BLASTX nr result

ID: Cocculus23_contig00022163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00022163
         (236 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325007.2| hypothetical protein POPTR_0018s09050g [Popu...    64   2e-08
ref|XP_007204677.1| hypothetical protein PRUPE_ppa000309mg [Prun...    62   6e-08
ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily prot...    59   9e-07
ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citr...    58   1e-06
ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   2e-06
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]    57   2e-06
ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein lig...    56   5e-06

>ref|XP_002325007.2| hypothetical protein POPTR_0018s09050g [Populus trichocarpa]
           gi|550318363|gb|EEF03572.2| hypothetical protein
           POPTR_0018s09050g [Populus trichocarpa]
          Length = 266

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
 Frame = -2

Query: 235 FEELFL---LSVLHWLNDQRFEILLTQS------SKDLSIGK*IYGEAIGGLGSNVGEDQ 83
           FEELFL   L VL W N+QR  IL + +      S + SIG          L S +  DQ
Sbjct: 131 FEELFLVHLLPVLRWFNEQRSRILSSLTLDWGYDSDENSIGDVSIVVPCTKLLSKMSGDQ 190

Query: 82  ATELKELGRLYEEVLDENCRIFVGYFK 2
           A ELKEL  +YEEV+DENC++F  YFK
Sbjct: 191 ALELKELESIYEEVIDENCKVFAKYFK 217


>ref|XP_007204677.1| hypothetical protein PRUPE_ppa000309mg [Prunus persica]
           gi|462400208|gb|EMJ05876.1| hypothetical protein
           PRUPE_ppa000309mg [Prunus persica]
          Length = 1300

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
 Frame = -2

Query: 235 FEELFL---LSVLHWLNDQRFEILLTQSSK------DLSIGK*IYGEAIGGLGSNVGEDQ 83
           FEELFL   L VLHW N+QR +IL T S+       D SI             S +   Q
Sbjct: 131 FEELFLVHLLPVLHWYNEQRTQILPTLSTNVSYENDDCSISDMSIVFPCSKSLSKMSGGQ 190

Query: 82  ATELKELGRLYEEVLDENCRIFVGYFK 2
            +ELKEL   YE+VLDENCR+F  YFK
Sbjct: 191 TSELKELESNYEKVLDENCRVFSNYFK 217


>ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           gi|508783476|gb|EOY30732.1| Transducin/WD40 repeat-like
           superfamily protein [Theobroma cacao]
          Length = 1332

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
 Frame = -2

Query: 235 FEELFL---LSVLHWLNDQRFEILLTQS------SKDLSIGK*IYGEAIGGLGSNVGEDQ 83
           FE+LFL   L VL   N+QR  IL + S      + D SI           L S +  DQ
Sbjct: 133 FEDLFLVHFLPVLQRFNEQRSTILSSLSPNVNHDADDYSICDVSVVVPCSKLLSKMSGDQ 192

Query: 82  ATELKELGRLYEEVLDENCRIFVGYFK 2
           A ELKEL R YEEVLDENCR+ V YFK
Sbjct: 193 ALELKELERNYEEVLDENCRVLVKYFK 219


>ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citrus clementina]
           gi|557554431|gb|ESR64445.1| hypothetical protein
           CICLE_v10007255mg [Citrus clementina]
          Length = 1380

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 18/96 (18%)
 Frame = -2

Query: 235 FEELFL---LSVLHWLNDQRFEILLTQSSK---------DLSIGK*IYGEAIG------G 110
           FEELFL   L VL+W N+QR  IL +  S          D S  +    + +        
Sbjct: 139 FEELFLVHLLPVLYWHNEQRSSILSSSLSSLQSSYDHDDDESNDENSMSDDVSVVVPCAK 198

Query: 109 LGSNVGEDQATELKELGRLYEEVLDENCRIFVGYFK 2
           L S +   QA+ELKEL R YEE+LDENCR+F  YFK
Sbjct: 199 LLSKMSGSQASELKELERNYEELLDENCRVFASYFK 234


>ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
           lycopersicum]
          Length = 1384

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
 Frame = -2

Query: 235 FEELFLLS---VLHWLNDQRFEI--LLTQSSKDLSIGK*IYGEAIGGLGSNVGEDQATEL 71
           FE+LFL+    +LHW N QR  I  LL++ +K LS                +  +QA++L
Sbjct: 239 FEQLFLIHFIPILHWYNHQRSTIMPLLSEPTKSLS---------------TMSREQASQL 283

Query: 70  KELGRLYEEVLDENCRIFVGYF 5
           K+L   YEE+LDENC++F  YF
Sbjct: 284 KDLENEYEEILDENCKVFATYF 305


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
 Frame = -2

Query: 235 FEELFL---LSVLHWLNDQRFEILLTQSSKDL---SIGK*IYGEAIGGLG----SNVGED 86
           FEE FL   L VL    DQR  IL + SSK+L   S  +  + E++   G    S +   
Sbjct: 431 FEEFFLIHLLPVLQSFKDQRSRILSSLSSKNLGYDSDKRSRFEESVVVSGTRLLSKMSGG 490

Query: 85  QATELKELGRLYEEVLDENCRIFVGYFK 2
           Q +ELK L R YEEVLDENCR+ VGYF+
Sbjct: 491 QTSELKXLERDYEEVLDENCRLLVGYFR 518


>ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
           tuberosum]
          Length = 1284

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
 Frame = -2

Query: 235 FEELFLLS---VLHWLNDQRFEIL-----LTQSSKDLSIGK*IYGEAIGGLGSNVGEDQA 80
           FE+LFL+    +LHW N QR  I+     ++  +K LS                +  +QA
Sbjct: 115 FEQLFLIHFIPILHWYNHQRSTIMPLFNAVSAPTKSLS---------------TISREQA 159

Query: 79  TELKELGRLYEEVLDENCRIFVGYFK 2
           ++LK+L   YEE+LDENCR+F  YFK
Sbjct: 160 SQLKDLENEYEEILDENCRVFSRYFK 185


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