BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00020365
         (788 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, part...   332   7e-89
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part...   331   2e-88
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part...   330   5e-88
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part...   328   1e-87
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun...   307   2e-81
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   287   3e-75
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]        286   5e-75
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  286   5e-75
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  286   5e-75
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   286   6e-75
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        285   1e-74
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                285   2e-74
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        285   2e-74
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        284   2e-74
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   284   3e-74
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   283   4e-74
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   283   4e-74
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   283   4e-74
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   282   9e-74
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...   281   1e-73

>ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, partial [Prunus persica]
            gi|462415551|gb|EMJ20288.1| hypothetical protein
            PRUPE_ppa015100mg, partial [Prunus persica]
          Length = 641

 Score =  332 bits (852), Expect = 7e-89
 Identities = 160/260 (61%), Positives = 205/260 (78%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            A YF+K DLKSGYHQVR+ EED WKTAFKTKQGL+ WLVMPF L NAPATFMRLMNEV+R
Sbjct: 242  AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 301

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P +D F IV+LDDIL++S T ++HL H+  VL++L+++QL+LN KK EF +  + YLG I
Sbjct: 302  PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYLGFI 361

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            VG GE++++  KV VI  WP P + TE+RSFIGA QYL+KFIR++S++AAPL  +   ++
Sbjct: 362  VGAGELKMNLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTKANQ 421

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
               W    +E+F++LK KI +APVLAL +++ PF+VE DAS +AMGAVL Q GK V YHS
Sbjct: 422  KFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPVAYHS 481

Query: 725  ELFSGAILNYPTYDKELYAM 784
            E+FSG +LNYPTYDKELYAM
Sbjct: 482  EMFSGPVLNYPTYDKELYAM 501


>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
            gi|462398849|gb|EMJ04517.1| hypothetical protein
            PRUPE_ppa019964mg, partial [Prunus persica]
          Length = 1488

 Score =  331 bits (849), Expect = 2e-88
 Identities = 159/260 (61%), Positives = 204/260 (78%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            A YF+K DLKSGYHQVR+ EED WKTAFK KQGL+ WLVMPF L NAPATFMRLMNEV+R
Sbjct: 668  AHYFTKLDLKSGYHQVRIHEEDTWKTAFKIKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 727

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P +D F IV+LDDIL++S T ++HL H+  VL++L+++QL+LN KK EF +  + YLG I
Sbjct: 728  PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYLGFI 787

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            VG GE+++D  KV VI  WP P + TE+RSFIGA QYL+KFIR++S++AAPL  +   ++
Sbjct: 788  VGAGELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTKANQ 847

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
               W    +E+F++LK KI +APVLAL +++ PF++E DAS +AMGAVL Q GK V YHS
Sbjct: 848  KFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDIEADASNYAMGAVLFQEGKPVAYHS 907

Query: 725  ELFSGAILNYPTYDKELYAM 784
            E+FSG +LNYPTYDKELYAM
Sbjct: 908  EMFSGPVLNYPTYDKELYAM 927


>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
            gi|462421192|gb|EMJ25455.1| hypothetical protein
            PRUPE_ppa018408mg, partial [Prunus persica]
          Length = 1440

 Score =  330 bits (845), Expect = 5e-88
 Identities = 159/260 (61%), Positives = 204/260 (78%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            A YF+K DLKSGYHQVR+ EED WKTAFKTKQGL+ WLVMPF L NAPATFM+LMNEV+R
Sbjct: 668  AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMQLMNEVLR 727

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P +D F IV+LDDIL++S T ++HL H+  VL++L+++QL+LN KK EF +  + YLG I
Sbjct: 728  PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYLGFI 787

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            VG  E+++D  KV VI  WP P + TE+RSFIGA QYL+KFIR++S++AAPL  +   ++
Sbjct: 788  VGAEELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTKANQ 847

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
               W    +E+F++LK KI +APVLAL +++ PF+VE DAS +AMGAVL Q GK V YHS
Sbjct: 848  KFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPVAYHS 907

Query: 725  ELFSGAILNYPTYDKELYAM 784
            E+FSG +LNYPTYDKELYAM
Sbjct: 908  EMFSGPVLNYPTYDKELYAM 927


>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
            gi|462423886|gb|EMJ28149.1| hypothetical protein
            PRUPE_ppa025194mg, partial [Prunus persica]
          Length = 1347

 Score =  328 bits (841), Expect = 1e-87
 Identities = 159/260 (61%), Positives = 203/260 (78%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            A YF+K DLKSGYHQVR+ EED WKTAFKTKQGL+ WLVMPF L NAPATFMRLMNEV+R
Sbjct: 595  AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 654

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P +D F IV+LDDIL++S T ++HL H+  VL++L+++QL+LN KK EF +  + Y G I
Sbjct: 655  PFIDDFIIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYPGFI 714

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            VG  E+++D  KV VI  WP P + TE+RSFIGA QYL+KFIR++S++AAPL  +   ++
Sbjct: 715  VGARELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTKANQ 774

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
               W    +E+F++LK KI +APVLAL +++ PF+VE DAS +AMGAVL Q GK V YHS
Sbjct: 775  KFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPVAYHS 834

Query: 725  ELFSGAILNYPTYDKELYAM 784
            E+FSG +LNYPTYDKELYAM
Sbjct: 835  EMFSGPVLNYPTYDKELYAM 854


>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
            gi|462415599|gb|EMJ20336.1| hypothetical protein
            PRUPE_ppa015965mg [Prunus persica]
          Length = 1484

 Score =  307 bits (787), Expect = 2e-81
 Identities = 152/260 (58%), Positives = 192/260 (73%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            A YF+K DLKSGYHQVR+ EED WKTAFKTKQGL+ WLVMPF L NAPATFMRLMNEV+R
Sbjct: 681  AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 740

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P +D F IV+LDDIL++S T ++HL H+                +K EF +  + YLG I
Sbjct: 741  PFIDDFVIVYLDDILIFSVTWEDHLHHIA---------------QKCEFGKQHLVYLGFI 785

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            VG GE+++D  KV VI  WP P + TE+RSFIGA QYL+KFIR++S++AAPL  +   ++
Sbjct: 786  VGAGELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTKANQ 845

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
               W    +E+F++LK KI +APVLAL +++ PF+VE DAS +AMGAVL Q GK V YHS
Sbjct: 846  KFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPVAYHS 905

Query: 725  ELFSGAILNYPTYDKELYAM 784
            ++FSG +LNYPTYDKELYAM
Sbjct: 906  KMFSGPVLNYPTYDKELYAM 925


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  287 bits (734), Expect = 3e-75
 Identities = 138/261 (52%), Positives = 185/261 (70%)
 Frame = +2

Query: 5   AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
           +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 165 SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 224

Query: 185 PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
           P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 225 PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 284

Query: 365 VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
           V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 285 VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGV 344

Query: 545 PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
           P TWG  ++ AF +LK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 345 PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFS 404

Query: 725 ELFSGAILNYPTYDKELYAMV 787
           E  SG +LNY TYDKELYA+V
Sbjct: 405 EKLSGPVLNYSTYDKELYALV 425


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score =  286 bits (733), Expect = 5e-75
 Identities = 138/261 (52%), Positives = 185/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 637  SIVFSKADLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 696

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 697  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 756

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 757  VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGV 816

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 817  PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFS 876

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG +LNY TYDKELYA+V
Sbjct: 877  EKLSGLVLNYSTYDKELYALV 897



 Score =  134 bits (336), Expect = 5e-29
 Identities = 64/156 (41%), Positives = 95/156 (60%)
 Frame = +2

Query: 320  KSEFARTTVNYLGHIVGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNY 499
            K EF  + V +LGH++    + +DP  V+ + DW  P T T++RSF+G   Y ++FI N+
Sbjct: 1673 KCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENF 1732

Query: 500  SRLAAPLLRMLAKDRPITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAM 679
            S++A P+ ++L K+    W P+ ++AF+ LKEK+  +PVL L D R  F V  DAS   +
Sbjct: 1733 SKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASRQGL 1792

Query: 680  GAVLLQGGKLVCYHSELFSGAILNYPTYDKELYAMV 787
            G VL+Q G +V Y S        NYPT+D EL A+V
Sbjct: 1793 GCVLMQDGHVVAYASRQLWPHEGNYPTHDLELAAVV 1828


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  286 bits (733), Expect = 5e-75
 Identities = 139/261 (53%), Positives = 185/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 860  SIIFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 919

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
              + +F +V+ DDIL+YS + ++HL HLR V   L+ ++L  N+ K  F    V++LG++
Sbjct: 920  AFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYV 979

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +K+  I+ WP P T T++RSF+G   + ++F+R++S +AAPL  +  KD 
Sbjct: 980  VTPQGIEVDKAKIEAIESWPQPKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDV 1039

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P +WG  ++EAF VLK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 1040 PYSWGTAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFS 1099

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG  LNY TYDKELYA+V
Sbjct: 1100 EKLSGPSLNYSTYDKELYALV 1120


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  286 bits (733), Expect = 5e-75
 Identities = 139/261 (53%), Positives = 185/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 857  SIIFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 916

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
              + +F +V+ DDIL+YS + ++HL HLR V   L+ ++L  N+ K  F    V++LG++
Sbjct: 917  AFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYV 976

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +K+  I+ WP P T T++RSF+G   + ++F+R++S +AAPL  +  KD 
Sbjct: 977  VTPQGIEVDKAKIEAIESWPQPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDV 1036

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P +WG  ++EAF VLK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 1037 PYSWGTAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFS 1096

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG  LNY TYDKELYA+V
Sbjct: 1097 EKLSGPSLNYSTYDKELYALV 1117


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  286 bits (732), Expect = 6e-75
 Identities = 138/261 (52%), Positives = 185/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 801  SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 860

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 861  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 920

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 921  VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGV 980

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 981  PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFS 1040

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG +LNY TYDKELYA+V
Sbjct: 1041 EKLSGPVLNYSTYDKELYALV 1061



 Score =  206 bits (523), Expect = 1e-50
 Identities = 104/229 (45%), Positives = 144/229 (62%)
 Frame = +2

Query: 101  GLYIWLVMPFRLTNAPATFMRLMNEVMRPVLDKFAIVFLDDILVYSPT*KEHLSHLRTVL 280
            GLY + VM F LTNAPA FM LMN+V    LDKF +VF+DDILVYS + ++H  HLR VL
Sbjct: 1625 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVL 1684

Query: 281  QILQSSQLKLNMKKSEFARTTVNYLGHIVGDGEIQIDPSKVSVIKDWPPPTTQTELRSFI 460
              L+  QL   + K EF  + V +LGH++    + +DP  V+ + DW  P T T++RSF+
Sbjct: 1685 GKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFL 1744

Query: 461  GATQYLQKFIRNYSRLAAPLLRMLAKDRPITWGPEEKEAFEVLKEKICQAPVLALTDMRM 640
            G   Y ++FI N+S++A P+ ++L K+    W P+ ++AF+ LKEK+  +PVL L D R 
Sbjct: 1745 GLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRK 1804

Query: 641  PFEVETDASGHAMGAVLLQGGKLVCYHSELFSGAILNYPTYDKELYAMV 787
             F V  DAS   +G VL+Q G +V Y S        NYPT+D EL A+V
Sbjct: 1805 DFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVV 1853


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  285 bits (730), Expect = 1e-74
 Identities = 137/261 (52%), Positives = 184/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 746  SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 805

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH  HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 806  PFIGKFVVVYFDDILIYSKSMGEHFKHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 865

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 866  VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGV 925

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 926  PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFS 985

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  +G +LNY TYDKELYA+V
Sbjct: 986  EKLTGPVLNYSTYDKELYALV 1006


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  285 bits (728), Expect = 2e-74
 Identities = 137/261 (52%), Positives = 183/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RM   D WKTAFKTK GLY WLVMPF LTNAP TFMRLMNEV+R
Sbjct: 724  SIVFSKVDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLR 783

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 784  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 843

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 844  VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGV 903

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 904  PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFS 963

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG +LNY TYDKELYA+V
Sbjct: 964  EKLSGPVLNYSTYDKELYALV 984


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  285 bits (728), Expect = 2e-74
 Identities = 137/261 (52%), Positives = 183/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RM   D WKTAFKTK GLY WLVMPF LTNAP TFMRLMNEV+R
Sbjct: 724  SIVFSKVDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLR 783

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 784  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 843

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 844  VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGV 903

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK+K+  AP+L L D    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 904  PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFS 963

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG +LNY TYDKELYA+V
Sbjct: 964  EKLSGPVLNYSTYDKELYALV 984


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  284 bits (727), Expect = 2e-74
 Identities = 136/261 (52%), Positives = 183/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK DL+SGYHQ+RMK  D WKT FKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 895  SIVFSKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 954

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N+KK  F    V++LG++
Sbjct: 955  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLKKCTFCTDRVSFLGYV 1014

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 1015 VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGV 1074

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK+K+  AP+L L D    FE+E DA+G  +G V LQ GK V Y S
Sbjct: 1075 PFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDANGIGLGGVFLQEGKPVAYFS 1134

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG +LNY TYDKELYA+V
Sbjct: 1135 EKLSGPVLNYSTYDKELYALV 1155



 Score =  139 bits (350), Expect = 1e-30
 Identities = 77/207 (37%), Positives = 112/207 (54%)
 Frame = +2

Query: 77   KTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMRPVLDKFAIVFLDDILVYSPT*KEH 256
            KT F    G Y +  M F L NAPA+F R M  +   +++    +F+DD  VY  T    
Sbjct: 2016 KTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTFGHC 2075

Query: 257  LSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHIVGDGEIQIDPSKVSVIKDWPPPTT 436
            L +L  VLQ  Q   L LN +K  F       LGH V +  I+ D +K+ VI   PPP  
Sbjct: 2076 LQNLDKVLQRCQEKDLVLNWEKCHFMVREGIVLGHRVSERGIEFDRAKIDVIDQLPPPVN 2135

Query: 437  QTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDRPITWGPEEKEAFEVLKEKICQAPV 616
               +RSF+G   + ++FI+++S +A PL  +LAKD P  +     ++FE+LK+ +   P+
Sbjct: 2136 IKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDACLKSFEILKKALDSGPI 2195

Query: 617  LALTDMRMPFEVETDASGHAMGAVLLQ 697
            +   D  +PFE+  DAS  A+GAVL Q
Sbjct: 2196 IQPPDWTLPFEIMCDASDFAVGAVLGQ 2222


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  284 bits (726), Expect = 3e-74
 Identities = 137/261 (52%), Positives = 183/261 (70%)
 Frame = +2

Query: 5    AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
            +I FSK +L+SGYHQ+ MK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 780  SIVFSKVELRSGYHQIHMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 839

Query: 185  PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
            P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++LG++
Sbjct: 840  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYV 899

Query: 365  VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
            V    I++D +KV  I+ WP P T +++RSF+G   +  +F++++S +AAPL  +  K  
Sbjct: 900  VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGV 959

Query: 545  PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
            P TWG  ++ AF +LK K+  AP+L L D    FE+E DASG  +G VLLQ GKLV Y S
Sbjct: 960  PFTWGTSQENAFHMLKHKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKLVAYFS 1019

Query: 725  ELFSGAILNYPTYDKELYAMV 787
            E  SG +LNY TYDKELYA+V
Sbjct: 1020 EKLSGPVLNYSTYDKELYALV 1040


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  283 bits (725), Expect = 4e-74
 Identities = 138/258 (53%), Positives = 182/258 (70%)
 Frame = +2

Query: 14   FSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMRPVL 193
            FSK DL+SGYHQ+RMK  D WKT FKTK GLY WLVMPF LTNAP+TFMRLMNEV+R  +
Sbjct: 848  FSKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFI 907

Query: 194  DKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHIVGD 373
             +F +V+ DDIL+YS + +EHL HLR V   L+ ++L  N+ K  F    V++LG++V  
Sbjct: 908  GRFVVVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYVVTP 967

Query: 374  GEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDRPIT 553
              I++D +K+  I+ WP P T T++RSF+G   + ++F+R++S +AAPL  +  KD P  
Sbjct: 968  QGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFV 1027

Query: 554  WGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHSELF 733
            WG  ++EAF VLK+K+  AP+L L +    FE+E DASG  +G VLLQ GK V Y SE F
Sbjct: 1028 WGTAQEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKF 1087

Query: 734  SGAILNYPTYDKELYAMV 787
            SG  LNY TYDKELYA+V
Sbjct: 1088 SGPSLNYSTYDKELYALV 1105


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  283 bits (725), Expect = 4e-74
 Identities = 134/257 (52%), Positives = 178/257 (69%)
 Frame = +2

Query: 14   FSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMRPVL 193
            FSK DLKSGYHQ+R+   D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMN V +   
Sbjct: 787  FSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFH 846

Query: 194  DKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHIVGD 373
             KF +V+ DDIL++S    EHL HL+ V ++L++ +L  N+KK  F    V +LG +V  
Sbjct: 847  GKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSS 906

Query: 374  GEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDRPIT 553
              +++D  K+  IK+WP P + TE+RSF G   + ++F+R++S +AAPL  ++ KD+  T
Sbjct: 907  MGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFT 966

Query: 554  WGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHSELF 733
            WG E+ +AF +LK+K+C AP+L L D    FEVE DASG  +GAVL+Q  K + Y SE  
Sbjct: 967  WGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVLMQDSKPIAYFSEKL 1026

Query: 734  SGAILNYPTYDKELYAM 784
            SGA LNY T DKELYA+
Sbjct: 1027 SGATLNYSTNDKELYAL 1043


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  283 bits (725), Expect = 4e-74
 Identities = 134/257 (52%), Positives = 178/257 (69%)
 Frame = +2

Query: 14   FSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMRPVL 193
            FSK DLKSGYHQ+R+   D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMN V +   
Sbjct: 787  FSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFH 846

Query: 194  DKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHIVGD 373
             KF +V+ DDIL++S    EHL HL+ V ++L++ +L  N+KK  F    V +LG +V  
Sbjct: 847  GKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSS 906

Query: 374  GEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDRPIT 553
              +++D  K+  IK+WP P + TE+RSF G   + ++F+R++S +AAPL  ++ KD+  T
Sbjct: 907  MGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFT 966

Query: 554  WGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHSELF 733
            WG E+ +AF +LK+K+C AP+L L D    FEVE DASG  +GAVL+Q  K + Y SE  
Sbjct: 967  WGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVLMQDSKPIAYFSEKL 1026

Query: 734  SGAILNYPTYDKELYAM 784
            SGA LNY T DKELYA+
Sbjct: 1027 SGATLNYSTNDKELYAL 1043


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  282 bits (722), Expect = 9e-74
 Identities = 133/258 (51%), Positives = 183/258 (70%)
 Frame = +2

Query: 14   FSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMRPVL 193
            FSK DL+ GYHQ+RM++ D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMN V+R  +
Sbjct: 747  FSKIDLRRGYHQIRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFI 806

Query: 194  DKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHIVGD 373
             KF +V+ DDIL+YS   ++H+ HL+ V  +L+  QL  N++K  F   +V +LG IV  
Sbjct: 807  GKFVVVYFDDILIYSKDPQKHIIHLKEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSS 866

Query: 374  GEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDRPIT 553
              I++D +K+  I+DWP P T T++RSF G   + ++F++++S +AAPL  ++ KD    
Sbjct: 867  KGIEVDETKIQAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFE 926

Query: 554  WGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHSELF 733
            WGP++++AF+ LKEK+C A VL+L +    FE+E DASG  +GAVL+Q G  + Y SE  
Sbjct: 927  WGPKQEQAFQTLKEKLCSAQVLSLPNFDKTFEIECDASGIGIGAVLMQEGHPIAYFSEKL 986

Query: 734  SGAILNYPTYDKELYAMV 787
            SG  LNY TYDKELYA+V
Sbjct: 987  SGPALNYSTYDKELYALV 1004


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score =  281 bits (720), Expect = 1e-73
 Identities = 136/261 (52%), Positives = 184/261 (70%)
 Frame = +2

Query: 5   AIYFSKFDLKSGYHQVRMKEEDIWKTAFKTKQGLYIWLVMPFRLTNAPATFMRLMNEVMR 184
           +I FSK DL+SGYHQ+RMK  D WKTAFKTK GLY WLVMPF LTNAP+TFMRLMNEV+R
Sbjct: 134 SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 193

Query: 185 PVLDKFAIVFLDDILVYSPT*KEHLSHLRTVLQILQSSQLKLNMKKSEFARTTVNYLGHI 364
           P + KF +V+ DDIL+YS +  EH +HLR V   L+ ++L  N++K  F    V++L ++
Sbjct: 194 PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLDYV 253

Query: 365 VGDGEIQIDPSKVSVIKDWPPPTTQTELRSFIGATQYLQKFIRNYSRLAAPLLRMLAKDR 544
           V    I++D +KV  I+ WP P T +++RSF+G   + ++F++++S +AAPL  +  K  
Sbjct: 254 VTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKVV 313

Query: 545 PITWGPEEKEAFEVLKEKICQAPVLALTDMRMPFEVETDASGHAMGAVLLQGGKLVCYHS 724
           P TWG  ++ AF +LK+K+  AP+L L +    FE+E DASG  +G VLLQ GK V Y S
Sbjct: 314 PFTWGTSQENAFHMLKDKLTHAPLLQLPNFNKTFELECDASGIGLGGVLLQEGKPVAYFS 373

Query: 725 ELFSGAILNYPTYDKELYAMV 787
           E  SG +LNY TYDKELYA+V
Sbjct: 374 EKLSGPVLNYSTYDKELYALV 394