLIQHYGCIVDLYGRAGLVREAL 356

Query: 529  EFIESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSG 708
            + ++SMP  P+ +IWGALL+  R  KD+   + A ++LI+L+P +   Y L  +V A  G
Sbjct: 357  KVVQSMPMEPDVLIWGALLSGSRMQKDIETSEIALKNLIQLDPTNSGAYVLLSNVYAKMG 416

Query: 709  EQENALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLE 888
                  ++R L++E+E++   G S VEV   +HEF  GD SH ++REIY ML EI +RL+
Sbjct: 417  RWSEVTRVRDLMEEREIKKVPGCSLVEVGGVLHEFSVGDDSHPESREIYMMLDEIMKRLK 476

Query: 889  KAGFLVEKEELSL 927
              GF+    E+ L
Sbjct: 477  LRGFVGNTSEVLL 489



 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
 Frame = +1

Query: 7   LSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALVD 186
           LS+F  M + GV  +  T   +L +   L  L  G+ IHA     G       V T+L+ 
Sbjct: 48  LSVFLRMRLHGVVPDNRTFPFLLQSFGSLPYLQSGKQIHAQAFLFGFTHDPF-VQTSLIH 106

Query: 187 MYAKSGSL-------------------------------GSSYEVFRKMGVRDVVTWGAM 273
           MY+  G+L                               G++ +VF KM  R+V++W  +
Sbjct: 107 MYSSCGNLMLARQVFDEIYEPDLPSWNSIMNAYSKVGLIGNARDVFDKMPHRNVISWSCV 166

Query: 274 ISGFAMHGKAEKCFQLFNQMV---ADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVE 444
           I G+ M G  ++   LF +M    ADG  PN     ++L AC  +G +E G       V 
Sbjct: 167 IKGYVMCGGYKEALALFREMQMLDADGTRPNEFTMSSVLLACGRLGALEHGK-----WVH 221

Query: 445 SYVIKPSME----HYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTH 603
           +Y+ K  ME        +VD+  + G +++A+   ++M  + + + W ++++    H
Sbjct: 222 AYIDKSGMEIDVILGTALVDMYAKCGSIEKAKWVFDNMGPSKDVMAWSSMISGLAMH 278


>ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prunus persica]
            gi|462399001|gb|EMJ04669.1| hypothetical protein
            PRUPE_ppa024598mg [Prunus persica]
          Length = 722

 Score =  288 bits (738), Expect = 2e-75
 Identities = 143/309 (46%), Positives = 209/309 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EA  LFREM + G   ++ T+VS+L AC+ LGAL+ G+W+HAY+++       V +GT L
Sbjct: 333  EAFVLFREMQLKGEKGDKVTMVSLLLACSHLGALELGKWLHAYIEKEKI-EVDVTLGTTL 391

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            VDMYAK GS+  + EVFRK+  +DV+TW A+ISGFA  G+ +K  + F++M   G+ P++
Sbjct: 392  VDMYAKCGSIDGASEVFRKLLEKDVMTWTALISGFASCGQGKKALEHFHEMQTSGVKPDA 451

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + FV +L+ACSH G V+EG  +FN M E Y I+PS+EHYGCMVD+LGRAGR+ EAEE I 
Sbjct: 452  ITFVGVLAACSHAGLVDEGISHFNSMHEVYGIQPSIEHYGCMVDILGRAGRIAEAEELIR 511

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
             M   P+  + G LL ACR H +L   +RA + L+EL+P     Y L  ++ ++  + E 
Sbjct: 512  KMQMPPDRFVLGGLLGACRVHGNLEAAERAAQQLLELDPDDDGAYVLLSNLYSSMKKWEE 571

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
            A ++R+L+ E+ ++   G S +EV+  VHEFV GD SH ++  IY+ML ++  RL+KAG+
Sbjct: 572  AKRIRELMAERNVKKAPGCSLIEVDGIVHEFVKGDSSHPQSTHIYEMLQDMIERLKKAGY 631

Query: 901  LVEKEELSL 927
            + EK E+ L
Sbjct: 632  VPEKSEVLL 640



 Score =  108 bits (270), Expect = 3e-21
 Identities = 67/218 (30%), Positives = 114/218 (52%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL LF +M    V  NE TLV+VL+ACA+   L   + +H Y++  G G   + + TAL
Sbjct: 232 EALKLFDKMESGSVDPNEVTLVNVLTACAKARDLKMAKRVHQYIEEYGFGN-HLKLNTAL 290

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +D+Y K G +  + ++F KM  +++ +W  MI+G       ++ F LF +M   G   + 
Sbjct: 291 MDVYCKCGCVLLARDLFDKMPEKNLFSWNIMINGHVEDSNYDEAFVLFREMQLKGEKGDK 350

Query: 361 VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
           V  V++L ACSH+G +E G  + +  +E   I+  +     +VD+  + G +  A E   
Sbjct: 351 VTMVSLLLACSHLGALELG-KWLHAYIEKEKIEVDVTLGTTLVDMYAKCGSIDGASEVFR 409

Query: 541 SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELE 654
            + E  + + W AL++         +GK+A  H  E++
Sbjct: 410 KLLEK-DVMTWTALISG---FASCGQGKKALEHFHEMQ 443



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 9/273 (3%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EA+  ++EM++ G   +  T  S+  +C   G L +G+ +H +  + G    S  +   L
Sbjct: 134 EAIFFYQEMIIQGWVPDRFTFPSLFKSC---GDLWEGKQLHCHSTKLGFASDSY-IQNTL 189

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           ++MY+  G L S+  VF KM  + VV+W  MI  +A   +  +  +LF++M +  + PN 
Sbjct: 190 MNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKMESGSVDPNE 249

Query: 361 VIFVAILSACS---HVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEE 531
           V  V +L+AC+    +   +  H Y    +E Y     ++    ++D+  + G +  A +
Sbjct: 250 VTLVNVLTACAKARDLKMAKRVHQY----IEEYGFGNHLKLNTALMDVYCKCGCVLLARD 305

Query: 532 FIESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGE 711
             + MPE  N   W  ++       +       FR + +L+   GD+  +   +LA S  
Sbjct: 306 LFDKMPEK-NLFSWNIMINGHVEDSNYDEAFVLFREM-QLKGEKGDKVTMVSLLLACS-- 361

Query: 712 QENALKLRKLI-----KEK-EMETTCGSSFVEV 792
              AL+L K +     KEK E++ T G++ V++
Sbjct: 362 HLGALELGKWLHAYIEKEKIEVDVTLGTTLVDM 394


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449529868|ref|XP_004171920.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  288 bits (736), Expect = 3e-75
 Identities = 132/307 (42%), Positives = 207/307 (67%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            EAL+LFREM+ SGV   E T +S+L +CA LGA+D G+WIHAY++++     S ++ T+L
Sbjct: 345  EALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN-FNSVSTSLSTSL 403

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +D+YAK G++ ++ +VF  M ++ + +W AMI G AMHG+A+K F+LF++M +DGI PN 
Sbjct: 404  IDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNE 463

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + FV ILSAC H G V+ G  +F+ MV+ Y I P  +HYGCM+DLLGRAG  +EAE  ++
Sbjct: 464  ITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQ 523

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
            +M   P+  IWG+LL ACR H  +  G+     L ELEP +   Y L  ++ A +G+ ++
Sbjct: 524  NMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDD 583

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
              ++R  + ++ M+   G + +EV++ VHEF+ GD  H ++ +IY+ML E++ +L+  GF
Sbjct: 584  VARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGF 643

Query: 901  LVEKEEL 921
            + +  E+
Sbjct: 644  VADTSEV 650



 Score =  119 bits (298), Expect = 2e-24
 Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 3/204 (1%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL LF +M  + V  NEST+VSVLSACA+  ALD G  + ++++  G   +++ +  AL
Sbjct: 244 EALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLC-SNLKLVNAL 302

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +DMY+K G L ++ E+F  M  RDV++W  MI G+      ++   LF +M+A G+ P  
Sbjct: 303 IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362

Query: 361 VIFVAILSACSHVGYVEEG---HHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEE 531
           + F++IL +C+H+G ++ G   H Y N    S     S      ++DL  + G +  A +
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS----LIDLYAKCGNIVAARQ 418

Query: 532 FIESMPENPNSVIWGALLAACRTH 603
             + M +  +   W A++     H
Sbjct: 419 VFDGM-KIKSLASWNAMICGLAMH 441



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 31/245 (12%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           AL  F  M+ SGV  N  T   +L +CA+L +  +G+ IHA+V + G   + V + T+L+
Sbjct: 113 ALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFV-SDVFIHTSLI 171

Query: 184 DMYAKSGSLGSSY-------------------------------EVFRKMGVRDVVTWGA 270
           +MYA+SG + ++                                ++F +M V+DVV+W A
Sbjct: 172 NMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNA 231

Query: 271 MISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESY 450
           MI+G+A  G++++   LF  M    + PN    V++LSAC+    ++ G+      +E  
Sbjct: 232 MIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNS-MRSWIEDR 290

Query: 451 VIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRA 630
            +  +++    ++D+  + G LQ A E  + M E  + + W  ++         +     
Sbjct: 291 GLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER-DVISWNVMIGGYTHMCSYKEALAL 349

Query: 631 FRHLI 645
           FR ++
Sbjct: 350 FREML 354


>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella bursa-pastoris]
          Length = 706

 Score =  288 bits (736), Expect = 3e-75
 Identities = 143/308 (46%), Positives = 204/308 (66%), Gaps = 1/308 (0%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVN-VGTA 177
            EAL LF+EM+ SG S NE T++S+L ACA LGA+D GRWIH Y+D+   G ++ + + T+
Sbjct: 319  EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 178  LVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPN 357
            L+DMYAK G + ++ +VF  M  R + +W AMI GFAMHG+A   F +F++M  DGI P+
Sbjct: 379  LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438

Query: 358  SVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFI 537
             + FV +LSACSH G ++ G H F  M E Y I P +EHYGCM+DLLG +G  +EAEE I
Sbjct: 439  DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 538  ESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQE 717
             SM  +P+ VIW +LL AC+ H ++  G+   ++LI++EP +   Y L  ++ AT+G   
Sbjct: 499  NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWN 558

Query: 718  NALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAG 897
               K R L+ +K M+   G S +E++  VHEF+ GD  H + REIY ML E+E  LE+AG
Sbjct: 559  EVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAG 618

Query: 898  FLVEKEEL 921
            F+ +  E+
Sbjct: 619  FVPDTSEV 626



 Score =  120 bits (300), Expect = 1e-24
 Identities = 65/204 (31%), Positives = 119/204 (58%), Gaps = 3/204 (1%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
           EAL LF+EMM + V  +EST+V+VLSACA+  +++ GR +H+++D  G G +++ +  AL
Sbjct: 218 EALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFG-SNLKIVNAL 276

Query: 181 VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
           +D+Y K G + ++  +F  +  +DV++W  +I G+      ++   LF +M+  G  PN 
Sbjct: 277 IDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNE 336

Query: 361 VIFVAILSACSHVGYVEEG---HHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEE 531
           V  ++IL AC+H+G ++ G   H Y +  ++  V  PS      ++D+  + G ++ A++
Sbjct: 337 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKG-VSNPSSLRTS-LIDMYAKCGDIEAAQQ 394

Query: 532 FIESMPENPNSVIWGALLAACRTH 603
             +SM  N +   W A++     H
Sbjct: 395 VFDSM-LNRSLSSWNAMIFGFAMH 417



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 30/233 (12%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSG------------- 144
           AL L+  M+  G+  N  T   +L ACA+  A  +G+ IH +V + G             
Sbjct: 87  ALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIA 146

Query: 145 -----------------AGRTSVNVGTALVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAM 273
                            +    V   TAL+  YA +G + S+ ++F ++ V+DVV+W A+
Sbjct: 147 MYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNAL 206

Query: 274 ISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESYV 453
           ISG+A  G  ++  +LF +M+   + P+    V +LSAC+    +E G    +  ++ + 
Sbjct: 207 ISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS-WIDDHG 265

Query: 454 IKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDL 612
              +++    ++DL  + G ++ A    E +    + + W  L+    TH +L
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETASGLFEGL-SYKDVISWNTLIGG-YTHMNL 316


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550343649|gb|EEE78954.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 543

 Score =  287 bits (735), Expect = 4e-75
 Identities = 139/310 (44%), Positives = 204/310 (65%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTAL 180
            +A++LFR M +  V  +E  ++  L+ACARLGAL+ G WI  Y+DR G   T++ +  AL
Sbjct: 232  DAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNAL 291

Query: 181  VDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNS 360
            +DMYAKSG + S+ +VF  M  + ++TW  MI+G A+HG   +  ++F++M    + PN 
Sbjct: 292  IDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPND 351

Query: 361  VIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIE 540
            + F+AILSACSHVG V+ G  YFN M+  Y I+P +EHYGCM+DLLGRAG L+EA+  + 
Sbjct: 352  ITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLA 411

Query: 541  SMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQEN 720
             MP  PN+VIWG+LLAAC TH D   G+ A +HL+ELEP +   Y L  ++ A+ G    
Sbjct: 412  QMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNE 471

Query: 721  ALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAGF 900
            +  +RK++ +  ++   G S +EVN+ VHEF+AG+ISH +   I ++L +I R+L  +  
Sbjct: 472  SRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQEVLSKINRQLGLSQH 531

Query: 901  LVEKEELSLL 930
              EKE  +LL
Sbjct: 532  F-EKESGALL 540



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 47/235 (20%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           ++ L+  + ++G+  +  +    L A  R  ++  GR +H+   R G   + ++V TA V
Sbjct: 97  SIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGL-HSDLHVLTAFV 155

Query: 184 DMY-----------------------------------AKSGSLGSSYEVFRKMGVRDVV 258
            MY                                   AK G L ++ ++F +M  R+V+
Sbjct: 156 QMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVI 215

Query: 259 TWGAMISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLM 438
           +W A+I+G+A   +      LF +M  + + P+ +  +  L+AC+ +G +E G    + +
Sbjct: 216 SWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYI 275

Query: 439 VESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTH 603
               ++  ++     ++D+  ++G ++ A +  E+M  +   + W  ++A    H
Sbjct: 276 DRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENM-NHKTIITWTTMIAGLALH 329


>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550317719|gb|EEF02800.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 736

 Score =  287 bits (735), Expect = 4e-75
 Identities = 135/308 (43%), Positives = 196/308 (63%), Gaps = 1/308 (0%)
 Frame = +1

Query: 1    EALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAG-RTSVNVGTA 177
            EAL LFR MM S +  N+ T +S+L ACA LGALD G+W+HAYVD++    + +V + T+
Sbjct: 345  EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404

Query: 178  LVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPN 357
            L+DMYAK G L ++  +F  M  + + TW AMISGFAMHG  +    LF++M ++G  P+
Sbjct: 405  LIDMYAKCGDLAAAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464

Query: 358  SVIFVAILSACSHVGYVEEGHHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAEEFI 537
             + FV +L+AC H G +  G  YF+ M++ Y + P + HYGCM+DL GRAG   EAE  +
Sbjct: 465  DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524

Query: 538  ESMPENPNSVIWGALLAACRTHKDLRRGKRAFRHLIELEPCSGDRYKLAGHVLATSGEQE 717
            ++M   P+  IW +LL ACR H+ +   +   +HL ELEP +   Y L  ++ A +G  E
Sbjct: 525  KNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWE 584

Query: 718  NALKLRKLIKEKEMETTCGSSFVEVNDTVHEFVAGDISHGKAREIYKMLGEIERRLEKAG 897
            +  K+R  + +  M+   G S +EV+  VHEF+ GD  H ++ EIYKML EI+ RLEKAG
Sbjct: 585  DVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644

Query: 898  FLVEKEEL 921
            F+ +  E+
Sbjct: 645  FVPDTSEV 652



 Score =  112 bits (279), Expect = 3e-22
 Identities = 63/205 (30%), Positives = 116/205 (56%), Gaps = 4/205 (1%)
 Frame = +1

Query: 1   EALSLFREMMVSGVSMNESTLVSVLSACARLGA-LDQGRWIHAYVDRSGAGRTSVNVGTA 177
           EA++ F EM  + V+ N ST++SVLSACA+ G+ L  G W+ ++++  G G +++ +   
Sbjct: 243 EAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLG-SNIRLVNG 301

Query: 178 LVDMYAKSGSLGSSYEVFRKMGVRDVVTWGAMISGFAMHGKAEKCFQLFNQMVADGIHPN 357
           L+DMY K G L  +  +F K+  ++VV+W  MI G+      ++   LF +M+   I PN
Sbjct: 302 LIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPN 361

Query: 358 SVIFVAILSACSHVGYVEEG---HHYFNLMVESYVIKPSMEHYGCMVDLLGRAGRLQEAE 528
            V F++IL AC+++G ++ G   H Y +  ++S  +K ++  +  ++D+  + G L  A+
Sbjct: 362 DVTFLSILPACANLGALDLGKWVHAYVDKNMKS--MKNTVALWTSLIDMYAKCGDLAAAK 419

Query: 529 EFIESMPENPNSVIWGALLAACRTH 603
              + M    +   W A+++    H
Sbjct: 420 RIFDCM-NTKSLATWNAMISGFAMH 443



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
 Frame = +1

Query: 4   ALSLFREMMVSGVSMNESTLVSVLSACARLGALDQGRWIHAYVDRSGAGRTSVNVGTALV 183
           AL  +  M+ SG   NE T  S+  +C ++    +G+ +HA+V + G    +  V T+L+
Sbjct: 112 ALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF-VHTSLI 170

Query: 184 DMYAKSGSL-------------------------------GSSYEVFRKMGVRDVVTWGA 270
           +MYA++G L                                 + E+F ++ VRDVV+W A
Sbjct: 171 NMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNA 230

Query: 271 MISGFAMHGKAEKCFQLFNQMVADGIHPNSVIFVAILSACSHVGYVEEGHHYFNLMVESY 450
           MISG+A  G+ E+    F +M    + PN    +++LSAC+  G   +  ++    +E  
Sbjct: 231 MISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR 290

Query: 451 VIKPSMEHYGCMVDLLGRAGRLQEAEEFIESMPENPNSVIWGALLAACRTHKDLRRGKRA 630
            +  ++     ++D+  + G L+EA    E + ++ N V W  ++         +     
Sbjct: 291 GLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI-QDKNVVSWNVMIGGYTHMSCYKEALGL 349

Query: 631 FRHLIE 648
           FR +++
Sbjct: 350 FRRMMQ 355