BLASTX nr result
ID: Cocculus23_contig00019933
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019933
(892 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr... 229 8e-58
ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi... 228 2e-57
emb|CBI29222.3| unnamed protein product [Vitis vinifera] 228 2e-57
ref|XP_002303480.2| pentatricopeptide repeat-containing family p... 225 2e-56
ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prun... 224 5e-56
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi... 202 2e-49
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi... 201 2e-49
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi... 195 2e-47
ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containi... 184 2e-44
ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containi... 184 4e-44
ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutr... 183 7e-44
ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily pr... 182 1e-43
ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Caps... 177 6e-42
sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-c... 174 4e-41
emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|72687... 174 4e-41
ref|NP_567587.1| pentatricopeptide repeat-containing protein [Ar... 174 4e-41
ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arab... 174 5e-41
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss... 172 2e-40
gb|EYU29134.1| hypothetical protein MIMGU_mgv1a001281mg [Mimulus... 171 3e-40
ref|XP_003628993.1| Pentatricopeptide repeat-containing protein ... 171 5e-40
>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
gi|568835123|ref|XP_006471629.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568835125|ref|XP_006471630.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557534991|gb|ESR46109.1| hypothetical protein
CICLE_v10000274mg [Citrus clementina]
Length = 833
Score = 229 bits (585), Expect = 8e-58
Identities = 124/211 (58%), Positives = 152/211 (72%), Gaps = 2/211 (0%)
Frame = +3
Query: 264 KKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRF 443
K V ++LS SLD SKC+ L +LSPQ FD +F + S+VNP+TAL FFYFA FRF
Sbjct: 56 KWVSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKTALKFFYFASQSCNFRF 115
Query: 444 TVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGRE 623
TV SYC LIRLLL +NL++PARLLLIRLIDGK+ L+ + + RHI+IA + DL+
Sbjct: 116 TVRSYCLLIRLLLFSNLLSPARLLLIRLIDGKMPVLYASNPS-IRHIEIASQMVDLNVTS 174
Query: 624 GDLVGV--IDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANEL 797
+GV DL+VHVYCTQFK LG G DVF F+ + +FPSLKTCNFLL+SLVKANE+
Sbjct: 175 EPALGVQIADLLVHVYCTQFKNLGFGYAIDVFSIFSNKGIFPSLKTCNFLLNSLVKANEV 234
Query: 798 ERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
++ EVF +CR GVSPDV FST IN FCK
Sbjct: 235 QKGIEVFETMCR-GVSPDVFLFSTAINAFCK 264
>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 228 bits (581), Expect = 2e-57
Identities = 122/216 (56%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + K V +ILS+PSLD ++C+ L+ LSP +FD +F + +VNP+TALNFFYFA D
Sbjct: 113 DHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDS 172
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIAD 608
GFRFT+ SYC L+R L+ + V+PARLLLIRLID KL LF + KN RHI+IA +AD
Sbjct: 173 CGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKN--RHIEIASAMAD 230
Query: 609 LS--GREGDLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLV 782
L+ G G V +DL++HVYCTQF+ +G VFRF A + +FP++KTC FLLSSLV
Sbjct: 231 LNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLV 290
Query: 783 KANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
KANELE+S VF + R GVSPDV FST IN FCK
Sbjct: 291 KANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCK 325
>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 228 bits (581), Expect = 2e-57
Identities = 122/216 (56%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + K V +ILS+PSLD ++C+ L+ LSP +FD +F + +VNP+TALNFFYFA D
Sbjct: 46 DHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDS 105
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIAD 608
GFRFT+ SYC L+R L+ + V+PARLLLIRLID KL LF + KN RHI+IA +AD
Sbjct: 106 CGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKN--RHIEIASAMAD 163
Query: 609 LS--GREGDLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLV 782
L+ G G V +DL++HVYCTQF+ +G VFRF A + +FP++KTC FLLSSLV
Sbjct: 164 LNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLV 223
Query: 783 KANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
KANELE+S VF + R GVSPDV FST IN FCK
Sbjct: 224 KANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCK 258
>ref|XP_002303480.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342907|gb|EEE78459.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 842
Score = 225 bits (574), Expect = 2e-56
Identities = 122/211 (57%), Positives = 150/211 (71%), Gaps = 2/211 (0%)
Frame = +3
Query: 264 KKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRF 443
K+V ILS+PSLD +KC+ L+ LSPQ FD F S+VNP+TALNFF+F + FRF
Sbjct: 65 KRVSLILSNPSLDCAKCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRF 124
Query: 444 TVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGRE 623
T SYC LI LL+GN+L++PARLLLIRLIDGK+ A + E RH +IA+ +AD +
Sbjct: 125 TARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARNF-ESRHFEIAQIMADFNLVF 183
Query: 624 GDLVGV--IDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANEL 797
++GV DL+VHVY TQFK LG G DVF A + LFPSLKTC FLLSSLVKANEL
Sbjct: 184 EPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANEL 243
Query: 798 ERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
++S EV+ IC GG+ PDV FST+IN FCK
Sbjct: 244 KKSYEVYDFICLGGIIPDVHLFSTMINAFCK 274
>ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prunus persica]
gi|462413303|gb|EMJ18352.1| hypothetical protein
PRUPE_ppa001463mg [Prunus persica]
Length = 821
Score = 224 bits (570), Expect = 5e-56
Identities = 118/209 (56%), Positives = 153/209 (73%), Gaps = 2/209 (0%)
Frame = +3
Query: 270 VIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFTV 449
V +ILS PSLD SKC+ L+ LS FDR+F + S+VNP+TAL+FFYFA + F+FTV
Sbjct: 57 VSSILSKPSLDSSKCKALIPLLSSHEFDRVFCSISSNVNPKTALHFFYFASESFKFQFTV 116
Query: 450 GSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLS--GRE 623
S+C L+RLL+ +NLV+PARLLLIRLIDG + L+ N + RH++IA + DL+ +
Sbjct: 117 RSFCVLVRLLILSNLVSPARLLLIRLIDGNVPVLYAN--HNQRHMEIAIAMLDLNTVSTQ 174
Query: 624 GDLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELER 803
G V +DL++HVYCTQFK +G G D F F+ + +FPSLKTCNFLLSSLVKANEL +
Sbjct: 175 GLGVQALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLKTCNFLLSSLVKANELHK 234
Query: 804 SCEVFSLICRGGVSPDVISFSTLINVFCK 890
S +VF ++CR GVSPDV F+T IN FCK
Sbjct: 235 SYDVFEVMCR-GVSPDVYLFTTAINAFCK 262
>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum tuberosum]
Length = 928
Score = 202 bits (513), Expect = 2e-49
Identities = 110/211 (52%), Positives = 144/211 (68%), Gaps = 2/211 (0%)
Frame = +3
Query: 264 KKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRF 443
K V+++LS+P +D K ++LL L+PQ+FD IF SS+ P L FF+ A GF F
Sbjct: 153 KWVVSVLSNPPVDSLKIKDLLTLLTPQQFDAIFLEIYSSLKPLNVLKFFHVASGTCGFSF 212
Query: 444 TVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGRE 623
+V SYC L+RLL+ +N PARLLLIRLIDGKL ALF+ ++ +H+++A +A+LSG
Sbjct: 213 SVRSYCTLLRLLVASNHDVPARLLLIRLIDGKLPALFDT--SQQKHVEVAVSLAELSGVS 270
Query: 624 --GDLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANEL 797
G V DL++H+ CTQFK +G DVFR A R ++PSLKTCNFLLSSLVK NEL
Sbjct: 271 DFGVAVRTFDLLLHLCCTQFKNVGFDAALDVFRSLASRGVYPSLKTCNFLLSSLVKENEL 330
Query: 798 ERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
+S EVF ++ + GV PDV FST IN FCK
Sbjct: 331 WKSYEVFGIL-KDGVEPDVYLFSTAINAFCK 360
>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum lycopersicum]
Length = 839
Score = 201 bits (512), Expect = 2e-49
Identities = 111/211 (52%), Positives = 143/211 (67%), Gaps = 2/211 (0%)
Frame = +3
Query: 264 KKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRF 443
K V+++LS P +D K ++LL L+PQ+FD IF SS+ P L FF+ A F F
Sbjct: 64 KWVVSVLSDPPVDSLKIKDLLTLLNPQQFDAIFLEIHSSLKPLNVLKFFHVASGTCSFSF 123
Query: 444 TVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGRE 623
TV SYC L+RLL+ +N APARLLLIRLIDGKL ALF++ + +H+++A +A+LSG
Sbjct: 124 TVRSYCTLVRLLIASNHDAPARLLLIRLIDGKLPALFDS--LQQKHVEVAVSLAELSGVS 181
Query: 624 --GDLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANEL 797
G V DL++H+ CTQFK +G DVFR A R ++PSLKTCNFLLSSLVK NEL
Sbjct: 182 DFGVAVRTFDLLLHLCCTQFKSVGFDAALDVFRSLASRGVYPSLKTCNFLLSSLVKENEL 241
Query: 798 ERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
+S EVF ++ + GV PDV FST IN FCK
Sbjct: 242 WKSYEVFEIL-KDGVKPDVYLFSTAINAFCK 271
>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 195 bits (495), Expect = 2e-47
Identities = 108/209 (51%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Frame = +3
Query: 270 VIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFTV 449
V ++LS SLD SKC LL LSP +FD++F + NP T LNFFYFA + FRFT+
Sbjct: 50 VSSVLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTI 109
Query: 450 GSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGREG- 626
SYC LI LL+ + + PARLLLIRLIDG L L N +E HI+IA + L+ G
Sbjct: 110 HSYCTLILLLIRSKFIPPARLLLIRLIDGNLPVL--NLDSEKFHIEIANALFGLTSVVGR 167
Query: 627 -DLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELER 803
+ DL++HVY TQF+ LG DVF A + FPSLKTCNFLLSSLVKANE E+
Sbjct: 168 FEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEK 227
Query: 804 SCEVFSLICRGGVSPDVISFSTLINVFCK 890
CEVF ++ G PDV SF+ +IN CK
Sbjct: 228 CCEVFRVMSE-GACPDVFSFTNVINALCK 255
>ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 840
Score = 184 bits (467), Expect(2) = 2e-44
Identities = 102/208 (49%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Frame = +3
Query: 276 AILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFTVGS 455
+IL+S +LD SKC+++L L+P FDR+F + +VNP+T FF FA FRFTV S
Sbjct: 65 SILTSKTLDSSKCKSILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRS 124
Query: 456 YCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNE--DRHIDIARGIADLS-GREG 626
YC L+R LL ++ V AR LL RLIDG + DR +IA + +L+ G +
Sbjct: 125 YCLLLRSLLADSFVPRARFLLARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDE 184
Query: 627 DLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELERS 806
+G +DL++H+ C+QFK LG FD+F F+ R +FP LKTCN LLSSLVKANEL +S
Sbjct: 185 QRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKS 244
Query: 807 CEVFSLICRGGVSPDVISFSTLINVFCK 890
EVF L C+ GV+PDV +F+T IN FCK
Sbjct: 245 YEVFDLACQ-GVAPDVFTFTTAINAFCK 271
Score = 22.7 bits (47), Expect(2) = 2e-44
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 VPPESLYSPNPIASLSSQPSI 183
+PP S P P SLSS PSI
Sbjct: 46 LPPPSPPPPPPHPSLSSIPSI 66
>ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502153968|ref|XP_004509526.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Cicer arietinum]
gi|502153970|ref|XP_004509527.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X3 [Cicer arietinum]
gi|502153972|ref|XP_004509528.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X4 [Cicer arietinum]
gi|502153974|ref|XP_004509529.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X5 [Cicer arietinum]
gi|502153976|ref|XP_004509530.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X6 [Cicer arietinum]
gi|502153978|ref|XP_004509531.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X7 [Cicer arietinum]
gi|502153980|ref|XP_004509532.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X8 [Cicer arietinum]
gi|502153982|ref|XP_004509533.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X9 [Cicer arietinum]
gi|502153984|ref|XP_004509534.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X10 [Cicer arietinum]
Length = 835
Score = 184 bits (467), Expect = 4e-44
Identities = 101/205 (49%), Positives = 133/205 (64%)
Frame = +3
Query: 276 AILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFTVGS 455
+ILS LD SKC+++L L+P +FD +F T S+VN +T L+FF FA + F FTV S
Sbjct: 62 SILSHKILDSSKCKSILPHLTPHQFDTLFFTHHSTVNLKTTLDFFRFASNQFKFCFTVRS 121
Query: 456 YCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGREGDLV 635
YC LIRLLL +N + AR + RLIDG + N +DR ++A +LS
Sbjct: 122 YCLLIRLLLCSNHLPRARFFMKRLIDGNVSTPLLNR--DDRLSEMASSFLELSRLTERSH 179
Query: 636 GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELERSCEV 815
G +DL++H+ C+QF+ LG FD+F F +FPSLKTCNFLLSSLVK+NEL +S V
Sbjct: 180 GELDLLLHILCSQFQHLGFHWAFDIFTLFTSNGVFPSLKTCNFLLSSLVKSNELHKSYRV 239
Query: 816 FSLICRGGVSPDVISFSTLINVFCK 890
F ++CRGGVS DV +FST IN F K
Sbjct: 240 FDVVCRGGVSLDVYTFSTAINAFSK 264
>ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutrema salsugineum]
gi|557115148|gb|ESQ55431.1| hypothetical protein
EUTSA_v10024401mg [Eutrema salsugineum]
Length = 837
Score = 183 bits (465), Expect = 7e-44
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 2/216 (0%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + +++ A LS SLD +C+ L+ LSP FDR+F S VNP+TAL+FF A D
Sbjct: 70 DRHLRERLSAALSRRSLDYEQCKQLIATLSPHEFDRLFPDFRSKVNPKTALDFFRLASDS 129
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIAD 608
F F++ SYC LI LLL +L++PARL+LIRLI+G + L + D + IA +A
Sbjct: 130 FSFSFSLRSYCLLIGLLLDASLLSPARLVLIRLINGNVPVLPSANDSRDGRVAIADAMAS 189
Query: 609 LS--GREGDLVGVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLV 782
LS + + DL++ VYCTQFK G L D+F A + LFPS TCN LL+SLV
Sbjct: 190 LSLCFDPEIRMRISDLLIEVYCTQFKRAGCYLALDIFPLLANKGLFPSRTTCNILLTSLV 249
Query: 783 KANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
+ANE ++ CE F +C+ GVSPDV F+T+IN +CK
Sbjct: 250 RANEFQKCCEAFEAVCK-GVSPDVYLFTTVINAYCK 284
>ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590680604|ref|XP_007040907.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590680608|ref|XP_007040908.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|590680612|ref|XP_007040909.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590680616|ref|XP_007040910.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|590680620|ref|XP_007040911.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778151|gb|EOY25407.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778152|gb|EOY25408.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778153|gb|EOY25409.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778154|gb|EOY25410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778155|gb|EOY25411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778156|gb|EOY25412.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 845
Score = 182 bits (463), Expect = 1e-43
Identities = 107/210 (50%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
Frame = +3
Query: 267 KVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFT 446
++ ILS SLD SKC+ LL LSP FDR FS S +NP+T L+FFY A FRFT
Sbjct: 70 RLSCILSKSSLDSSKCKQLLPLLSPLDFDRFFSAISSHLNPKTTLHFFYLASQSFNFRFT 129
Query: 447 VGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGREG 626
+ SYC LI LLL N +PARLL IRLIDGKL N D HI I +ADL+
Sbjct: 130 LRSYCILILLLLLANHSSPARLLFIRLIDGKLPLSSPNNTTID-HIQITTALADLNTLSK 188
Query: 627 DLVGV--IDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELE 800
+ V +D+++H+YCTQFK G DVF A + +FPS KTCNF LSSLVKANEL+
Sbjct: 189 GVPRVMGVDMLLHLYCTQFKNAGFTSAIDVFFTLADKGMFPSSKTCNFFLSSLVKANELQ 248
Query: 801 RSCEVFSLICRGGVSPDVISFSTLINVFCK 890
++ +VF + R VS DV +T+IN FCK
Sbjct: 249 KTYQVFETLSR-FVSLDVYLCTTMINAFCK 277
>ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Capsella rubella]
gi|482551263|gb|EOA15456.1| hypothetical protein
CARUB_v10004123mg [Capsella rubella]
Length = 838
Score = 177 bits (448), Expect = 6e-42
Identities = 101/217 (46%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + ++ ++LS SLD C+ L+ LSP FDR+F S VNP+TALNFF A D
Sbjct: 70 DRHLHDRLSSVLSKRSLDYELCKQLITVLSPLEFDRLFPEFRSKVNPKTALNFFRLASDS 129
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKN-EDRHIDIARGIA 605
F F++ SYC LI LLL NL++PAR+ LIRLI+G + L + D + IA +A
Sbjct: 130 FSFSFSLRSYCLLIGLLLDANLLSPARVTLIRLINGNVPVLPCGDGGLRDSRVAIADAMA 189
Query: 606 DLSGREGDLV--GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSL 779
LS + + + DL++ VYCTQFK G L DVF F A + +FPS TCN LL+SL
Sbjct: 190 RLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPFLANKGMFPSKTTCNILLTSL 249
Query: 780 VKANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
V+ANE ++ CE F ++C+ GV PDV F+T IN FCK
Sbjct: 250 VRANEFQKCCEAFEVVCK-GVFPDVYLFTTAINAFCK 285
>sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 174 bits (441), Expect = 4e-41
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 2/216 (0%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + +++ ++LS SLD +C+ L+ LSP FDR+F S VNP+TAL+FF A D
Sbjct: 73 DRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDS 132
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIAD 608
F F++ SYC LI LLL NL++ AR++LIRLI+G + L + D + IA +A
Sbjct: 133 FSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLR--DSRVAIADAMAS 190
Query: 609 LSGREGDLV--GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLV 782
LS + + + DL++ VYCTQFK G L DVF A + +FPS TCN LL+SLV
Sbjct: 191 LSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLV 250
Query: 783 KANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
+ANE ++ CE F ++C+ GVSPDV F+T IN FCK
Sbjct: 251 RANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCK 285
>emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|7268739|emb|CAB78946.1|
putative protein [Arabidopsis thaliana]
Length = 814
Score = 174 bits (441), Expect = 4e-41
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 2/216 (0%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + +++ ++LS SLD +C+ L+ LSP FDR+F S VNP+TAL+FF A D
Sbjct: 49 DRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDS 108
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIAD 608
F F++ SYC LI LLL NL++ AR++LIRLI+G + L + D + IA +A
Sbjct: 109 FSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLR--DSRVAIADAMAS 166
Query: 609 LSGREGDLV--GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLV 782
LS + + + DL++ VYCTQFK G L DVF A + +FPS TCN LL+SLV
Sbjct: 167 LSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLV 226
Query: 783 KANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
+ANE ++ CE F ++C+ GVSPDV F+T IN FCK
Sbjct: 227 RANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCK 261
>ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis
thaliana] gi|332658782|gb|AEE84182.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 174 bits (441), Expect = 4e-41
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 2/216 (0%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + +++ ++LS SLD +C+ L+ LSP FDR+F S VNP+TAL+FF A D
Sbjct: 60 DRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDS 119
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIAD 608
F F++ SYC LI LLL NL++ AR++LIRLI+G + L + D + IA +A
Sbjct: 120 FSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLR--DSRVAIADAMAS 177
Query: 609 LSGREGDLV--GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLV 782
LS + + + DL++ VYCTQFK G L DVF A + +FPS TCN LL+SLV
Sbjct: 178 LSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLV 237
Query: 783 KANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
+ANE ++ CE F ++C+ GVSPDV F+T IN FCK
Sbjct: 238 RANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCK 272
>ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata] gi|297313772|gb|EFH44195.1| hypothetical protein
ARALYDRAFT_492917 [Arabidopsis lyrata subsp. lyrata]
Length = 817
Score = 174 bits (440), Expect = 5e-41
Identities = 99/217 (45%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
Frame = +3
Query: 249 DEIVSKKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDP 428
D + +++ ++LS SLD +C+ L+ LSP FDR+F VNP+TAL+FF A D
Sbjct: 49 DRHLHERLSSVLSKRSLDYEQCKQLITVLSPHEFDRLFPEFRFKVNPKTALDFFRLASDS 108
Query: 429 LGFRFTVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLRAL-FENEKNEDRHIDIARGIA 605
F F++ SYC LI LLL NL +PAR++LIRLI+G + L N D + IA +A
Sbjct: 109 FSFSFSLRSYCLLIGLLLDANLSSPARVVLIRLINGNVPVLPCGNGGLRDSRVAIADAMA 168
Query: 606 DLSGREGDLV--GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSL 779
LS + + + DL++ VYCTQFK G L DVF A + +FPS TCN LL+SL
Sbjct: 169 SLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSL 228
Query: 780 VKANELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
V+A E ++ CE F ++C+ GVSPDV F+T IN FCK
Sbjct: 229 VRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCK 264
>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 846
Score = 172 bits (436), Expect = 2e-40
Identities = 102/205 (49%), Positives = 128/205 (62%)
Frame = +3
Query: 276 AILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFTVGS 455
+ILS PSLD SK + LL LSP FDR F +P+T LNFF+ A FRFT+ S
Sbjct: 85 SILSKPSLDSSKSKQLLPLLSPSDFDRFFIALSPRADPKTTLNFFHLASRCFNFRFTLRS 144
Query: 456 YCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGREGDLV 635
Y LI LLL +N + ARLLLIRLIDGKL N HI IA +ADL+ +
Sbjct: 145 YYILILLLLLSNNSSAARLLLIRLIDGKLPLFSPNNPPTVNHIQIAIALADLNTSFKGVA 204
Query: 636 GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELERSCEV 815
GV DL++H+YCTQFK +G DVF A + +FPS KTCNF L+SL+KANE+ ++ +V
Sbjct: 205 GV-DLLLHLYCTQFKNVGFTYAIDVFFTLAYKGIFPSTKTCNFFLNSLLKANEVRKTYQV 263
Query: 816 FSLICRGGVSPDVISFSTLINVFCK 890
F + R VS DV +T+IN FCK
Sbjct: 264 FETLSR-SVSLDVYLCTTMINGFCK 287
>gb|EYU29134.1| hypothetical protein MIMGU_mgv1a001281mg [Mimulus guttatus]
Length = 847
Score = 171 bits (434), Expect = 3e-40
Identities = 102/213 (47%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Frame = +3
Query: 264 KKVIAILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRF 443
K + ++LS + + ++C+ L+ +SP++FD IF +++ P TAL FYFA D F F
Sbjct: 74 KSLASVLSGSNFNSNQCKELISQISPRQFDSIFWEIHNNIEPSTALKLFYFAGDYCSFSF 133
Query: 444 TVGSYCNLIRLLLGNNLVAPARLLLIRLIDGKLR-ALFENEKNEDRHIDIARGIAD-LSG 617
T+ SYC L LL+ NL + ARLLLIRLID KL +L +N N H +IA +AD SG
Sbjct: 134 TLRSYCILFHLLVSKNLDSAARLLLIRLIDRKLPVSLRDNVVN--LHNEIAIVLADTFSG 191
Query: 618 REGDLVG--VIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKAN 791
E G D++VHVY T+FK LGL DVFR AGR L PS KTCNFL+S+LVKA+
Sbjct: 192 SEKFRSGNRGFDMLVHVYATEFKSLGLDAAMDVFRLLAGRRLVPSFKTCNFLMSTLVKAD 251
Query: 792 ELERSCEVFSLICRGGVSPDVISFSTLINVFCK 890
E E+S E+F ++ R + PDV +ST IN CK
Sbjct: 252 EHEKSYEIFLIVSRESL-PDVYLYSTAINALCK 283
>ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 819
Score = 171 bits (432), Expect = 5e-40
Identities = 92/205 (44%), Positives = 129/205 (62%)
Frame = +3
Query: 276 AILSSPSLDRSKCRNLLFDLSPQRFDRIFSTGCSSVNPRTALNFFYFALDPLGFRFTVGS 455
+IL+ LD SKC+ L+ +L+P F+ F T ++VN +T L+FF FA FRFTV S
Sbjct: 54 SILAHKVLDSSKCKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRS 113
Query: 456 YCNLIRLLLGNNLVAPARLLLIRLIDGKLRALFENEKNEDRHIDIARGIADLSGREGDLV 635
YC LIRLLL +N + A+ L RLI+G + K + R +IA +L R
Sbjct: 114 YCILIRLLLASNHIPRAKFTLKRLIEGNANTPLK--KTDARLSEIASAFLELGERSH--- 168
Query: 636 GVIDLVVHVYCTQFKGLGLGLGFDVFRFFAGRNLFPSLKTCNFLLSSLVKANELERSCEV 815
G +DL++++ C+QF+ LG FD F F + +FPSLK+CNFL+SSLVK+NEL +S V
Sbjct: 169 GELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRV 228
Query: 816 FSLICRGGVSPDVISFSTLINVFCK 890
F +CRGGV DV +++T IN +CK
Sbjct: 229 FDAMCRGGVLIDVYTYATAINAYCK 253