BLASTX nr result
ID: Cocculus23_contig00020740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00020740
(349 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006489086.1| PREDICTED: probable isoleucine--tRNA ligase,... 97 2e-18
ref|XP_006419578.1| hypothetical protein CICLE_v10004211mg [Citr... 97 2e-18
emb|CBI26081.3| unnamed protein product [Vitis vinifera] 93 3e-17
ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [V... 93 3e-17
emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera] 93 3e-17
ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cuc... 92 1e-16
ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cuc... 92 1e-16
ref|XP_007044166.1| TRNA synthetase class I (I, L, M and V) fami... 91 2e-16
ref|XP_006279922.1| hypothetical protein CARUB_v10025780mg [Caps... 90 3e-16
ref|XP_002314391.1| tRNA synthetase class I family protein [Popu... 90 3e-16
ref|XP_006649094.1| PREDICTED: probable isoleucine--tRNA ligase,... 90 4e-16
ref|XP_006395100.1| hypothetical protein EUTSA_v10003524mg [Eutr... 90 4e-16
ref|XP_006395099.1| hypothetical protein EUTSA_v10003524mg [Eutr... 90 4e-16
dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] 90 4e-16
ref|NP_001190497.1| isoleucyl-tRNA synthetase-like protein [Arab... 90 4e-16
ref|NP_199714.2| isoleucyl-tRNA synthetase-like protein [Arabido... 90 4e-16
ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group] g... 89 5e-16
gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indi... 89 5e-16
ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus... 89 6e-16
ref|XP_004954104.1| PREDICTED: probable isoleucine--tRNA ligase,... 89 8e-16
>ref|XP_006489086.1| PREDICTED: probable isoleucine--tRNA ligase, mitochondrial-like
[Citrus sinensis]
Length = 1096
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
KVWIGVSRA+GSKCERCWNY +VGSF EHPTLC+RCY V+ V P+P+MAAVS
Sbjct: 1044 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 1096
>ref|XP_006419578.1| hypothetical protein CICLE_v10004211mg [Citrus clementina]
gi|557521451|gb|ESR32818.1| hypothetical protein
CICLE_v10004211mg [Citrus clementina]
Length = 1096
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
KVWIGVSRA+GSKCERCWNY +VGSF EHPTLC+RCY V+ V P+P+MAAVS
Sbjct: 1044 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 1096
>emb|CBI26081.3| unnamed protein product [Vitis vinifera]
Length = 1221
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
K+WIGVSRADGSKCERCWNY +VGSF+EHPTLC RCYNV+ V LPAMAAVS
Sbjct: 1170 KIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVNV-QLPAMAAVS 1221
>ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
Length = 1105
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
K+WIGVSRADGSKCERCWNY +VGSF+EHPTLC RCYNV+ V LPAMAAVS
Sbjct: 1054 KIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVNV-QLPAMAAVS 1105
>emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
Length = 1088
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
K+WIGVSRADGSKCERCWNY +VGSF+EHPTLC RCYNV+ V LPAMAAVS
Sbjct: 1037 KIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVNV-QLPAMAAVS 1088
>ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
Length = 1093
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
KVWIGVSRA+GSKCERCWN+ +VGSF EHPTLC RC+NV+ P PAMAAVS
Sbjct: 1041 KVWIGVSRAEGSKCERCWNFSLRVGSFPEHPTLCKRCFNVVAGHPEPAMAAVS 1093
>ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
Length = 1093
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
KVWIGVSRA+GSKCERCWN+ +VGSF EHPTLC RC+NV+ P PAMAAVS
Sbjct: 1041 KVWIGVSRAEGSKCERCWNFSLRVGSFPEHPTLCKRCFNVVAGHPEPAMAAVS 1093
>ref|XP_007044166.1| TRNA synthetase class I (I, L, M and V) family protein isoform 1
[Theobroma cacao] gi|508708101|gb|EOX99997.1| TRNA
synthetase class I (I, L, M and V) family protein isoform
1 [Theobroma cacao]
Length = 1093
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
KVWIGVSRA+GSKCERCWNY +VGSF EHPTLC RC++V+ + P P MAAV+
Sbjct: 1041 KVWIGVSRAEGSKCERCWNYSTQVGSFMEHPTLCGRCFSVVGIQPTPEMAAVT 1093
>ref|XP_006279922.1| hypothetical protein CARUB_v10025780mg [Capsella rubella]
gi|482548626|gb|EOA12820.1| hypothetical protein
CARUB_v10025780mg [Capsella rubella]
Length = 1090
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/52 (76%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVV-PPLPAMAA 197
KVWIGVSRA+GSKCERCWNY +VGSF++HPTLC RC+NVIV PP PA+AA
Sbjct: 1036 KVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFNVIVANPPKPAVAA 1087
>ref|XP_002314391.1| tRNA synthetase class I family protein [Populus trichocarpa]
gi|222863431|gb|EEF00562.1| tRNA synthetase class I
family protein [Populus trichocarpa]
Length = 981
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAA 197
+VWIGVSRA+G KCERCWNY P+VGSF EHPTLC RCY V+ V P PA++A
Sbjct: 929 RVWIGVSRAEGLKCERCWNYTPQVGSFVEHPTLCGRCYKVVAVQPEPAVSA 979
>ref|XP_006649094.1| PREDICTED: probable isoleucine--tRNA ligase, mitochondrial-like
[Oryza brachyantha]
Length = 1005
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = -1
Query: 346 VWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
+WIGV+RADG KCERCWNY VGSF +HPTLC RC+ VI +PP+PA AAVS
Sbjct: 954 IWIGVTRADGEKCERCWNYTRDVGSFVDHPTLCARCHGVIDLPPVPAAAAVS 1005
>ref|XP_006395100.1| hypothetical protein EUTSA_v10003524mg [Eutrema salsugineum]
gi|557091739|gb|ESQ32386.1| hypothetical protein
EUTSA_v10003524mg [Eutrema salsugineum]
Length = 1090
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVV-PPLPAMAAV 194
KVWIGVSRA+GSKCERCWNY +VGSF++HPTLC RC+NVIV PP P +AAV
Sbjct: 1036 KVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFNVIVANPPEPVVAAV 1088
>ref|XP_006395099.1| hypothetical protein EUTSA_v10003524mg [Eutrema salsugineum]
gi|557091738|gb|ESQ32385.1| hypothetical protein
EUTSA_v10003524mg [Eutrema salsugineum]
Length = 1276
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVV-PPLPAMAAV 194
KVWIGVSRA+GSKCERCWNY +VGSF++HPTLC RC+NVIV PP P +AAV
Sbjct: 1222 KVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFNVIVANPPEPVVAAV 1274
>dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
Length = 988
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/54 (74%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVV-PPLPAMAAVS 191
KVWIGVSRA+GSKCERCWNY +VGSF++HPTLC RC++VIV PP PA+AAV+
Sbjct: 932 KVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 985
>ref|NP_001190497.1| isoleucyl-tRNA synthetase-like protein [Arabidopsis thaliana]
gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase
[Arabidopsis thaliana]
Length = 1279
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/54 (74%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVV-PPLPAMAAVS 191
KVWIGVSRA+GSKCERCWNY +VGSF++HPTLC RC++VIV PP PA+AAV+
Sbjct: 1223 KVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 1276
>ref|NP_199714.2| isoleucyl-tRNA synthetase-like protein [Arabidopsis thaliana]
gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA
synthetase [Arabidopsis thaliana]
gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA
synthetase [Arabidopsis thaliana]
gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase
[Arabidopsis thaliana]
Length = 1093
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/54 (74%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVV-PPLPAMAAVS 191
KVWIGVSRA+GSKCERCWNY +VGSF++HPTLC RC++VIV PP PA+AAV+
Sbjct: 1037 KVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 1090
>ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group]
gi|46805524|dbj|BAD16975.1| putative isoleucyl-tRNA
synthetase [Oryza sativa Japonica Group]
gi|113537824|dbj|BAF10207.1| Os02g0778200 [Oryza sativa
Japonica Group] gi|222623772|gb|EEE57904.1| hypothetical
protein OsJ_08590 [Oryza sativa Japonica Group]
Length = 1058
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = -1
Query: 346 VWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
+WIGV+RADG KCERCWNY VGSF +HPTLC RC+ VI +PP+PA AAVS
Sbjct: 1007 IWIGVTRADGEKCERCWNYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAVS 1058
>gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indica Group]
Length = 1058
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = -1
Query: 346 VWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
+WIGV+RADG KCERCWNY VGSF +HPTLC RC+ VI +PP+PA AAVS
Sbjct: 1007 IWIGVTRADGEKCERCWNYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAVS 1058
>ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase,
putative [Ricinus communis]
Length = 1102
Score = 89.0 bits (219), Expect = 6e-16
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = -1
Query: 349 KVWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
+VWIGVSRA+G KCERCWNY VGSF EHPTLC RCY ++ + P PA+AA+S
Sbjct: 1050 RVWIGVSRAEGMKCERCWNYTADVGSFVEHPTLCGRCYRIVAMQPEPAVAAIS 1102
>ref|XP_004954104.1| PREDICTED: probable isoleucine--tRNA ligase, mitochondrial-like
[Setaria italica]
Length = 1058
Score = 88.6 bits (218), Expect = 8e-16
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = -1
Query: 346 VWIGVSRADGSKCERCWNYLPKVGSFAEHPTLCTRCYNVIVVPPLPAMAAVS 191
+WIGV+RADGSKCERCWNY VGSF +HPTLC RCY VI + P PA AAVS
Sbjct: 1007 IWIGVTRADGSKCERCWNYTRDVGSFRDHPTLCARCYGVIDLQPQPAAAAVS 1058
Database: ./nr
Posted date: May 19, 2014 3:28 PM
Number of letters in database: 13,856,398,315
Number of sequences in database: 38,876,450
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 38876450
Number of Hits to DB: 550,076,608,333,346
Number of extensions: 153143174
Number of successful extensions: 709655066
Number of sequences better than 1.0e-05: 109325485
Number of HSP's gapped: 264927067
Number of HSP's successfully gapped: 146753823
Length of database: 13,856,398,315
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)