BLASTX nr result
ID: Cocculus23_contig00021983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00021983
(611 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008963385.1| RNA polymerase beta (chloroplast) [Sedum sar... 310 3e-82
gb|AHE41634.1| RNA polymerase beta' subunit protein, partial (ch... 309 4e-82
gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (ch... 309 5e-82
gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedice... 309 5e-82
ref|XP_004174097.1| PREDICTED: DNA-directed RNA polymerase subun... 309 5e-82
gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (ch... 308 8e-82
gb|AHE41638.1| RNA polymerase beta' subunit protein, partial (ch... 306 2e-81
prf||1211235Q rpoC-like ORF 548 306 3e-81
gb|AHE41644.1| RNA polymerase beta' subunit protein, partial (ch... 306 4e-81
gb|AHE41636.1| RNA polymerase beta' subunit protein, partial (ch... 306 4e-81
gb|ADD31165.1| RNA polymerase beta' subunit protein [Ilex cornuta] 305 7e-81
ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subun... 305 9e-81
ref|YP_008592924.1| DNA-directed RNA polymerase beta' subunit (c... 305 9e-81
ref|YP_008592837.1| DNA-directed RNA polymerase beta' subunit (c... 305 9e-81
ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (c... 305 9e-81
gb|AHE41637.1| RNA polymerase beta' subunit protein, partial (ch... 304 1e-80
ref|YP_008963471.1| RNA polymerase beta (chloroplast) [Penthorum... 303 2e-80
gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (ch... 303 3e-80
ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (c... 303 3e-80
gb|AHE41645.1| RNA polymerase beta' subunit protein, partial (ch... 303 3e-80
>ref|YP_008963385.1| RNA polymerase beta (chloroplast) [Sedum sarmentosum]
gi|402797520|gb|AFQ99052.1| RNA polymerase beta
(chloroplast) [Sedum sarmentosum]
Length = 552
Score = 310 bits (793), Expect = 3e-82
Identities = 155/197 (78%), Positives = 163/197 (82%)
Frame = +1
Query: 19 RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIA 198
+GG+P G+YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+
Sbjct: 4 KGGDPTGSYPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIS 63
Query: 199 TGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKH 378
TGA AIREQLADLDLRLIIDYSLVEWKELGEE TGNEW+DRKIGRR DFLVRRMELAKH
Sbjct: 64 TGAGAIREQLADLDLRLIIDYSLVEWKELGEETLTGNEWQDRKIGRRNDFLVRRMELAKH 123
Query: 379 FIRTNVEPERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXX 558
F+RTN+EPE MV IIQIDGGKLMSSDINELYRRVIY
Sbjct: 124 FLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTRS 183
Query: 559 XXXPGELVMCQEKLVQE 609
PGELVMCQEKLVQE
Sbjct: 184 VSTPGELVMCQEKLVQE 200
>gb|AHE41634.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Hamamelis mollis]
Length = 639
Score = 309 bits (792), Expect = 4e-82
Identities = 155/189 (82%), Positives = 160/189 (84%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA+AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAAAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312
>gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Disanthus cercidifolius subsp. longipes]
Length = 621
Score = 309 bits (791), Expect = 5e-82
Identities = 155/189 (82%), Positives = 159/189 (84%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 108 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 167
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 168 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 227
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 228 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 287
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 288 MCQEKLVQE 296
>gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedicellaris]
Length = 718
Score = 309 bits (791), Expect = 5e-82
Identities = 154/202 (76%), Positives = 165/202 (81%)
Frame = +1
Query: 4 HVRF*RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFR 183
HVRF RGG PI +YPNFSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFR
Sbjct: 167 HVRFRRGGAPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFR 226
Query: 184 NREIATGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRM 363
NREI+TGA AIREQLADLDLR++I+ SL+EWK+LGEE TGNEWEDRK+GRRKDFLVRRM
Sbjct: 227 NREISTGAGAIREQLADLDLRIVIENSLLEWKDLGEEEHTGNEWEDRKVGRRKDFLVRRM 286
Query: 364 ELAKHFIRTNVEPERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXX 543
ELAKHF+RTN+EPE MV IIQIDGGKLMSSDINELYRRVIY
Sbjct: 287 ELAKHFLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTD 346
Query: 544 XXXXXXXXPGELVMCQEKLVQE 609
PGELVMCQEKLVQE
Sbjct: 347 LLTTSRSTPGELVMCQEKLVQE 368
>ref|XP_004174097.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like, partial
[Cucumis sativus]
Length = 471
Score = 309 bits (791), Expect = 5e-82
Identities = 155/194 (79%), Positives = 161/194 (82%)
Frame = +1
Query: 28 NPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGA 207
+PI +YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA
Sbjct: 3 DPIVSYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGA 62
Query: 208 SAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIR 387
AIREQLADLDLRLIIDYSLVEWKELGEEGP GNEWEDRK+GRRKDFLVRRMELAKHFIR
Sbjct: 63 GAIREQLADLDLRLIIDYSLVEWKELGEEGPAGNEWEDRKVGRRKDFLVRRMELAKHFIR 122
Query: 388 TNVEPERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXX 567
TN+EPE MV IIQIDGGKLMSSDINELYRRVIY
Sbjct: 123 TNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRST 182
Query: 568 PGELVMCQEKLVQE 609
PGELVMCQEKLVQE
Sbjct: 183 PGELVMCQEKLVQE 196
>gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Rhodoleia championii]
Length = 639
Score = 308 bits (789), Expect = 8e-82
Identities = 155/189 (82%), Positives = 159/189 (84%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGASAIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGASAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312
>gb|AHE41638.1| RNA polymerase beta' subunit protein, partial (chloroplast) [Itea
chinensis]
Length = 639
Score = 306 bits (785), Expect = 2e-81
Identities = 154/189 (81%), Positives = 158/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRGLFEYEI SWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGLFEYEIPSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLKDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312
>prf||1211235Q rpoC-like ORF 548
Length = 548
Score = 306 bits (784), Expect = 3e-81
Identities = 153/197 (77%), Positives = 163/197 (82%)
Frame = +1
Query: 19 RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIA 198
RGG+PI +YPNFSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+
Sbjct: 1 RGGDPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIS 60
Query: 199 TGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKH 378
TGA AIREQLADLDLR+II+ SLVEW+ELGEEG TGNEWEDRK+GRRKDFLVRR+ELAKH
Sbjct: 61 TGAGAIREQLADLDLRIIIENSLVEWEELGEEGHTGNEWEDRKVGRRKDFLVRRVELAKH 120
Query: 379 FIRTNVEPERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXX 558
FIRTN+EPE MV IIQIDGGKLMSSDINELYRRVIY
Sbjct: 121 FIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTS 180
Query: 559 XXXPGELVMCQEKLVQE 609
PGELVMCQEKLVQE
Sbjct: 181 RSTPGELVMCQEKLVQE 197
>gb|AHE41644.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Gunnera manicata]
Length = 637
Score = 306 bits (783), Expect = 4e-81
Identities = 154/189 (81%), Positives = 158/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QL+DLDLR+IIDYSLVEWKELGEEG TGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP
Sbjct: 184 QLSDLDLRIIIDYSLVEWKELGEEGTTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
ERMV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 ERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312
>gb|AHE41636.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Saxifraga stolonifera]
Length = 639
Score = 306 bits (783), Expect = 4e-81
Identities = 154/189 (81%), Positives = 158/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
Y NFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YRNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLNDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKL+QE
Sbjct: 304 MCQEKLIQE 312
>gb|ADD31165.1| RNA polymerase beta' subunit protein [Ilex cornuta]
Length = 694
Score = 305 bits (781), Expect = 7e-81
Identities = 154/188 (81%), Positives = 158/188 (84%)
Frame = +1
Query: 46 PNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIREQ 225
PNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIREQ
Sbjct: 152 PNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQ 211
Query: 226 LADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPE 405
LADLDLR+IIDYSLVEWKELGEEG TGNEWEDRK+GRRKDFLVRRMELAKHFIRTN+EPE
Sbjct: 212 LADLDLRIIIDYSLVEWKELGEEGFTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPE 271
Query: 406 RMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELVM 585
RMV IIQIDGGKLMSSDINELYRRVIY PGELVM
Sbjct: 272 RMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVM 331
Query: 586 CQEKLVQE 609
CQEKLVQE
Sbjct: 332 CQEKLVQE 339
>ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like [Solanum
tuberosum]
Length = 581
Score = 305 bits (780), Expect = 9e-81
Identities = 152/197 (77%), Positives = 163/197 (82%)
Frame = +1
Query: 19 RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIA 198
+GG+PI +YPNFSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+
Sbjct: 34 QGGDPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIS 93
Query: 199 TGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKH 378
TGA AIREQLADLDLR+II+ SLVEW+ELGEEG TGNEWEDRK+GRRKDFLVRR+ELAKH
Sbjct: 94 TGAGAIREQLADLDLRIIIENSLVEWEELGEEGHTGNEWEDRKVGRRKDFLVRRVELAKH 153
Query: 379 FIRTNVEPERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXX 558
FIRTN+EPE MV IIQIDGGKLMSSDINELYRRVIY
Sbjct: 154 FIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTS 213
Query: 559 XXXPGELVMCQEKLVQE 609
PGELVMCQEKLVQE
Sbjct: 214 RSTPGELVMCQEKLVQE 230
>ref|YP_008592924.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
impressinervis] gi|537362585|gb|AGU44391.1| DNA-directed
RNA polymerase beta' subunit (chloroplast) [Camellia
impressinervis]
Length = 686
Score = 305 bits (780), Expect = 9e-81
Identities = 152/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTNLLTTSRSTPGELV 325
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 326 MCQEKLVQE 334
>ref|YP_008592837.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
danzaiensis] gi|552546184|ref|YP_008593013.1|
DNA-directed RNA polymerase beta' subunit (chloroplast)
[Camellia pitardii] gi|537362497|gb|AGU44304.1|
DNA-directed RNA polymerase beta' subunit (chloroplast)
[Camellia danzaiensis] gi|537362765|gb|AGU44569.1|
DNA-directed RNA polymerase beta' subunit (chloroplast)
[Camellia pitardii]
Length = 686
Score = 305 bits (780), Expect = 9e-81
Identities = 152/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 326 MCQEKLVQE 334
>ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
cuspidata] gi|537362407|gb|AGU44215.1| DNA-directed RNA
polymerase beta' subunit (chloroplast) [Camellia
cuspidata]
Length = 686
Score = 305 bits (780), Expect = 9e-81
Identities = 152/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 326 MCQEKLVQE 334
>gb|AHE41637.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Daphniphyllum oldhamii]
Length = 639
Score = 304 bits (779), Expect = 1e-80
Identities = 153/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTT GFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTPGFDTFRNREISTGAGAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLGLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312
>ref|YP_008963471.1| RNA polymerase beta (chloroplast) [Penthorum chinense]
gi|403226772|gb|AFR25651.1| RNA polymerase beta
(chloroplast) [Penthorum chinense]
Length = 686
Score = 303 bits (777), Expect = 2e-80
Identities = 153/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 205
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QL+DLDLRLIIDYSLVEWKELGEEG GNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLSDLDLRLIIDYSLVEWKELGEEGTAGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 326 MCQEKLVQE 334
>gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Philadelphus coronarius]
Length = 639
Score = 303 bits (776), Expect = 3e-80
Identities = 153/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREIATGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGAGAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRR+DFLVRRMELAK FIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRRDFLVRRMELAKSFIRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312
>ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
yunnanensis] gi|537362855|gb|AGU44658.1| DNA-directed
RNA polymerase beta' subunit (chloroplast) [Camellia
yunnanensis]
Length = 686
Score = 303 bits (776), Expect = 3e-80
Identities = 151/189 (79%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
+ MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 266 KWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 326 MCQEKLVQE 334
>gb|AHE41645.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Kalanchoe laciniata]
Length = 639
Score = 303 bits (775), Expect = 3e-80
Identities = 153/189 (80%), Positives = 157/189 (83%)
Frame = +1
Query: 43 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 222
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 223 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 402
QLADLDLRLIIDYSLVEWKELGEE TGNEWEDRKIGRRKDFLVRRMELAKHF+RTN+EP
Sbjct: 184 QLADLDLRLIIDYSLVEWKELGEEALTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEP 243
Query: 403 ERMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGELV 582
E MV IIQIDGGKLMSSDINELYRRVIY PGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSVSTPGELV 303
Query: 583 MCQEKLVQE 609
MCQEKLVQE
Sbjct: 304 MCQEKLVQE 312