BLASTX nr result
ID: Cocculus23_contig00019888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019888
(578 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi... 125 1e-26
emb|CBI19956.3| unnamed protein product [Vitis vinifera] 125 1e-26
ref|XP_007200748.1| hypothetical protein PRUPE_ppa027193mg [Prun... 123 3e-26
gb|EXB90557.1| hypothetical protein L484_001711 [Morus notabilis] 119 6e-25
ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containi... 118 1e-24
ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein... 112 9e-23
ref|XP_006472911.1| PREDICTED: pentatricopeptide repeat-containi... 111 2e-22
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi... 102 6e-20
ref|XP_002302197.1| pentatricopeptide repeat-containing family p... 100 3e-19
gb|EMT23702.1| Pentatricopeptide repeat-containing protein [Aegi... 95 1e-17
tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 ... 91 2e-16
gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea m... 91 2e-16
gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indi... 90 5e-16
dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protei... 90 5e-16
ref|XP_004970797.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004502595.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_003602124.1| Pentatricopeptide repeat-containing protein ... 87 2e-15
ref|XP_006646534.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [S... 86 7e-15
ref|XP_006385300.1| hypothetical protein POPTR_0003s02590g [Popu... 86 9e-15
>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 125 bits (313), Expect = 1e-26
Identities = 58/89 (65%), Positives = 72/89 (80%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PNDVVWGA+LGACRVHLD EMA++VV+++ + +N+ SG D+HYVLLSNIYAASD+WEK
Sbjct: 486 KPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEK 545
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN*EH 267
A KMRM M N QKT G S+ +PGN H
Sbjct: 546 AEKMRMEMANKGFQKTSGCSSIMPGNNTH 574
>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 125 bits (313), Expect = 1e-26
Identities = 58/89 (65%), Positives = 72/89 (80%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PNDVVWGA+LGACRVHLD EMA++VV+++ + +N+ SG D+HYVLLSNIYAASD+WEK
Sbjct: 357 KPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEK 416
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN*EH 267
A KMRM M N QKT G S+ +PGN H
Sbjct: 417 AEKMRMEMANKGFQKTSGCSSIMPGNNTH 445
>ref|XP_007200748.1| hypothetical protein PRUPE_ppa027193mg [Prunus persica]
gi|462396148|gb|EMJ01947.1| hypothetical protein
PRUPE_ppa027193mg [Prunus persica]
Length = 435
Score = 123 bits (309), Expect = 3e-26
Identities = 54/83 (65%), Positives = 67/83 (80%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PN +VWGAMLGACR+++D EM EQVVKD+G L +N+GSGD+ HYVLLSNIYAASD+WE
Sbjct: 349 KPNGMVWGAMLGACRIYMDMEMTEQVVKDIGTLDSNIGSGDNLHYVLLSNIYAASDRWET 408
Query: 181 ARKMRMLMTNNRIQKTPGHSTFI 249
A + R+ M N QKTP HS F+
Sbjct: 409 AERTRIAMVNEGFQKTPAHSAFV 431
>gb|EXB90557.1| hypothetical protein L484_001711 [Morus notabilis]
Length = 543
Score = 119 bits (298), Expect = 6e-25
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPND VWGAMLGACR+HLD EM E+V K++ L + MGSG + H+VLLSNIYA+S++W K
Sbjct: 457 EPNDTVWGAMLGACRIHLDMEMTERVAKEINNLNSKMGSGQNEHFVLLSNIYASSERWAK 516
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIP 252
A ++R+++TN QKTPG S+F+P
Sbjct: 517 AERLRLVITNEGFQKTPGCSSFMP 540
>ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Fragaria vesca subsp. vesca]
Length = 603
Score = 118 bits (296), Expect = 1e-24
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PND+VWGAMLGACR+++D EM EQV KD+ L +++ S D++HYVLLSNIYAASD+WEK
Sbjct: 517 KPNDMVWGAMLGACRIYMDMEMTEQVAKDISTLNSSIRSADNSHYVLLSNIYAASDRWEK 576
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIP 252
A + RM + N +KTP HS F+P
Sbjct: 577 AERTRMDLVNEGFEKTPAHSAFMP 600
>ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508724700|gb|EOY16597.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 578
Score = 112 bits (279), Expect = 9e-23
Identities = 55/83 (66%), Positives = 64/83 (77%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PNDVVWGA+LGACRVHLDT M EQV+++VG L N +HYVLLSNIYAASD+WEK
Sbjct: 464 KPNDVVWGALLGACRVHLDTNMVEQVMQEVGRLAHN------SHYVLLSNIYAASDRWEK 517
Query: 181 ARKMRMLMTNNRIQKTPGHSTFI 249
A KMRM M + QKTPG S+ I
Sbjct: 518 AEKMRMTMVSKGFQKTPGLSSVI 540
>ref|XP_006472911.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Citrus sinensis]
Length = 562
Score = 111 bits (277), Expect = 2e-22
Identities = 46/86 (53%), Positives = 65/86 (75%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PND VWGA+LGACR+H DT+M EQ+++++ + + SGDD+HYVLLSNIYA SD+WE+
Sbjct: 465 KPNDAVWGALLGACRIHADTDMVEQIMEELSASNSTLDSGDDSHYVLLSNIYAGSDRWER 524
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN 258
A MR++M +QK PG S+ + N
Sbjct: 525 AESMRLVMAKKGLQKIPGRSSVMLNN 550
>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Solanum lycopersicum]
Length = 528
Score = 102 bits (255), Expect = 6e-20
Identities = 52/98 (53%), Positives = 67/98 (68%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PND V GA+LGACRVH DT M E V+K+V L SGDDAHYV+ SNIYAA+++WEK
Sbjct: 432 KPNDTVLGALLGACRVHSDTNMVENVLKEVRKLNYISDSGDDAHYVIFSNIYAAAERWEK 491
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN*EH*FTFIHILT 294
A +MR ++N QKTPG S + E +F+ +LT
Sbjct: 492 AERMRYALSNKGSQKTPGCSVVMLDGPE--TSFMQVLT 527
>ref|XP_002302197.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222843923|gb|EEE81470.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 440
Score = 100 bits (249), Expect = 3e-19
Identities = 46/88 (52%), Positives = 62/88 (70%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PND VWGA LGACR+H+D +M EQVV+DV +++ SG+D HY LL NIYA S WEK
Sbjct: 349 KPNDTVWGAFLGACRIHMDNDMVEQVVEDVCTSDSSVDSGNDPHYALLLNIYAGSGSWEK 408
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN*E 264
A ++ M+M + +QKT G S+ + N E
Sbjct: 409 AGRVSMVMADRGLQKTSGRSSLMLENTE 436
>gb|EMT23702.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 582
Score = 95.1 bits (235), Expect = 1e-17
Identities = 41/81 (50%), Positives = 63/81 (77%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WGA+LGACRVH + EM+E+V ++ L ++ S +DA Y++LSNI AAS++WE+
Sbjct: 448 EPNEVIWGALLGACRVHDNAEMSERVSDEINQLRSDGASTNDAEYIMLSNILAASERWEQ 507
Query: 181 ARKMRMLMTNNRIQKTPGHST 243
A ++R M N+ ++KTPG S+
Sbjct: 508 AERVRRKMANHGVEKTPGCSS 528
>tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 91.3 bits (225), Expect = 2e-16
Identities = 42/88 (47%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D EM+ V +++ L + S +DA Y++L+NI AAS++WE+
Sbjct: 448 EPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQ 507
Query: 181 ARKMRMLMTNNRIQKTPGHSTF---IPG 255
A +MR M ++KTPG S+ IPG
Sbjct: 508 AEQMRRKMARRGVEKTPGCSSLELGIPG 535
>gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 91.3 bits (225), Expect = 2e-16
Identities = 42/88 (47%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D EM+ V +++ L + S +DA Y++L+NI AAS++WE+
Sbjct: 448 EPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQ 507
Query: 181 ARKMRMLMTNNRIQKTPGHSTF---IPG 255
A +MR M ++KTPG S+ IPG
Sbjct: 508 AEQMRRKMARRGVEKTPGCSSLELGIPG 535
>gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indica Group]
Length = 548
Score = 89.7 bits (221), Expect = 5e-16
Identities = 41/81 (50%), Positives = 59/81 (72%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D EM+E V ++ L + S +DA Y+LLSNI A+S++WE+
Sbjct: 447 EPNEVIWGSLLGACRVHGDAEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWEQ 506
Query: 181 ARKMRMLMTNNRIQKTPGHST 243
A +MR M + + KTPG S+
Sbjct: 507 AERMRRKMALHGVGKTPGCSS 527
>dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|125572862|gb|EAZ14377.1|
hypothetical protein OsJ_04297 [Oryza sativa Japonica
Group] gi|215697551|dbj|BAG91545.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 548
Score = 89.7 bits (221), Expect = 5e-16
Identities = 41/81 (50%), Positives = 59/81 (72%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D EM+E V ++ L + S +DA Y+LLSNI A+S++WE+
Sbjct: 447 EPNEVIWGSLLGACRVHGDAEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWEQ 506
Query: 181 ARKMRMLMTNNRIQKTPGHST 243
A +MR M + + KTPG S+
Sbjct: 507 AERMRRKMALHGVGKTPGCSS 527
>ref|XP_004970797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Setaria italica]
Length = 453
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/81 (49%), Positives = 58/81 (71%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D EM+ V ++ L + S +DA Y++LSNI AAS++WE+
Sbjct: 349 EPNEVIWGSLLGACRVHGDAEMSRLVSDEINRLHSGRASSNDAAYIMLSNIMAASERWEQ 408
Query: 181 ARKMRMLMTNNRIQKTPGHST 243
A ++R M I+KTPG S+
Sbjct: 409 AEQLRRKMACLGIEKTPGCSS 429
>ref|XP_004502595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Cicer arietinum]
Length = 533
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PN+ V G MLGAC +H D +MAEQV+K G+ A G+ +H VL+SNIYAAS+KWEK
Sbjct: 438 KPNETVLGGMLGACWIHSDMKMAEQVIKMTGVDSATCGN---SHNVLMSNIYAASEKWEK 494
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN 258
A MR M N +K PG S+ I N
Sbjct: 495 AEMMRRTMVNGGSEKIPGCSSIIINN 520
>ref|XP_003602124.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491172|gb|AES72375.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 616
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PN+ V GAM+GAC +H D +MAEQV+K M+GA+ + ++H VLLSNIYAAS+KWEK
Sbjct: 443 KPNETVLGAMIGACWIHSDMKMAEQVMK---MIGADSAACVNSHNVLLSNIYAASEKWEK 499
Query: 181 ARKMRMLMTNNRIQKTPGHSTFIPGN 258
A +R M + +K PG+S+ I N
Sbjct: 500 AEMIRSSMVDGGSEKIPGYSSIILSN 525
>ref|XP_006646534.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Oryza brachyantha]
Length = 534
Score = 87.0 bits (214), Expect = 3e-15
Identities = 39/81 (48%), Positives = 58/81 (71%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D +M+E V ++ L + S +DA Y+L+SNI A+S +WE+
Sbjct: 443 EPNEVIWGSLLGACRVHGDADMSELVSSEISRLHSRRVSTNDAEYILMSNIMASSKRWEQ 502
Query: 181 ARKMRMLMTNNRIQKTPGHST 243
A +MR M + + KTPG S+
Sbjct: 503 AERMRRKMALHGVGKTPGCSS 523
>ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein
SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 85.9 bits (211), Expect = 7e-15
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
EPN+V+WG++LGACRVH D EM+ V ++ L + S +DA Y++LSNI AAS +WE+
Sbjct: 448 EPNEVIWGSLLGACRVHGDAEMSRLVTDEIHRLHSVHASSNDAEYIMLSNIMAASKRWEQ 507
Query: 181 ARKMRMLMTNNRIQKTPGHST 243
A ++R M + ++KTP S+
Sbjct: 508 AEQIRRKMARHGVEKTPACSS 528
>ref|XP_006385300.1| hypothetical protein POPTR_0003s02590g [Populus trichocarpa]
gi|550342241|gb|ERP63097.1| hypothetical protein
POPTR_0003s02590g [Populus trichocarpa]
Length = 764
Score = 85.5 bits (210), Expect = 9e-15
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +1
Query: 1 EPNDVVWGAMLGACRVHLDTEMAEQVVKDVGMLGANMGSGDDAHYVLLSNIYAASDKWEK 180
+PN +VWGA+LGACR+H D EMAE+ ++ + L N G A YVL NIYAA +KW+K
Sbjct: 538 KPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNG----AVYVLQCNIYAACNKWDK 593
Query: 181 ARKMRMLMTNNRIQKTPGHS 240
R++R +M + I+KTPG S
Sbjct: 594 LRELRQVMMDRGIKKTPGCS 613