BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00020826
         (588 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   125   7e-27
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        117   3e-24
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               117   3e-24
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                117   3e-24
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     117   3e-24
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  114   2e-23
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     112   1e-22
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   112   1e-22
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   110   2e-22
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   110   3e-22
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   110   3e-22
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              110   3e-22
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              110   3e-22
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              110   3e-22
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   109   5e-22
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              109   6e-22
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   109   6e-22
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           109   6e-22
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   108   8e-22
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   108   8e-22

>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  125 bits (315), Expect = 7e-27
 Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKERECYFCGEKGHMIRNCPK-------------------KGVPATTVESK 173
           RG +  R R K   C +C   GH I +C K                   +G  A   ++K
Sbjct: 166 RGRSKSRGRYKS--CKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNK 223

Query: 174 PIVDAEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCE 350
           P    +A+ +++        D W+LD+ C++++ P++ WFT+Y+P  GGN+LMGDN+ C+
Sbjct: 224 P----DAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCK 279

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + GVGT+QIK  DG IRTL  VRH+  ++RN+ISL  LD KGY +  G G L V KG
Sbjct: 280 VAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKG 336


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  117 bits (292), Expect = 3e-24
 Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 218 KSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVV 277

Query: 180 VD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCE 350
            D  ++A+ +++        D WILD+ C++++ P++ WF +Y+   GG +LMGD++ CE
Sbjct: 278 TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCE 337

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 338 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 394


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  117 bits (292), Expect = 3e-24
 Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 35  KSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVV 94

Query: 180 VD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCE 350
            D  ++A+ +++        D WILD+ C++++ P++ WF +Y+   GG +LMGD++ CE
Sbjct: 95  TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCE 154

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 155 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKG 211


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  117 bits (292), Expect = 3e-24
 Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 203 KSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVV 262

Query: 180 VD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCE 350
            D  ++A+ +++        D WILD+ C++++ P++ WF +Y+   GG +LMGD++ CE
Sbjct: 263 TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCE 322

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 323 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKG 379


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  117 bits (292), Expect = 3e-24
 Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 16/179 (8%)
 Frame = +3

Query: 33  KMACLGRGGASRRWRPKERECYFCGEKGHMIRNCPK-------------KGVPATTVESK 173
           K + + RG +  R R K   C +C   GH I  C K             KG      ++ 
Sbjct: 127 KSSSIYRGRSKSRGRYKS--CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAA 184

Query: 174 PIVD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSG 344
            + D  ++A+ +++        D WILD+ C++++ P++ WF +Y+   GG +LMGD++ 
Sbjct: 185 VVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTP 244

Query: 345 CEIEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           CE+ G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 245 CEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 303


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  114 bits (285), Expect = 2e-23
 Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
 Frame = +3

Query: 57  GASRRWRPKERECYFCGEKGHMIRNC--------------PKKGVPATTVESKPIVDAEA 194
           G S   R    +CY CG++GH+ ++C                +G  A+T +   ++ +EA
Sbjct: 218 GRSTSRRKTNLKCYNCGKRGHLKKDCWSNKKSGEKSSEASTSQGCVASTSDDGEVLYSEA 277

Query: 195 DFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCEIEGVGTV 371
              +S + K    D+WI+DS  + ++ P + WF +Y+P   GN+ MG++   EI G+GTV
Sbjct: 278 --AVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTV 335

Query: 372 QIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           +IK  DG IRTL+ VRHV  + +N++S+G LD  GY +D   G L V KG
Sbjct: 336 KIKMYDGTIRTLQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKG 385


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  112 bits (279), Expect = 1e-22
 Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 253 KSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVV 312

Query: 180 VDAEAD--FVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCE 350
            D ++D   +++        D WILD+  ++++ P++ WF +Y+   GG +LMGD++ CE
Sbjct: 313 TDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCE 372

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 373 VAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 429


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  112 bits (279), Expect = 1e-22
 Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 253 KSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVV 312

Query: 180 VDAEAD--FVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCE 350
            D ++D   +++        D WILD+  ++++ P++ WF +Y+   GG +LMGD++ CE
Sbjct: 313 TDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCE 372

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 373 VAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 429


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  110 bits (276), Expect = 2e-22
 Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 8/151 (5%)
 Frame = +3

Query: 93  CYFCGEKGHMIRNCPKK-------GVPATTVESKPIVDAEADFVISMQDKEIFDDLWILD 251
           C +C EKGH   +CPKK        V A   E     ++E D  +   +     D+W+LD
Sbjct: 225 CNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEED--TNSEEDIALVADEHTHHSDVWVLD 282

Query: 252 SVCSHYIGPHKKWFTSYKPA-GGNILMGDNSGCEIEGVGTVQIKTSDGLIRTLEGVRHVL 428
           S  S++I P ++WFT+Y+   GG+I M ++S C++ G G+++I+T DG   TL  VRHV 
Sbjct: 283 SGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVP 342

Query: 429 RVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
            + +N+ISL +LD+KG+S+    G L V KG
Sbjct: 343 LMTKNLISLSLLDSKGFSWSGKDGVLRVWKG 373


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  110 bits (275), Expect = 3e-22
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 425 KSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVV 484

Query: 180 VD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCE 350
            D  ++A+ +++        D WIL++ C +++ P++ WF +Y+    G +LMGD++ CE
Sbjct: 485 TDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCE 544

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 545 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 601


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  110 bits (275), Expect = 3e-22
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 20/177 (11%)
 Frame = +3

Query: 51  RGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGVPATTVESKPI 179
           +  +S R R K R     C +C   GH I  C K             KG      ++  +
Sbjct: 218 KSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVV 277

Query: 180 VD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCE 350
            D  ++A+ +++        D WIL++ C +++ P++ WF +Y+    G +LMGD++ CE
Sbjct: 278 TDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCE 337

Query: 351 IEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           + G+GTVQIK  DG IRTL  VRH+  ++R++ISL  LD KGY +  G G L V KG
Sbjct: 338 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 394


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  110 bits (275), Expect = 3e-22
 Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
 Frame = +3

Query: 57  GASRRWRPKERECYFCGEKGHMIRNC--------------PKKGVPATTVESKPIVDAEA 194
           G S+  R K  +CY CG KGH+ + C                +G  A+T +   I+ +EA
Sbjct: 218 GRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEA 277

Query: 195 DFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCEIEGVGTV 371
               S + +   +D+WI+DS  + ++ PH+ WF SY+P   G++ MG++   EI GVGT+
Sbjct: 278 --ATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTI 335

Query: 372 QIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKGH 524
           ++K  DG +R ++GVRHV  +++N++S+G LD  G       G L V KG+
Sbjct: 336 RLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGN 386


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  110 bits (275), Expect = 3e-22
 Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
 Frame = +3

Query: 57  GASRRWRPKERECYFCGEKGHMIRNC--------------PKKGVPATTVESKPIVDAEA 194
           G S+  R K  +CY CG KGH+ + C                +G  A+T +   I+ +EA
Sbjct: 218 GRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEA 277

Query: 195 DFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCEIEGVGTV 371
               S + +   +D+WI+DS  + ++ PH+ WF SY+P   G++ MG++   EI GVGT+
Sbjct: 278 --ATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTI 335

Query: 372 QIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKGH 524
           ++K  DG +R ++GVRHV  +++N++S+G LD  G       G L V KG+
Sbjct: 336 RLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGN 386


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  110 bits (275), Expect = 3e-22
 Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
 Frame = +3

Query: 57  GASRRWRPKERECYFCGEKGHMIRNC--------------PKKGVPATTVESKPIVDAEA 194
           G S+  R K  +CY CG KGH+ + C                +G  A+T +   I+ +EA
Sbjct: 218 GRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEA 277

Query: 195 DFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCEIEGVGTV 371
               S + +   +D+WI+DS  + ++ PH+ WF SY+P   G++ MG++   EI GVGT+
Sbjct: 278 --ATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTI 335

Query: 372 QIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKGH 524
           ++K  DG +R ++GVRHV  +++N++S+G LD  G       G L V KG+
Sbjct: 336 RLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGN 386


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score =  109 bits (273), Expect = 5e-22
 Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 20/188 (10%)
 Frame = +3

Query: 21  KKF*KMACLGRGGASRRWRPKER----ECYFCGEKGHMIRNCPK-------------KGV 149
           KK  K     +  +S R R K R     C +C   GH I  C K             KG 
Sbjct: 150 KKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGK 209

Query: 150 PATTVESKPIVD--AEADFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA-GGN 320
                ++  + D  ++A+ +++        D WILD+ C++++ P++ WF +Y+   GG 
Sbjct: 210 KEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGT 269

Query: 321 ILMGDNSGCEIEGVGTVQIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQG 500
           +LMGD++ CE+ G+G VQIK  DG IRTL  VRH   ++R++ISL  LD KGY +  G G
Sbjct: 270 VLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLDRKGYKYSGGDG 329

Query: 501 RLTVKKGH 524
            L +  G+
Sbjct: 330 ILKLILGN 337


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  109 bits (272), Expect = 6e-22
 Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
 Frame = +3

Query: 57  GASRRWRPKERECYFCGEKGHMIRNC--------------PKKGVPATTVESKPIVDAEA 194
           G S+  R    +CY CG KGH+ + C                +G  A+T +   I+ +EA
Sbjct: 218 GRSKSRRKNNIKCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILYSEA 277

Query: 195 DFVISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPAG-GNILMGDNSGCEIEGVGTV 371
               S + +   +D+WI+DS  + ++ PH+ WF SY+P   G++ MG++   EI GVGT+
Sbjct: 278 --ATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTI 335

Query: 372 QIKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKGH 524
           ++K  DG +R ++GVRHV  +++N++S+G LD  G    +  G L V KG+
Sbjct: 336 RLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGN 386


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  109 bits (272), Expect = 6e-22
 Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 5/148 (3%)
 Frame = +3

Query: 90  ECYFCGEKGHMIRNCPKKGVPATTVE--SKPIVDAEADF--VISMQDKEIFDDLWILDSV 257
           +CY C + G + R CP +     T    S  I+D   D   V++++     ++ W+LDS 
Sbjct: 125 KCYHCNKIGQIRRICPDRQQEEKTQAQGSAAIIDDGYDSTEVLTIRLNPNHEE-WVLDSG 183

Query: 258 CSHYIGPHKKWFTSYKPA-GGNILMGDNSGCEIEGVGTVQIKTSDGLIRTLEGVRHVLRV 434
           C++++ P + WF+SY+   GG +L+G+N  C + G+GT+ I   DG  RTL+ VRHV  +
Sbjct: 184 CTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDL 243

Query: 435 RRNVISLGVLDTKGYSFDAGQGRLTVKK 518
           +RN+ISLG LD  GY+F A  G+LT+ K
Sbjct: 244 KRNLISLGTLDKSGYNFKAKNGKLTISK 271


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  109 bits (272), Expect = 6e-22
 Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
 Frame = +3

Query: 51  RGGASRRWRPKERE-CYFCGEKGHMIRNCPK--------KGVPATTVESKPIVDAEA-DF 200
           R G S+   P  ++ C +C  K H I  C K        K     +V S  + D ++ D 
Sbjct: 219 RRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAVSDDDSGDC 278

Query: 201 VISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA--GGNILMGDNSGCEIEGVGTVQ 374
           ++         D WILDS CS +I   + WF+SYKP   G  + MGD++ C I G+G+VQ
Sbjct: 279 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQ 338

Query: 375 IKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           IKT DG+ RTL+ VR++  + RN+ISL  LD +GY +    G L V KG
Sbjct: 339 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKG 387


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  108 bits (271), Expect = 8e-22
 Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
 Frame = +3

Query: 51  RGGASRRWRPKERE-CYFCGEKGHMIRNCPK---------KGVPATTVESKPIVDAEADF 200
           R G S+   P  ++ C +C  K H I  C K         K    +   +    D   D 
Sbjct: 217 RRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDC 276

Query: 201 VISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA--GGNILMGDNSGCEIEGVGTVQ 374
           ++         D WILDS CS +I   + WF+SYKP   G  + MGD++ C I G+G+VQ
Sbjct: 277 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQ 336

Query: 375 IKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           IKT DG+ RTL+ VR++  + RN+ISL  LD +GY +    G L V KG
Sbjct: 337 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKG 385


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  108 bits (271), Expect = 8e-22
 Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
 Frame = +3

Query: 51  RGGASRRWRPKERE-CYFCGEKGHMIRNCPK---------KGVPATTVESKPIVDAEADF 200
           R G S+   P  ++ C +C  K H I  C K         K    +   +    D   D 
Sbjct: 217 RRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDC 276

Query: 201 VISMQDKEIFDDLWILDSVCSHYIGPHKKWFTSYKPA--GGNILMGDNSGCEIEGVGTVQ 374
           ++         D WILDS CS +I   + WF+SYKP   G  + MGD++ C I G+G+VQ
Sbjct: 277 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQ 336

Query: 375 IKTSDGLIRTLEGVRHVLRVRRNVISLGVLDTKGYSFDAGQGRLTVKKG 521
           IKT DG+ RTL+ VR++  + RN+ISL  LD +GY +    G L V KG
Sbjct: 337 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKG 385