BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00020886
         (1621 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   195   4e-47
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   189   2e-45
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         168   7e-39
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         168   7e-39
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   168   7e-39
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...   165   5e-38
ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Popu...   161   9e-37
ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus]        159   3e-36
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            156   3e-35
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   156   3e-35
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   156   3e-35
ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer ar...   140   2e-30
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   137   2e-29
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   133   3e-28
ref|XP_006408598.1| hypothetical protein EUTSA_v10002258mg, part...   126   2e-26
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr...   117   1e-23
gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]            107   1e-20
ref|XP_006403348.1| hypothetical protein EUTSA_v10003399mg, part...   107   2e-20
gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                      107   2e-20
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                      107   2e-20

>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  195 bits (496), Expect = 4e-47
 Identities = 96/165 (58%), Positives = 118/165 (71%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            RILQTDASD YWGA+LIEE    + YCGHASG FK AE+HYHT +KE LAV+ GI+KF+F
Sbjct: 971  RILQTDASDHYWGAVLIEEINGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDF 1030

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
             L   +FE+QMDNSSFPR+LEFKNK+ PDPQ LRLK+WFSR+ F VKHI GN+N++ D L
Sbjct: 1031 HLRGYQFEVQMDNSSFPRILEFKNKMPPDPQTLRLKDWFSRYDFTVKHIKGNQNLIPDLL 1090

Query: 363  SR-KNPLSMITTTRLLPLIAVIHPITISSQYRPLFPPAAGPFSSP 494
            SR    + +IT   + PLI ++ P+   S     FPP      SP
Sbjct: 1091 SRPMKSIQVITKKHVFPLIFMVKPLPAHSSTIKDFPPRVDSSFSP 1135


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  189 bits (481), Expect = 2e-45
 Identities = 93/165 (56%), Positives = 116/165 (70%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            RILQTDASD YWGA+LIEE    ++YCGHASG FK AE+HYHT +KE LAV+ GI+KF+F
Sbjct: 1638 RILQTDASDHYWGAVLIEEINGVKYYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDF 1697

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
             L   +FE+QMDNSSFPR+LEFKNK+ PDPQ LRLK+WFSR+ F VKHI GN+N++ D L
Sbjct: 1698 HLRGYQFEVQMDNSSFPRILEFKNKMPPDPQTLRLKDWFSRYDFTVKHIKGNQNLIPDLL 1757

Query: 363  SR-KNPLSMITTTRLLPLIAVIHPITISSQYRPLFPPAAGPFSSP 494
            SR   P+ ++T      LI ++  +         FPP      SP
Sbjct: 1758 SRPMKPIQIVTKKHTFLLILMLKSLPTHGSTIKDFPPGVELSFSP 1802


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  168 bits (425), Expect = 7e-39
 Identities = 80/157 (50%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            +ILQTDASD YW A+L+EE    + +C HASG FK +E++YH ++KEIL V+ GIKKFEF
Sbjct: 1526 KILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEF 1585

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
             L S  F I MDNSSFPR+ +FKNK+L D QLL LK WF+++ F V+HI GN+N++ DFL
Sbjct: 1586 HLISHTFLINMDNSSFPRIFDFKNKLLLDKQLLNLKTWFAKYDFTVQHIKGNQNLIPDFL 1645

Query: 363  SRK--NPLSMITTTRLLPLIAVIHPITISSQYRPLFP 467
            +R   N  S+I++ + +P+IA+   +   +  +  FP
Sbjct: 1646 TRPAINKPSLISSIQTIPVIALNRQLPFKALTQRHFP 1682


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  168 bits (425), Expect = 7e-39
 Identities = 80/157 (50%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            +ILQTDASD YW A+L+EE    + +C HASG FK +E++YH ++KEIL V+ GIKKFEF
Sbjct: 1624 KILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEF 1683

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
             L S  F I MDNSSFPR+ +FKNK+L D QLL LK WF+++ F V+HI GN+N++ DFL
Sbjct: 1684 HLISHTFLINMDNSSFPRIFDFKNKLLLDKQLLNLKTWFAKYDFTVQHIKGNQNLIPDFL 1743

Query: 363  SRK--NPLSMITTTRLLPLIAVIHPITISSQYRPLFP 467
            +R   N  S+I++ + +P+IA+   +   +  +  FP
Sbjct: 1744 TRPAINKPSLISSIQTIPVIALNRQLPFKALTQRHFP 1780


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  168 bits (425), Expect = 7e-39
 Identities = 80/157 (50%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            +ILQTDASD YW A+L+EE    + +C HASG FK +E++YH ++KEIL V+ GIKKFEF
Sbjct: 1637 KILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEF 1696

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
             L S  F I MDNSSFPR+ +FKNK+L D QLL LK WF+++ F V+HI GN+N++ DFL
Sbjct: 1697 HLISHTFLINMDNSSFPRIFDFKNKLLLDKQLLNLKTWFAKYDFTVQHIKGNQNLIPDFL 1756

Query: 363  SRK--NPLSMITTTRLLPLIAVIHPITISSQYRPLFP 467
            +R   N  S+I++ + +P+IA+   +   +  +  FP
Sbjct: 1757 TRPAINKPSLISSIQTIPVIALNRQLPFKALTQRHFP 1793


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score =  165 bits (418), Expect = 5e-38
 Identities = 83/158 (52%), Positives = 108/158 (68%), Gaps = 6/158 (3%)
 Frame = +3

Query: 3   RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
           RILQTDASD YWGAIL+EE+ NH+  CG+ SG FK +E+HYH+ FKEILAV+ GI+KF+ 
Sbjct: 291 RILQTDASDEYWGAILLEERDNHRQICGYKSGHFKDSEKHYHSTFKEILAVKRGIEKFQI 350

Query: 183 FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
            L    F+I+MD SSFPR+L FK K +P+ QLLR   WFSRF F+VKHI G  N L D L
Sbjct: 351 HLIGHHFQIEMDMSSFPRMLHFKQKTIPNSQLLRWAXWFSRFDFQVKHIKGKNNTLPDML 410

Query: 363 SR------KNPLSMITTTRLLPLIAVIHPITISSQYRP 458
           +R      KN +S IT+   +P+I ++   +    + P
Sbjct: 411 TRPPLRKFKNTMSYITSP--VPIITMMEDYSTFQFFPP 446


>ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Populus trichocarpa]
           gi|550349213|gb|EEE85243.2| hypothetical protein
           POPTR_0001s38890g [Populus trichocarpa]
          Length = 309

 Score =  161 bits (407), Expect = 9e-37
 Identities = 78/140 (55%), Positives = 100/140 (71%)
 Frame = +3

Query: 3   RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
           RILQTD SD YW  +L+E+K  H+  CG+ SGSFK +E HYH+ FKEILAV+ GI+KFEF
Sbjct: 24  RILQTDVSDKYWSDVLLEDKNGHRHICGYKSGSFKESETHYHSTFKEILAVKYGIQKFEF 83

Query: 183 FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
            L +  F + MD SSFP++L+FK K+LP PQLLRL EWF ++ F V+HI G KN++ D L
Sbjct: 84  HLVAYHFTVIMDCSSFPKMLQFKRKMLPHPQLLRLAEWFPKYTFTVEHIKGTKNLIPDML 143

Query: 363 SRKNPLSMITTTRLLPLIAV 422
           +R       T T LLPLI +
Sbjct: 144 TRPPK----TQTLLLPLILI 159


>ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus]
          Length = 124

 Score =  159 bits (402), Expect = 3e-36
 Identities = 72/121 (59%), Positives = 93/121 (76%)
 Frame = +3

Query: 6   ILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEFF 185
           ILQTDASD YW A+L+EE    + +C HASG FK +E++YH ++KEIL V+ GIKKFEF 
Sbjct: 1   ILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFH 60

Query: 186 LCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFLS 365
           L S  F I MDNSSFPR+ +FKNK+L D QLL LK WF+++ F V+HI GN+N++ DFL+
Sbjct: 61  LISHTFLINMDNSSFPRIFDFKNKLLLDKQLLNLKTWFAKYDFTVQHIKGNQNLIPDFLT 120

Query: 366 R 368
           R
Sbjct: 121 R 121


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  156 bits (394), Expect = 3e-35
 Identities = 72/127 (56%), Positives = 93/127 (73%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            +ILQTDASD YW A+L+EE    +  CG ASG FK +EQHYH+ FKEILAV+NGIKKF F
Sbjct: 1684 KILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNF 1743

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
            FL    F ++MD  +FP+++    KI+P+ QLLR  +WFS +QF+VKH+ G  N+LADFL
Sbjct: 1744 FLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKGKDNILADFL 1803

Query: 363  SRKNPLS 383
            SR +  S
Sbjct: 1804 SRPHEFS 1810


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  156 bits (394), Expect = 3e-35
 Identities = 72/127 (56%), Positives = 93/127 (73%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            +ILQTDASD YW A+L+EE    +  CG ASG FK +EQHYH+ FKEILAV+NGIKKF F
Sbjct: 1684 KILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNF 1743

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
            FL    F ++MD  +FP+++    KI+P+ QLLR  +WFS +QF+VKH+ G  N+LADFL
Sbjct: 1744 FLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKGKDNILADFL 1803

Query: 363  SRKNPLS 383
            SR +  S
Sbjct: 1804 SRPHEFS 1810


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  156 bits (394), Expect = 3e-35
 Identities = 72/127 (56%), Positives = 93/127 (73%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            +ILQTDASD YW A+L+EE    +  CG ASG FK +EQHYH+ FKEILAV+NGIKKF F
Sbjct: 1683 KILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNF 1742

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
            FL    F ++MD  +FP+++    KI+P+ QLLR  +WFS +QF+VKH+ G  N+LADFL
Sbjct: 1743 FLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKGKDNILADFL 1802

Query: 363  SRKNPLS 383
            SR +  S
Sbjct: 1803 SRPHEFS 1809


>ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 313

 Score =  140 bits (352), Expect = 2e-30
 Identities = 66/99 (66%), Positives = 78/99 (78%)
 Frame = +3

Query: 3   RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
           RILQTD SD YWGA+LIEE    + YCGHASG FK AE+HYHT +KE LAV+ GI+KF+F
Sbjct: 209 RILQTDVSDHYWGAVLIEEINGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDF 268

Query: 183 FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWF 299
            L   +FE+QMDNS FPR+LEFKNK+  DPQ LRLK+ F
Sbjct: 269 HLRGYQFEVQMDNSYFPRILEFKNKMSSDPQTLRLKDCF 307


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  137 bits (344), Expect = 2e-29
 Identities = 65/118 (55%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIE-EKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFE 179
            RILQTDASD YWGA+L+E ++   +  CG+ SG FK +E+HYH+ +KEILAV+ GI+KFE
Sbjct: 1530 RILQTDASDCYWGAVLLEKDEKGKRSICGYKSGVFKDSEKHYHSTYKEILAVKRGIEKFE 1589

Query: 180  FFLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLA 353
              +  Q F I+MD SSF ++++FK KILP  QLLR   WFS+++F VKHI G  N L+
Sbjct: 1590 SHIVGQHFLIEMDMSSFSKMIQFKQKILPQAQLLRWASWFSQWKFDVKHIKGKDNFLS 1647


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  133 bits (334), Expect = 3e-28
 Identities = 63/90 (70%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
           RILQTDA D YWGAILIEE    + YCGHASG FK AE+HYHT +KE LAV+ GI KF+F
Sbjct: 714 RILQTDAIDHYWGAILIEEIDGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIHKFDF 773

Query: 183 FLCSQEFEIQMDNSSFPRVLEFKNKILPDP 272
            L   +FE+QMDNSSFPR+LEFKNK+ PDP
Sbjct: 774 HLRGYQFEVQMDNSSFPRILEFKNKMPPDP 803


>ref|XP_006408598.1| hypothetical protein EUTSA_v10002258mg, partial [Eutrema
           salsugineum] gi|557109754|gb|ESQ50051.1| hypothetical
           protein EUTSA_v10002258mg, partial [Eutrema salsugineum]
          Length = 260

 Score =  126 bits (317), Expect = 2e-26
 Identities = 70/144 (48%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   RILQTDASDLYWGAILIEE-KANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFE 179
           RILQTDASD YWG +L+EE K   +  CG+ SG              EILAV+ GI+KFE
Sbjct: 2   RILQTDASDCYWGVVLLEEDKKGKRSICGYKSG--------------EILAVKRGIEKFE 47

Query: 180 FFLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADF 359
           F L  Q F I+MD SSFP++++FK KILP  QLLR   WFS+++F VKHI G  N L DF
Sbjct: 48  FHLVGQHFLIEMDMSSFPKMIQFKQKILPQAQLLRWASWFSQWKFDVKHIKGKYNFLPDF 107

Query: 360 LSRKNPLSMITTTRLLPLIAVIHP 431
           LSR    +    + ++P+I  + P
Sbjct: 108 LSR----TQRQISAVIPMIYTLTP 127


>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
            gi|557107078|gb|ESQ47393.1| hypothetical protein
            EUTSA_v10028344mg [Eutrema salsugineum]
          Length = 1508

 Score =  117 bits (293), Expect = 1e-23
 Identities = 64/143 (44%), Positives = 84/143 (58%)
 Frame = +3

Query: 3    RILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEF 182
            RILQTDASD YW                        +E+HYH+ +KEILAV+ GI+KF F
Sbjct: 1114 RILQTDASDCYW-----------------------DSEKHYHSTYKEILAVKRGIEKFGF 1150

Query: 183  FLCSQEFEIQMDNSSFPRVLEFKNKILPDPQLLRLKEWFSRFQFKVKHIPGNKNVLADFL 362
             L  Q F I+MD SSFP++++FK KILP  QLLR   WFS+++F VKH  G  N L DFL
Sbjct: 1151 HLVGQHFLIEMDMSSFPKMIQFKQKILPQAQLLRWASWFSQWKFDVKHNIGKDNFLPDFL 1210

Query: 363  SRKNPLSMITTTRLLPLIAVIHP 431
            SR    +    + ++P+I  + P
Sbjct: 1211 SR----TQRQISAVIPMICTLTP 1229


>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 814

 Score =  107 bits (268), Expect = 1e-20
 Identities = 56/124 (45%), Positives = 84/124 (67%), Gaps = 3/124 (2%)
 Frame = +3

Query: 6    ILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEFF 185
            I++TDAS+ +WG +L  + A+ +  C + SGSFKTAE++YH+  KE+LAV+N I KF  +
Sbjct: 689  IIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEKNYHSNEKELLAVKNTISKFSIY 748

Query: 186  LCSQEFEIQMDNSSFPRVLEFKNKILPD---PQLLRLKEWFSRFQFKVKHIPGNKNVLAD 356
            L   +F ++ DN +F   L  K KI  D    +L+R + WFSR+ F ++H+ G+KNVLAD
Sbjct: 749  LTPVKFLVRTDNRNFTYFL--KTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGSKNVLAD 806

Query: 357  FLSR 368
             L+R
Sbjct: 807  CLTR 810


>ref|XP_006403348.1| hypothetical protein EUTSA_v10003399mg, partial [Eutrema
           salsugineum] gi|557104461|gb|ESQ44801.1| hypothetical
           protein EUTSA_v10003399mg, partial [Eutrema salsugineum]
          Length = 187

 Score =  107 bits (266), Expect = 2e-20
 Identities = 50/89 (56%), Positives = 64/89 (71%)
 Frame = +3

Query: 39  GAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEFFLCSQEFEIQMD 218
           GAIL EE    +  CG+ SG FK +E HYH+ FKEILAV+  I+KFEF L   +F I+MD
Sbjct: 40  GAILFEEINGKRQICGYKSGRFKDSEMHYHSTFKEILAVKKAIEKFEFHLIGHKFRIEMD 99

Query: 219 NSSFPRVLEFKNKILPDPQLLRLKEWFSR 305
            SSFP++L+FK K++P  QLLR  EWFS+
Sbjct: 100 MSSFPKMLQFKQKMVPHQQLLRWSEWFSK 128


>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score =  107 bits (266), Expect = 2e-20
 Identities = 56/124 (45%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
 Frame = +3

Query: 6    ILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEFF 185
            I++TDAS+ +WG +L  + A+ +  C + SGSFKTAE++YH+  KE+LAV+N I KF  +
Sbjct: 683  IIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEKNYHSNEKELLAVKNTISKFSIY 742

Query: 186  LCSQEFEIQMDNSSFPRVLEFKNKILPD---PQLLRLKEWFSRFQFKVKHIPGNKNVLAD 356
            L   +F ++ DN +F   L  K KI  D    +L+R + WFSR+ F ++H+ G KNVLAD
Sbjct: 743  LTPVKFLVRTDNKNFTYFL--KTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGPKNVLAD 800

Query: 357  FLSR 368
             L+R
Sbjct: 801  CLTR 804


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score =  107 bits (266), Expect = 2e-20
 Identities = 55/124 (44%), Positives = 84/124 (67%), Gaps = 3/124 (2%)
 Frame = +3

Query: 6    ILQTDASDLYWGAILIEEKANHQFYCGHASGSFKTAEQHYHTVFKEILAVRNGIKKFEFF 185
            I++TDAS+ +WG +L  + A+ +  C + SGSFKTAE++YH+  K++LAV+N I KF  +
Sbjct: 681  IIETDASNDFWGGVLKAKTADKEAVCRYTSGSFKTAEKNYHSNEKKLLAVKNTISKFSIY 740

Query: 186  LCSQEFEIQMDNSSFPRVLEFKNKILPD---PQLLRLKEWFSRFQFKVKHIPGNKNVLAD 356
            L   +F ++ DN +F   L  K KI  D    +L+R + WFSR+ F ++H+ G+KNVLAD
Sbjct: 741  LTPVKFLVRTDNRNFTYFL--KTKISGDNKQGRLIRWQMWFSRYSFDIEHLEGSKNVLAD 798

Query: 357  FLSR 368
             L+R
Sbjct: 799  CLTR 802