BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00020600
         (261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   105   9e-21
ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfam...   100   3e-19
ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prun...    99   8e-19
ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...    92   1e-16
gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis]      88   1e-15
ref|XP_006404547.1| hypothetical protein EUTSA_v10000418mg [Eutr...    88   1e-15
ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citr...    86   7e-15
ref|XP_006296137.1| hypothetical protein CARUB_v10025289mg [Caps...    86   7e-15
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|NP_179705.1| pentatricopeptide repeat-containing protein [Ar...    83   4e-14
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ...    82   8e-14
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
gb|ADE76509.1| unknown [Picea sitchensis]                              78   1e-12
gb|AAM15176.1| putative selenium-binding protein [Arabidopsis th...    78   1e-12
ref|NP_180329.1| pentatricopeptide repeat-containing protein [Ar...    78   1e-12
tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea m...    77   2e-12

>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  105 bits (261), Expect = 9e-21
 Identities = 49/75 (65%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IYA +G WESV+K+R LMN+RQV+KE+AISW+E+E ++HSF+V D SHP+K++IY V
Sbjct: 534 LSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSV 593

Query: 81  VEHLAGQM-EDESLF 40
           +E LAGQM ED SLF
Sbjct: 594 LEQLAGQMEEDASLF 608


>ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508705834|gb|EOX97730.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 610

 Score =  100 bits (248), Expect = 3e-19
 Identities = 46/75 (61%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IY ++G WE VEK+RHLMNKRQVRKE A+SW+E+E ++H+FTV D  HP+K  IY +
Sbjct: 530 LSSIYGALGKWELVEKVRHLMNKRQVRKEVALSWIELENKVHTFTVSDTLHPLKGAIYSI 589

Query: 81  VEHLAGQM-EDESLF 40
           ++ LAGQ+ ED SLF
Sbjct: 590 LDQLAGQLDEDASLF 604


>ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prunus persica]
           gi|462396991|gb|EMJ02790.1| hypothetical protein
           PRUPE_ppa020837mg [Prunus persica]
          Length = 610

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/72 (61%), Positives = 61/72 (84%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IYA  G WE VEK+R LM++R VRKE+A+SW+EVE R+++FTV D+ HP+K+EIY V
Sbjct: 532 LSSIYAEHGKWELVEKVRQLMDERHVRKERALSWIEVENRVNAFTVSDRLHPLKEEIYSV 591

Query: 81  VEHLAGQMEDES 46
           +E LAGQME+++
Sbjct: 592 LEQLAGQMEEDA 603


>ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Fragaria vesca subsp. vesca]
          Length = 614

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 45/75 (60%), Positives = 60/75 (80%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IYA  G WE VEK+R LM++R VRKE+AISW+EV  RLH+FTV D+ HP+K+EIY V
Sbjct: 536 LSSIYAEEGRWELVEKVRRLMDERHVRKERAISWLEVGSRLHAFTVSDRLHPLKEEIYSV 595

Query: 81  VEHLAGQMEDESLFT 37
           ++ LA QME+++  T
Sbjct: 596 LKQLADQMEEDASLT 610


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 39/70 (55%), Positives = 57/70 (81%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+I+A++G WE VE +R LMN+R VRK++AISW+E+E ++HSFT  D+ HP+K+ IYL 
Sbjct: 525 LSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLA 584

Query: 81  VEHLAGQMED 52
           ++ LAG ME+
Sbjct: 585 LKQLAGHMEE 594


>gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis]
          Length = 637

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 38/74 (51%), Positives = 57/74 (77%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IYA +G WE V K+R LMN+R V+KE+A+SW+E++ ++++F   D+ HP+K+ IY V
Sbjct: 557 LSSIYAVLGRWELVRKVRQLMNRRHVKKERAVSWIEIDNKVYTFMASDKLHPMKEVIYSV 616

Query: 81  VEHLAGQMEDESLF 40
           +E LAGQME +  F
Sbjct: 617 LEELAGQMEVDVSF 630


>ref|XP_006404547.1| hypothetical protein EUTSA_v10000418mg [Eutrema salsugineum]
           gi|557105675|gb|ESQ46000.1| hypothetical protein
           EUTSA_v10000418mg [Eutrema salsugineum]
          Length = 596

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/72 (55%), Positives = 56/72 (77%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IYA  G+WESVEK+R +M  R+V KEKA+SW+E+EK++ +F V D SH  K+EIY V
Sbjct: 522 LSSIYADHGNWESVEKLRGVMKMRRVNKEKALSWIEIEKKIETFAVSDGSHQRKEEIYSV 581

Query: 81  VEHLAGQMEDES 46
           + +LA  ME+E+
Sbjct: 582 LHNLAALMEEEA 593


>ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like isoform X2 [Citrus sinensis]
          Length = 578

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 36/72 (50%), Positives = 58/72 (80%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IY+++G    VEK+R L+N+RQ +KE+AISW+E+E ++H+F+V D  HP++D +Y V
Sbjct: 500 LSSIYSALGKGRLVEKVRQLINERQFKKEQAISWIEIENKVHAFSVSDSLHPMRDVLYSV 559

Query: 81  VEHLAGQMEDES 46
           +E LAGQM +++
Sbjct: 560 LEQLAGQMGEDA 571


>ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like isoform X1 [Citrus sinensis]
          Length = 605

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 36/72 (50%), Positives = 58/72 (80%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IY+++G    VEK+R L+N+RQ +KE+AISW+E+E ++H+F+V D  HP++D +Y V
Sbjct: 527 LSSIYSALGKGRLVEKVRQLINERQFKKEQAISWIEIENKVHAFSVSDSLHPMRDVLYSV 586

Query: 81  VEHLAGQMEDES 46
           +E LAGQM +++
Sbjct: 587 LEQLAGQMGEDA 598


>ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citrus clementina]
           gi|557546563|gb|ESR57541.1| hypothetical protein
           CICLE_v10024503mg [Citrus clementina]
          Length = 595

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 36/72 (50%), Positives = 58/72 (80%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LS+IY+++G    VEK+R L+N+RQ +KE+AISW+E+E ++H+F+V D  HP++D +Y V
Sbjct: 517 LSSIYSALGKGRLVEKVRQLINERQFKKEQAISWIEIENKVHAFSVSDSLHPMRDVLYSV 576

Query: 81  VEHLAGQMEDES 46
           +E LAGQM +++
Sbjct: 577 LEQLAGQMGEDA 588


>ref|XP_006296137.1| hypothetical protein CARUB_v10025289mg [Capsella rubella]
           gi|482564845|gb|EOA29035.1| hypothetical protein
           CARUB_v10025289mg [Capsella rubella]
          Length = 597

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQS--HPVKDEIY 88
           LS IYA  G WESVEK+R +M KR+V KEKA+SW+E+EK++ +FTV D S  H  K+EIY
Sbjct: 521 LSGIYADHGKWESVEKLRGIMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY 580

Query: 87  LVVEHLAGQMEDES 46
            ++ +L   ME+E+
Sbjct: 581 FILHNLVALMEEEA 594


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 36/73 (49%), Positives = 56/73 (76%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           L+++YA +G WESVEK+R LM+++ +RKE+ ISW++V  + HSF   D+ HP+K+EIYL+
Sbjct: 537 LASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLL 596

Query: 81  VEHLAGQMEDESL 43
           +E LA   E++ L
Sbjct: 597 LEQLARHTEEDFL 609


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 36/73 (49%), Positives = 56/73 (76%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           L+++YA +G WESVEK+R LM+++ +RKE+ ISW++V  + HSF   D+ HP+K+EIYL+
Sbjct: 537 LASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLL 596

Query: 81  VEHLAGQMEDESL 43
           +E LA   E++ L
Sbjct: 597 LEQLARHTEEDFL 609


>ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g21090 gi|4803934|gb|AAD29807.1| unknown protein
           [Arabidopsis thaliana] gi|330252028|gb|AEC07122.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 597

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 39/74 (52%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQS--HPVKDEIY 88
           LS+IYA  G WE VEK+R +M KR+V KEKA+SW+E+EK++ +FTV D S  H  K+EIY
Sbjct: 521 LSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY 580

Query: 87  LVVEHLAGQMEDES 46
            ++ +LA  +E+E+
Sbjct: 581 FILHNLAAVIEEEA 594


>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326194|gb|EFH56614.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 599

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQS----HPVKDE 94
           LS+IYA  G WE VEK+R +M KR+V KEKA+SW+E+E ++ +FTV D S    H  K+E
Sbjct: 521 LSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKAFTVSDGSHAHAHARKEE 580

Query: 93  IYLVVEHLAGQMEDES 46
           IY ++ +LA  ME+E+
Sbjct: 581 IYFILHNLAALMEEEA 596


>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Solanum lycopersicum]
          Length = 606

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 47/68 (69%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LSNIYA  G WE V K+R LMN+R V+K  A SW+EV+ ++H+F   D SHP+ DEIY  
Sbjct: 443 LSNIYAQAGRWEGVAKLRELMNERGVKKTTAYSWIEVKNKVHAFLSGDTSHPMSDEIYAE 502

Query: 81  VEHLAGQM 58
           ++ L  +M
Sbjct: 503 LQSLGARM 510


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/69 (50%), Positives = 49/69 (71%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LSNIYA+ G W+ V K+R +M  R V+K+   SW+EV+ ++H+F V D+SHP  +EIY  
Sbjct: 83  LSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYST 142

Query: 81  VEHLAGQME 55
           +E LA QME
Sbjct: 143 LEELARQME 151


>gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 33/70 (47%), Positives = 51/70 (72%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LSN+YA  G W+   K+R LMN+R V+KE   SW+EV+ + +SF   D+SHP+KD+IY+ 
Sbjct: 308 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 367

Query: 81  VEHLAGQMED 52
           +E L+ +++D
Sbjct: 368 LEDLSTRLKD 377


>ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g27610 gi|3860271|gb|AAC73039.1| putative
           selenium-binding protein [Arabidopsis thaliana]
           gi|330252926|gb|AEC08020.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 33/70 (47%), Positives = 51/70 (72%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LSN+YA  G W+   K+R LMN+R V+KE   SW+EV+ + +SF   D+SHP+KD+IY+ 
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763

Query: 81  VEHLAGQMED 52
           +E L+ +++D
Sbjct: 764 LEDLSTRLKD 773


>tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/69 (47%), Positives = 50/69 (72%)
 Frame = -1

Query: 261 LSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLHSFTVFDQSHPVKDEIYLV 82
           LSNIYAS G W  V+KMRH+M++R V+K    SW+EV+ ++H+F+V D  HP +++IY  
Sbjct: 661 LSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAF 720

Query: 81  VEHLAGQME 55
           +E L  +M+
Sbjct: 721 LEDLDIRMK 729