BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00019823
         (1568 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   600   e-169
gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]           591   e-166
ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Popu...   588   e-165
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   585   e-164
ref|XP_007137869.1| hypothetical protein PHAVU_009G162600g [Phas...   578   e-162
ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citr...   577   e-162
ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like...   577   e-162
ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Gly...   575   e-161
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   573   e-161
ref|XP_004235304.1| PREDICTED: RNA pseudourine synthase 7-like [...   572   e-160
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              572   e-160
ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [...   572   e-160
ref|XP_006347631.1| PREDICTED: RNA pseudouridine synthase 7-like...   571   e-160
ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [...   568   e-159
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...   566   e-158
gb|EYU43033.1| hypothetical protein MIMGU_mgv1a022495mg [Mimulus...   551   e-154
ref|XP_007038074.1| Pseudouridine synthase family protein isofor...   551   e-154
ref|XP_007038073.1| Pseudouridine synthase family protein isofor...   535   e-149
ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [...   528   e-147
ref|NP_001136977.1| uncharacterized protein LOC100217137 [Zea ma...   528   e-147

>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  600 bits (1547), Expect = e-169
 Identities = 294/389 (75%), Positives = 324/389 (83%), Gaps = 5/389 (1%)
 Frame = -1

Query: 1541 MKRSRD-----DMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIV 1377
            MKR R+     DME IVWQTPANPP +HDYIF +GRRHVRPYYFEFI H KNRWAGKTIV
Sbjct: 1    MKRKREEENKNDME-IVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIV 59

Query: 1376 DLFAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVF 1197
            DLFAEEFKGRPY+YYVSAVKCGRIQVDGE VPVSYIV+SSQKISHFLHRHEPPV   D+ 
Sbjct: 60   DLFAEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIP 119

Query: 1196 ILVKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILA 1017
            +L K+PDVVTV KPA+VPVHPCGQYRKNTVVGILQAEH+LAPLFPVHRLDRLVSGLLILA
Sbjct: 120  VLYKDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILA 179

Query: 1016 RNAAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVD 837
            RNA KADLFRQ+IEAGMV+KQY+AKV+GVFPE+E+VV  NI YNAREGRST E+G+S VD
Sbjct: 180  RNALKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVD 239

Query: 836  MPLKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVAT 657
             P K K A TKF+RIST+GTHSIVLC+PITGRTHQIRVHLQY GHPIAND LYLS+  A+
Sbjct: 240  SPPKGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAAS 299

Query: 656  RFAEGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGY 477
            R AEGM   +AA  +  C T   P             +DF IDPMCTNCPNL PKGY+ Y
Sbjct: 300  RSAEGMSADRAACSSSYCVT---PQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVY 356

Query: 476  EEGLWLHCVKYSGPNWEYECPLPDWAVLN 390
            EE LWLHCV+YSGP W YECP PDWA+L+
Sbjct: 357  EECLWLHCVQYSGPGWVYECPYPDWAILS 385


>gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]
          Length = 399

 Score =  591 bits (1523), Expect = e-166
 Identities = 293/388 (75%), Positives = 317/388 (81%), Gaps = 2/388 (0%)
 Frame = -1

Query: 1550 ENEMKRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDL 1371
            E E +  +  ME IVWQTPANPP +HDYIF NGRRHVRPYYFEFI HVK RWAGKTIVDL
Sbjct: 15   EEEEEEKKKKME-IVWQTPANPPEKHDYIFRNGRRHVRPYYFEFIAHVKIRWAGKTIVDL 73

Query: 1370 FAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFIL 1191
            FAEEFKGRPYEYYVSAVKCGRIQVDGE+VPVSYIV+SSQKISHFLHRHEPPV+  DV +L
Sbjct: 74   FAEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVLALDVKVL 133

Query: 1190 VKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARN 1011
             KEPDVVTV KPAS PVHPCGQYRKNTVVGILQAEHDLAP+FPVHRLDRLVSGLLILARN
Sbjct: 134  HKEPDVVTVWKPASAPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARN 193

Query: 1010 AAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMP 831
            A+KAD FRQQIEAG V+KQY+A+VIGVFPE EKVVD NI YNAREGRST E+GDS  D P
Sbjct: 194  ASKADSFRQQIEAGKVQKQYVARVIGVFPEHEKVVDVNINYNAREGRSTAEVGDSCCDTP 253

Query: 830  LKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRF 651
            +K K ASTKF+RI+T+G  SIVLCEP+TGRTHQIRVHLQY GHPIAND LYLSK    R 
Sbjct: 254  VKGKAASTKFTRIATNGIQSIVLCEPVTGRTHQIRVHLQYAGHPIANDTLYLSKEFVDRS 313

Query: 650  AEGMGGQKAA--MVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGY 477
             EG    +AA  +   + P+S                EDF IDPMCTNCPNL PKGY+G 
Sbjct: 314  TEGTTADRAAAGLDRSLSPSSGQ---DFLRQNEESSTEDFCIDPMCTNCPNLGPKGYDGD 370

Query: 476  EEGLWLHCVKYSGPNWEYECPLPDWAVL 393
            EEGLWLHCV+YSGP W YECP PDWA L
Sbjct: 371  EEGLWLHCVRYSGPGWAYECPYPDWATL 398


>ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Populus trichocarpa]
            gi|550322484|gb|EEF05856.2| hypothetical protein
            POPTR_0015s11340g [Populus trichocarpa]
          Length = 388

 Score =  588 bits (1516), Expect = e-165
 Identities = 289/391 (73%), Positives = 322/391 (82%), Gaps = 8/391 (2%)
 Frame = -1

Query: 1541 MKRSRDDMEN-------IVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKT 1383
            MKR R + E        IVWQTPANPP +HDYIF +GRRHVRPY+FEFI HVKNRWAGKT
Sbjct: 1    MKRKRGEKEEAAEKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKT 60

Query: 1382 IVDLFAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESD 1203
            IVDLFAEEFKGRPY+YYVSAVKCGRIQVDGE+VPVSYIV+SSQKISHF+HRHEPPVM  D
Sbjct: 61   IVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWD 120

Query: 1202 VFILVKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLI 1023
            V IL KE DVVTV KPA+VPVHPCGQYRKNTVVG+LQAEH LAPLFPVHRLDRLVSGLLI
Sbjct: 121  VPILDKEDDVVTVWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLI 180

Query: 1022 LARNAAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSF 843
            LARNA +ADLFRQ+IEAG V+KQY+AKVIGVFPE+E++VD N+ YNAREGRSTVE+G+S 
Sbjct: 181  LARNATRADLFRQEIEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSC 240

Query: 842  VDMPLKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVV 663
               P+K K A TKF+RI T+G HSIVLC+PITGRTHQIRVHLQY GHPIAND LYLS+ V
Sbjct: 241  DGSPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENV 300

Query: 662  ATRFAEGMGGQKAAMVNPVCPTSC-SPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGY 486
              R +EG+   +AA      P +C  P             EDFDIDPMCTNCPNLVPKGY
Sbjct: 301  TNRSSEGVNADRAAH----SPNNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGY 356

Query: 485  EGYEEGLWLHCVKYSGPNWEYECPLPDWAVL 393
            +G+EEGLWLHCV+YSG  W Y+CP PDWAVL
Sbjct: 357  DGHEEGLWLHCVQYSGSGWVYQCPYPDWAVL 387


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  585 bits (1507), Expect = e-164
 Identities = 280/383 (73%), Positives = 316/383 (82%), Gaps = 2/383 (0%)
 Frame = -1

Query: 1541 MKRSRDDMEN--IVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLF 1368
            MKR RD+     IVWQTPANPP RHDYIF NG+RHVRPYYFEFI HVKNRWAGKTIVDLF
Sbjct: 1    MKRRRDEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF 60

Query: 1367 AEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILV 1188
             EEFKGRPY+YYV+AV+ GRIQVDGE+VPVSYIV+SSQKISHF+HRHEPPV+  DV +L 
Sbjct: 61   TEEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQ 120

Query: 1187 KEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNA 1008
            KEPDV+T+CKPASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILAR+A
Sbjct: 121  KEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSA 180

Query: 1007 AKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPL 828
            +KAD FRQQIEAGMV+KQYIAKV GVFP++E+VV+ N+ YNAREGRSTVE+G+   + PL
Sbjct: 181  SKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPL 240

Query: 827  KSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFA 648
            K K A TKF+RIST+GTHSIVLCEPITGRTHQIRVHLQY GHPIAND LYLS+    R  
Sbjct: 241  KGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRST 300

Query: 647  EGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEG 468
            +G+   +AA  +     S SP              DF IDPMCTNCPNL PKGY+  EEG
Sbjct: 301  KGLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEG 360

Query: 467  LWLHCVKYSGPNWEYECPLPDWA 399
            LWLHC++Y GP+W YECP P+WA
Sbjct: 361  LWLHCIRYCGPDWVYECPHPEWA 383


>ref|XP_007137869.1| hypothetical protein PHAVU_009G162600g [Phaseolus vulgaris]
            gi|561010956|gb|ESW09863.1| hypothetical protein
            PHAVU_009G162600g [Phaseolus vulgaris]
          Length = 379

 Score =  578 bits (1491), Expect = e-162
 Identities = 286/386 (74%), Positives = 313/386 (81%), Gaps = 2/386 (0%)
 Frame = -1

Query: 1541 MKRSRDDME--NIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLF 1368
            MKR R+  E  +IVWQTPANPPH  DY+F NG R VRPYYFEFI HVKNRWAGKTIVDLF
Sbjct: 1    MKRKREGEEGMDIVWQTPANPPHPQDYVFRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLF 60

Query: 1367 AEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILV 1188
            AEEFKGRPYEYYVSAVKCGRIQVDGE+VPVSY+V+ SQKISHFLHRHEPPVM  DV IL 
Sbjct: 61   AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYVVRPSQKISHFLHRHEPPVMACDVLILQ 120

Query: 1187 KEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNA 1008
            KEPDV+T+CKPASVPVHPCGQYRKNTVVGILQAEH LAPLFPVHRLDRLVSGLLILAR+A
Sbjct: 121  KEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARSA 180

Query: 1007 AKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPL 828
            AKAD+FRQQIEAG+V KQYIAKV+G FPE+E +VDANI YNAREGRST E+ DS      
Sbjct: 181  AKADIFRQQIEAGLVHKQYIAKVVGEFPEDELIVDANIDYNAREGRSTAEVRDS-----A 235

Query: 827  KSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFA 648
            K K ASTKF+RIST+GT SIVLCEPITGRTHQIRVHLQY GHPIAND LY+S+    R  
Sbjct: 236  KGKAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSV 295

Query: 647  EGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEG 468
            +G+   ++A ++ V  T                 EDF IDPMCTNCPNL PKGY+G EEG
Sbjct: 296  KGLSADRSARISDVSLT--PNFDEVLNACEANSNEDFIIDPMCTNCPNLEPKGYDGNEEG 353

Query: 467  LWLHCVKYSGPNWEYECPLPDWAVLN 390
            LWLHC  YSGP W YECP PDWA L+
Sbjct: 354  LWLHCFCYSGPGWTYECPYPDWAKLS 379


>ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citrus clementina]
            gi|557539094|gb|ESR50138.1| hypothetical protein
            CICLE_v10031733mg [Citrus clementina]
          Length = 399

 Score =  577 bits (1488), Expect = e-162
 Identities = 289/381 (75%), Positives = 313/381 (82%)
 Frame = -1

Query: 1532 SRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEEFK 1353
            S ++ME IVWQTPANPP + DYIF +GRR+V+PYYFEFI HVKNRWAGKTIVDLFAEEFK
Sbjct: 27   SNNNME-IVWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFK 85

Query: 1352 GRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEPDV 1173
            GRPY+YYVSAVKCGRIQVD E+VPVSY V+SSQKISHFLHRHEPPVM  DV IL KEPDV
Sbjct: 86   GRPYDYYVSAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDV 145

Query: 1172 VTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKADL 993
            +TVCKP SVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNA+KADL
Sbjct: 146  LTVCKPPSVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNASKADL 205

Query: 992  FRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPLKSKHA 813
            FRQQIEAG V K+YIA+V GVFPE E+VVD NI YNA  GRST E GDS  D PLK K A
Sbjct: 206  FRQQIEAGKVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAA 265

Query: 812  STKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAEGMGG 633
             TKF+RIST+GTHSIVLCEPITGRTHQIRVHLQY G+PIAND LYL + V  R  EGM  
Sbjct: 266  CTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLYLCEHVTHR--EGMSA 323

Query: 632  QKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWLHC 453
             +AA  +   P   S              EDF IDP+CTNCPNL PKGYEG+EEGLWLHC
Sbjct: 324  DRAAAYSHHSPPPVS------SDKSESSSEDFSIDPICTNCPNLAPKGYEGHEEGLWLHC 377

Query: 452  VKYSGPNWEYECPLPDWAVLN 390
            V+YSGP W YECP PDWA L+
Sbjct: 378  VRYSGPGWTYECPYPDWATLS 398


>ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like [Citrus sinensis]
          Length = 405

 Score =  577 bits (1487), Expect = e-162
 Identities = 289/381 (75%), Positives = 312/381 (81%)
 Frame = -1

Query: 1532 SRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEEFK 1353
            S ++ME IVWQTPANPP + DYIF +GRR+V+PYYFEFI HVKNRWAGKTIVDLFAEEFK
Sbjct: 33   SSNNME-IVWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFK 91

Query: 1352 GRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEPDV 1173
            GRPY+YYVSAVKCGRIQVD E+VPVSY V+SSQKISHFLHRHEPPVM  DV IL KEPDV
Sbjct: 92   GRPYDYYVSAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDV 151

Query: 1172 VTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKADL 993
            +TVCKP SVPVHPCGQYRKNTVVGILQAEHD APLFPVHRLDRLVSGLLILARNA+KADL
Sbjct: 152  LTVCKPPSVPVHPCGQYRKNTVVGILQAEHDFAPLFPVHRLDRLVSGLLILARNASKADL 211

Query: 992  FRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPLKSKHA 813
            FRQQIEAG V K+YIA+V GVFPE E+VVD NI YNA  GRST E GDS  D PLK K A
Sbjct: 212  FRQQIEAGKVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAA 271

Query: 812  STKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAEGMGG 633
             TKF+RIST+GTHSIVLCEPITGRTHQIRVHLQY G+PIAND LYL + V  R  EGM  
Sbjct: 272  CTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLYLCEHVTHR--EGMSA 329

Query: 632  QKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWLHC 453
             +AA  +   P   S              EDF IDPMCTNCPNL PKGYEG+EEGLWLHC
Sbjct: 330  DRAAAYSHHSPPPVS------SDKSESSSEDFSIDPMCTNCPNLAPKGYEGHEEGLWLHC 383

Query: 452  VKYSGPNWEYECPLPDWAVLN 390
            V+YSGP W YECP PDWA L+
Sbjct: 384  VRYSGPGWTYECPYPDWATLS 404


>ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Glycine max]
          Length = 381

 Score =  575 bits (1483), Expect = e-161
 Identities = 284/386 (73%), Positives = 314/386 (81%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1541 MKRSRDD---MENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDL 1371
            MKR R+    M+NIVWQTPANPPH +DY+F NG R+VRPYYFEFI HVKNRWAGKTIVDL
Sbjct: 1    MKRKREGKEGMDNIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDL 60

Query: 1370 FAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFIL 1191
            FAEEFKGRPYEYYVSAVKCGRIQVDGE+VPVSYIV+SSQKISHFLHRHEPPVM  +V +L
Sbjct: 61   FAEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVL 120

Query: 1190 VKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARN 1011
             K+ DV+TVCKPASVPVHPCGQYRKNTVVGILQAEH L PLFPVHRLDRLVSGLLILARN
Sbjct: 121  QKDIDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARN 180

Query: 1010 AAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMP 831
            AAKAD+FRQQIEAG+V KQYIAKV G FPE+E +VDANI YNAREGRST E+  S     
Sbjct: 181  AAKADIFRQQIEAGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRGS----- 235

Query: 830  LKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRF 651
             K K ASTKF+RIST+GT SIVLCEPITGRTHQIRVHLQY GHPIAND LY+S+    R 
Sbjct: 236  AKGKAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRS 295

Query: 650  AEGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEE 471
             +G+   ++A ++ V  TS +               DF IDPMCTNCPNL PKGY+  EE
Sbjct: 296  VKGLSADRSARISGVSLTS-NFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEE 354

Query: 470  GLWLHCVKYSGPNWEYECPLPDWAVL 393
            GLWLHC++YSGP W YECP PDWA L
Sbjct: 355  GLWLHCIRYSGPGWTYECPYPDWAKL 380


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
            gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
            pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  573 bits (1478), Expect = e-161
 Identities = 281/386 (72%), Positives = 310/386 (80%)
 Frame = -1

Query: 1550 ENEMKRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDL 1371
            E E  R    M  IVWQTP NPP R DYIF NGRRHVRPYYFEFI HVKNRWAGKTIVDL
Sbjct: 8    EEESMRMGMGMGGIVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDL 67

Query: 1370 FAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFIL 1191
            FAEEFKGRPYEYYV AV+CGRIQVDGE+VPVSYIV+SSQKISHFLHRHEPPVM   V +L
Sbjct: 68   FAEEFKGRPYEYYVDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVL 127

Query: 1190 VKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARN 1011
             +E +V+TVCKPASVPVHPCGQYRKNTVVGIL+AEH LAPLFP+HRLDRLVSGLLILARN
Sbjct: 128  KEEEEVLTVCKPASVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARN 187

Query: 1010 AAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMP 831
            A+KADLFRQQIE+G+V+KQYIA+V+GVFPEEE+VVDANI YN REGRST E+ DS  D  
Sbjct: 188  ASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTR 247

Query: 830  LKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRF 651
             K K A TKF+RIS+DG HSIV CEPITGRTHQIRVHLQY G+PIAND LYL+K  + R 
Sbjct: 248  TKGKAAQTKFTRISSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRS 307

Query: 650  AEGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEE 471
             +     +AA ++  C  +                EDF IDPMCTNCPNL PKGYEG EE
Sbjct: 308  VQKTTADRAAAIS-FCSPARDVQEDCANACKENWSEDFGIDPMCTNCPNLAPKGYEGEEE 366

Query: 470  GLWLHCVKYSGPNWEYECPLPDWAVL 393
            GLWLHCV+YSGP W YECP P+WA L
Sbjct: 367  GLWLHCVQYSGPGWIYECPYPEWASL 392


>ref|XP_004235304.1| PREDICTED: RNA pseudourine synthase 7-like [Solanum lycopersicum]
          Length = 383

 Score =  572 bits (1475), Expect = e-160
 Identities = 285/387 (73%), Positives = 322/387 (83%), Gaps = 4/387 (1%)
 Frame = -1

Query: 1538 KRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEE 1359
            KR R+DME IVWQTPANPP RHDYIF NG R+V+PYYFEFI HVKNRWAGKTIVDLF++E
Sbjct: 4    KRKREDME-IVWQTPANPPERHDYIFRNGVRYVKPYYFEFISHVKNRWAGKTIVDLFSDE 62

Query: 1358 FKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEP 1179
            FKGRP +YY SAVK GRIQVDG  V VSY+VQSSQKISHFLHRHEPPVM  DV IL +EP
Sbjct: 63   FKGRPRDYYESAVKSGRIQVDGRKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCEEP 122

Query: 1178 DVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKA 999
            DV+TVCKPASVPVHPCGQYRKNTVVGILQAE+ LAPLFPVHRLDRLVSGLLILAR+A++A
Sbjct: 123  DVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSASRA 182

Query: 998  DLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVD--MPLK 825
            DLFRQQIE+G+V+K+YIA+VIGVFPE+++VV+AN+ YNAREGRSTVE+GD+  +    LK
Sbjct: 183  DLFRQQIESGVVQKRYIARVIGVFPEKQQVVNANVNYNAREGRSTVEVGDNQGNSTASLK 242

Query: 824  SKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAE 645
             K A TKF+RIST+G  SIVLCEP+TGRTHQIRVHLQY GHPIAND LY+S+ V++R AE
Sbjct: 243  GKAACTKFTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYMSEFVSSRAAE 302

Query: 644  GMGGQKAAMVNPVCPTSCSP--CXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEE 471
            G+   +AA        SCSP               EDF IDPMCTNCPNL PKGYEG EE
Sbjct: 303  GLSADRAA------AKSCSPPDPISRTSDMENDSNEDFSIDPMCTNCPNLAPKGYEGNEE 356

Query: 470  GLWLHCVKYSGPNWEYECPLPDWAVLN 390
            GLWLHCVKYSGP+W YECP PDWA L+
Sbjct: 357  GLWLHCVKYSGPDWIYECPHPDWASLS 383


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  572 bits (1474), Expect = e-160
 Identities = 274/371 (73%), Positives = 308/371 (83%)
 Frame = -1

Query: 1511 IVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEEFKGRPYEYY 1332
            IVWQTPANPP RHDYIF NG+RHVRPYYFEFI HVKNRWAGKTIVDLF EEFKGRPY+YY
Sbjct: 3    IVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDYY 62

Query: 1331 VSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEPDVVTVCKPA 1152
            V+AV+ GRIQVDGE+VPVSYIV+SSQKISHF+HRHEPPV+  DV +L KEPDV+T+CKPA
Sbjct: 63   VNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKPA 122

Query: 1151 SVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKADLFRQQIEA 972
            SVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILAR+A+KAD FRQQIEA
Sbjct: 123  SVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEA 182

Query: 971  GMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPLKSKHASTKFSRI 792
            GMV+KQYIAKV GVFP++E+VV+ N+ YNAREGRSTV  G+   + PLK K A TKF+RI
Sbjct: 183  GMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV--GNCCGNTPLKGKSACTKFTRI 240

Query: 791  STDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAEGMGGQKAAMVN 612
            ST+GTHSIVLCEPITGRTHQIRVHLQY GHPIAND LYLS+    R  +G+   +AA  +
Sbjct: 241  STNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANS 300

Query: 611  PVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWLHCVKYSGPN 432
                 S SP              DF IDPMCTNCPNL PKGY+  EEGLWLHC++Y GP+
Sbjct: 301  GCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPD 360

Query: 431  WEYECPLPDWA 399
            W YECP P+WA
Sbjct: 361  WVYECPHPEWA 371


>ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [Fragaria vesca subsp.
            vesca]
          Length = 383

 Score =  572 bits (1473), Expect = e-160
 Identities = 281/383 (73%), Positives = 312/383 (81%)
 Frame = -1

Query: 1538 KRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEE 1359
            K    DME IVWQ+PANPP R DYIF NGRRHVRPYYFEFI HVKNRWAGKTIVDLF +E
Sbjct: 4    KIEETDME-IVWQSPANPPERKDYIFRNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFTDE 62

Query: 1358 FKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEP 1179
            FKGR  +YY+SAVKCGRIQVDG++VPVS+IV+ SQKISHFLHRHEPPVM  DV IL  EP
Sbjct: 63   FKGRNRDYYISAVKCGRIQVDGQLVPVSFIVKPSQKISHFLHRHEPPVMTWDVKILQTEP 122

Query: 1178 DVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKA 999
            DVVT+CKPASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILAR+AA+A
Sbjct: 123  DVVTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSAAQA 182

Query: 998  DLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPLKSK 819
            D+FRQQIE GMV KQYIA+VIG FPEEE+VVDANI +NAREGRS+ E+GDS  D P K K
Sbjct: 183  DIFRQQIEGGMVHKQYIARVIGEFPEEEQVVDANIDHNAREGRSSAEVGDSCSDAPTKGK 242

Query: 818  HASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAEGM 639
             A TKF+RIS++G  SIVLCEP+TGRTHQIRVHLQ+ GHPIAND LYLSK V+ R AEGM
Sbjct: 243  TACTKFTRISSNGIQSIVLCEPVTGRTHQIRVHLQHAGHPIANDMLYLSKHVSDRSAEGM 302

Query: 638  GGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWL 459
            G  +AA  +   P S                EDF IDPMCTNCP+L PKGY+ +EE LWL
Sbjct: 303  GADRAAANSDHSPASV--VGKIKSTSHEDSSEDFSIDPMCTNCPSLAPKGYDYHEEALWL 360

Query: 458  HCVKYSGPNWEYECPLPDWAVLN 390
            HC +YSGP W YECP PDWA L+
Sbjct: 361  HCFRYSGPGWVYECPHPDWASLS 383


>ref|XP_006347631.1| PREDICTED: RNA pseudouridine synthase 7-like [Solanum tuberosum]
          Length = 385

 Score =  571 bits (1472), Expect = e-160
 Identities = 284/386 (73%), Positives = 320/386 (82%), Gaps = 4/386 (1%)
 Frame = -1

Query: 1538 KRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEE 1359
            KR R+DME IVWQTPANPP RHDYIF NG R+V+PYYFEFI HVKNRWAGKTIVDLF++E
Sbjct: 6    KRKREDME-IVWQTPANPPERHDYIFRNGIRYVKPYYFEFISHVKNRWAGKTIVDLFSDE 64

Query: 1358 FKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEP 1179
            FKGRP +YY SAVK GRIQVDG+ V VSY+VQSSQKISHFLHRHEPPVM  DV IL +EP
Sbjct: 65   FKGRPRDYYESAVKSGRIQVDGQKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCEEP 124

Query: 1178 DVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKA 999
            DV+TVCKPASVPVHPCGQYRKNTVVGILQAE+ LAPLFPVHRLDRLVSGLLILAR+A++A
Sbjct: 125  DVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSASRA 184

Query: 998  DLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDS--FVDMPLK 825
            DLFRQQIE+G V+K+YIA+VIGVFP++++VV+AN+ YNAREGRSTVE+GD+       LK
Sbjct: 185  DLFRQQIESGAVQKRYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDNQGSSTASLK 244

Query: 824  SKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAE 645
             K A TKF+RIST+G  SIVLCEP+TGRTHQIRVHLQY GHPIAND LYLS+ V++R A+
Sbjct: 245  GKAACTKFTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSEFVSSRSAQ 304

Query: 644  GMGGQKAAMVNPVCPTSCSP--CXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEE 471
            G+   +AA        SCSP               EDF IDPMCTNCPNL PKGYEG EE
Sbjct: 305  GLSADRAA------AKSCSPPDLISRTSDMANDSNEDFSIDPMCTNCPNLAPKGYEGNEE 358

Query: 470  GLWLHCVKYSGPNWEYECPLPDWAVL 393
            GLWLHCVKYSGP+W YECP PDWA L
Sbjct: 359  GLWLHCVKYSGPDWIYECPHPDWASL 384


>ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [Cicer arietinum]
          Length = 380

 Score =  568 bits (1465), Expect = e-159
 Identities = 279/385 (72%), Positives = 308/385 (80%), Gaps = 2/385 (0%)
 Frame = -1

Query: 1541 MKRSRDDME--NIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLF 1368
            MKR R++ E  +IVWQTPANPP   DYIF NG R+VRPYYFEFI HVKNRWAGKTIVDLF
Sbjct: 2    MKRKREEKECMDIVWQTPANPPLPQDYIFRNGTRYVRPYYFEFIAHVKNRWAGKTIVDLF 61

Query: 1367 AEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILV 1188
            AEEFKGRPYEYYVSAVKCGRIQVDGE+VPVSY+V+SSQKISHFLHRHEPPVM  DV IL 
Sbjct: 62   AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYLVKSSQKISHFLHRHEPPVMACDVPILH 121

Query: 1187 KEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNA 1008
            KEPDV+T+CKPASVPVHPCGQYRKNTVVGILQAEH LAPLFPVHRLDRLVSGLLILARN 
Sbjct: 122  KEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARNG 181

Query: 1007 AKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPL 828
             KAD+FRQQIEAG+V+KQYIAKV+G FP++E +VDANI YN REGRST E+ DS      
Sbjct: 182  TKADIFRQQIEAGLVKKQYIAKVVGEFPKDELIVDANIDYNPREGRSTAEVRDS-----A 236

Query: 827  KSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFA 648
            K K ASTKF+RI ++GTHSIV CEP+TGRTHQIRVHLQY GHPIAND LY+S+    R  
Sbjct: 237  KGKVASTKFTRIISNGTHSIVSCEPVTGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSI 296

Query: 647  EGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEG 468
             G    ++A +     TS +               DF  DPMCTNCPNL PKGY+G EEG
Sbjct: 297  NGSTADRSARIADASLTS-NFSEEVPNDCQENSNGDFGFDPMCTNCPNLAPKGYDGNEEG 355

Query: 467  LWLHCVKYSGPNWEYECPLPDWAVL 393
            LWLHC +YSGP W YECP PDWA L
Sbjct: 356  LWLHCFRYSGPGWTYECPYPDWAKL 380


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
            gi|355491829|gb|AES73032.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 380

 Score =  566 bits (1458), Expect = e-158
 Identities = 282/385 (73%), Positives = 311/385 (80%), Gaps = 2/385 (0%)
 Frame = -1

Query: 1541 MKRSRDDME--NIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLF 1368
            MKR R++ E  +IVWQTPANPP   DYI  NG R VRPYYFEFI HVKNRWAGKTIVDLF
Sbjct: 2    MKRKREEKECMDIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLF 61

Query: 1367 AEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILV 1188
            AEEFKGRPYEYYVSAVKCGRIQVDGE+VPVSY+V+SSQKISHFLHRHEPPVM  DV IL 
Sbjct: 62   AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILH 121

Query: 1187 KEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNA 1008
            KEPDV+TVCKPASVPVHPCGQYRKNTVVGILQAEH LAPLFPVHRLDRLVSGLLI+ARNA
Sbjct: 122  KEPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNA 181

Query: 1007 AKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPL 828
             KAD FRQ+IEAG+V+KQYIAKV+G FPE+E +VDANI YNAREGRST E+ DS      
Sbjct: 182  TKADSFRQEIEAGLVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTAEVRDS-----T 236

Query: 827  KSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFA 648
            K K ASTKF+RIS++GTHSIVLCEP+TGRTHQIRVHLQ  GHPIAND LY+S+    R  
Sbjct: 237  KGKVASTKFTRISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISEQTVDRSI 296

Query: 647  EGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEG 468
             G    ++A ++    TS +              EDF IDPMCTNCPNL PKGY+  EEG
Sbjct: 297  NGSTADRSACISDASLTS-NFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKGYDTDEEG 355

Query: 467  LWLHCVKYSGPNWEYECPLPDWAVL 393
            LWLHC++YSGP W YECP PDWA L
Sbjct: 356  LWLHCMRYSGPGWTYECPYPDWAKL 380


>gb|EYU43033.1| hypothetical protein MIMGU_mgv1a022495mg [Mimulus guttatus]
          Length = 375

 Score =  551 bits (1420), Expect = e-154
 Identities = 274/387 (70%), Positives = 310/387 (80%), Gaps = 3/387 (0%)
 Frame = -1

Query: 1541 MKRSRDDMEN---IVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDL 1371
            MKR R++      IVWQTPANPP R DYIF +G R+V+PYYFEFI H KNRWAGKTIVDL
Sbjct: 1    MKRKRNEAGETMEIVWQTPANPPQRQDYIFRDGIRYVKPYYFEFISHAKNRWAGKTIVDL 60

Query: 1370 FAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFIL 1191
            FA+EFKGRP +YYVSAVK GRIQVDG++VPVSYIV+SSQKISHFLHRHEPPVM  DV IL
Sbjct: 61   FADEFKGRPRDYYVSAVKSGRIQVDGQIVPVSYIVRSSQKISHFLHRHEPPVMAMDVQIL 120

Query: 1190 VKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARN 1011
              EPDV+TV KPASVPVHPCGQYRKNTVVGIL+AEHDLAP+FP+HRLDRLVSGLLILAR+
Sbjct: 121  HTEPDVLTVYKPASVPVHPCGQYRKNTVVGILEAEHDLAPIFPIHRLDRLVSGLLILARS 180

Query: 1010 AAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMP 831
            A+KAD+FRQQIE+G ++KQYIAKV+GVFPE E+V + NI YNAREG+STVEI +      
Sbjct: 181  ASKADIFRQQIESGEIKKQYIAKVVGVFPENEQVANVNINYNAREGKSTVEIENG----- 235

Query: 830  LKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRF 651
             K K A TKF+RIST+GT SIVLCEPITGRTHQIRVHLQ+ GHPIAND LYLS+ V  R 
Sbjct: 236  SKGKVACTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQFLGHPIANDLLYLSECVPNRS 295

Query: 650  AEGMGGQKAAMVNPVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEE 471
             EG    +AA  N       S              EDFDIDPMCTNCP+L PKGY+G EE
Sbjct: 296  IEGFSADRAAAAN-------SGLHIKPDNSTDDSAEDFDIDPMCTNCPDLSPKGYDGREE 348

Query: 470  GLWLHCVKYSGPNWEYECPLPDWAVLN 390
            GLWLHCV+YSGP+W YECP P+WA L+
Sbjct: 349  GLWLHCVRYSGPDWTYECPYPNWASLS 375


>ref|XP_007038074.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508775319|gb|EOY22575.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 396

 Score =  551 bits (1420), Expect = e-154
 Identities = 269/388 (69%), Positives = 309/388 (79%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1550 ENEMKRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDL 1371
            E E ++++  M+ IVWQTPA+P H+ DYIF NG+R+VRPYYFEF+ HV  RW GKTIVDL
Sbjct: 14   EKEEEKNKRKMD-IVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHVNKRWEGKTIVDL 72

Query: 1370 FAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFIL 1191
            F +EF+GRP +YYVSAVKCGRIQVDGE +PVSY V+  QKISHF+HRHEPPVM  DV IL
Sbjct: 73   FTQEFRGRPNDYYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRHEPPVMAWDVAIL 132

Query: 1190 VKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARN 1011
              EPDV+TVCKPASVPVHPCGQYRKNTV+GILQAEH L+PL+P+HRLDRLVSGLLI+A+N
Sbjct: 133  QNEPDVLTVCKPASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLDRLVSGLLIVAKN 192

Query: 1010 AAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMP 831
             AKAD+FRQ IEAG+V+KQY+AKVIGVFPE E+VVDAN+ YNAREGRST E+G S  D  
Sbjct: 193  PAKADIFRQHIEAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRSTAEVGISNGDTT 252

Query: 830  LKSKHASTKFSRISTDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRF 651
            LK K A TKF+RIST+G HSIVLCEP TGRTHQIRVHLQ  GHPIAND LYLS  V  R 
Sbjct: 253  LKGKVACTKFTRISTNGIHSIVLCEPTTGRTHQIRVHLQCTGHPIANDMLYLSDNVVDRS 312

Query: 650  AEGMGGQKAAMVNPVCP-TSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYE 474
              GM   +AA ++  CP TSC               EDF IDPMC++CPNL P GY G+E
Sbjct: 313  TLGMTADRAAALSCSCPVTSCE----NHNEEYKVSSEDFSIDPMCSHCPNLAPNGYNGHE 368

Query: 473  EGLWLHCVKYSGPNWEYECPLPDWAVLN 390
            EGLWLHCV+YSGP W YECP PDWA L+
Sbjct: 369  EGLWLHCVRYSGPGWVYECPYPDWASLS 396


>ref|XP_007038073.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508775318|gb|EOY22574.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 426

 Score =  535 bits (1379), Expect = e-149
 Identities = 269/418 (64%), Positives = 309/418 (73%), Gaps = 31/418 (7%)
 Frame = -1

Query: 1550 ENEMKRSRDDMENIVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDL 1371
            E E ++++  M+ IVWQTPA+P H+ DYIF NG+R+VRPYYFEF+ HV  RW GKTIVDL
Sbjct: 14   EKEEEKNKRKMD-IVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHVNKRWEGKTIVDL 72

Query: 1370 FAEEFKGRPYEYYVSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFIL 1191
            F +EF+GRP +YYVSAVKCGRIQVDGE +PVSY V+  QKISHF+HRHEPPVM  DV IL
Sbjct: 73   FTQEFRGRPNDYYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRHEPPVMAWDVAIL 132

Query: 1190 VKEPDVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARN 1011
              EPDV+TVCKPASVPVHPCGQYRKNTV+GILQAEH L+PL+P+HRLDRLVSGLLI+A+N
Sbjct: 133  QNEPDVLTVCKPASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLDRLVSGLLIVAKN 192

Query: 1010 AAKADLFRQQIEAGMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVE--------- 858
             AKAD+FRQ IEAG+V+KQY+AKVIGVFPE E+VVDAN+ YNAREGRST E         
Sbjct: 193  PAKADIFRQHIEAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRSTAEKRKTRRKMR 252

Query: 857  ---------------------IGDSFVDMPLKSKHASTKFSRISTDGTHSIVLCEPITGR 741
                                 +G S  D  LK K A TKF+RIST+G HSIVLCEP TGR
Sbjct: 253  SVVVIHKSLLCLLCRDFSFSKVGISNGDTTLKGKVACTKFTRISTNGIHSIVLCEPTTGR 312

Query: 740  THQIRVHLQYEGHPIANDELYLSKVVATRFAEGMGGQKAAMVNPVCP-TSCSPCXXXXXX 564
            THQIRVHLQ  GHPIAND LYLS  V  R   GM   +AA ++  CP TSC         
Sbjct: 313  THQIRVHLQCTGHPIANDMLYLSDNVVDRSTLGMTADRAAALSCSCPVTSCE----NHNE 368

Query: 563  XXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWLHCVKYSGPNWEYECPLPDWAVLN 390
                  EDF IDPMC++CPNL P GY G+EEGLWLHCV+YSGP W YECP PDWA L+
Sbjct: 369  EYKVSSEDFSIDPMCSHCPNLAPNGYNGHEEGLWLHCVRYSGPGWVYECPYPDWASLS 426


>ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [Brachypodium distachyon]
          Length = 384

 Score =  528 bits (1360), Expect = e-147
 Identities = 255/374 (68%), Positives = 292/374 (78%)
 Frame = -1

Query: 1511 IVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEEFKGRPYEYY 1332
            IVWQTPANPP   DYIF NGRR+VRPYYFEFI HVKNRWAGKTIVDLF EEFKGRPYEYY
Sbjct: 10   IVWQTPANPPEAQDYIFRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYEYY 69

Query: 1331 VSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEPDVVTVCKPA 1152
            V AVKCGR+QVD + VP  YIV+SSQKISHFLHRHEPPV+  ++ IL  E DVVTVCKPA
Sbjct: 70   VHAVKCGRLQVDEQTVPADYIVKSSQKISHFLHRHEPPVLGGNILILQNEVDVVTVCKPA 129

Query: 1151 SVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKADLFRQQIEA 972
            SVPVHPCGQYRKNTVVGILQAEH L PLFPVHRLDRLVSGLLI A++A +A+ FRQQIEA
Sbjct: 130  SVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKSADRAECFRQQIEA 189

Query: 971  GMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPLKSKHASTKFSRI 792
             +++K+Y+AKV+GVFP+ E+ VDAN+ +NAREGRSTVE+ D         K A TKF RI
Sbjct: 190  NLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEVCDGPGKALPSGKQACTKFQRI 249

Query: 791  STDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAEGMGGQKAAMVN 612
             TDG HSIVLC+P+TGRTHQIRVHL++ G+PIANDELYLS     R ++G G  +A    
Sbjct: 250  FTDGNHSIVLCKPVTGRTHQIRVHLKHIGYPIANDELYLSGNFCPRSSKGTGINRA---- 305

Query: 611  PVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWLHCVKYSGPN 432
                TS +              E+F IDPMCTNCPNL P GY+G EE LWLHCV+Y+GP+
Sbjct: 306  ----TSLACSLSSPDPDSSAEAEEFGIDPMCTNCPNLAPVGYDGDEEALWLHCVRYTGPD 361

Query: 431  WEYECPLPDWAVLN 390
            W YECP PDWA L+
Sbjct: 362  WSYECPYPDWASLD 375


>ref|NP_001136977.1| uncharacterized protein LOC100217137 [Zea mays]
            gi|194697832|gb|ACF83000.1| unknown [Zea mays]
            gi|413937019|gb|AFW71570.1| hypothetical protein
            ZEAMMB73_885155 [Zea mays]
          Length = 386

 Score =  528 bits (1360), Expect = e-147
 Identities = 252/373 (67%), Positives = 289/373 (77%)
 Frame = -1

Query: 1511 IVWQTPANPPHRHDYIFGNGRRHVRPYYFEFICHVKNRWAGKTIVDLFAEEFKGRPYEYY 1332
            IVWQTPANPP  HDYI  NGRR+VRPYYFEFI HVKNRWAGKTIVDLF +EFKGR  +YY
Sbjct: 10   IVWQTPANPPESHDYIIRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRSRDYY 69

Query: 1331 VSAVKCGRIQVDGEVVPVSYIVQSSQKISHFLHRHEPPVMESDVFILVKEPDVVTVCKPA 1152
            V AVKCGR+QVDG++V   YIV+SSQKISHFLHRHEPPV+  D+ IL  E DVVT+CKPA
Sbjct: 70   VHAVKCGRLQVDGQMVHTDYIVKSSQKISHFLHRHEPPVLAGDISILKNEVDVVTICKPA 129

Query: 1151 SVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNAAKADLFRQQIEA 972
            SVPVHPCGQYRKNTVVGILQAEH L PLFPVHRLDRLVSGLLI A+NA +A+ FRQQIEA
Sbjct: 130  SVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKNADRAECFRQQIEA 189

Query: 971  GMVRKQYIAKVIGVFPEEEKVVDANIIYNAREGRSTVEIGDSFVDMPLKSKHASTKFSRI 792
            G+++K+Y+AKV+GVFP+ E+ VDAN+ +NAREGRSTVEI     + P   K A T+F RI
Sbjct: 190  GLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEISGGAGEEP-NGKQALTRFQRI 248

Query: 791  STDGTHSIVLCEPITGRTHQIRVHLQYEGHPIANDELYLSKVVATRFAEGMGGQKAAMVN 612
             TDGTHSIVLC+P+TGRTHQIRVHL+  G+PIANDELYLS     R  +G    K     
Sbjct: 249  CTDGTHSIVLCKPVTGRTHQIRVHLKQAGYPIANDELYLSGNFCPRSTKGTNASK----- 303

Query: 611  PVCPTSCSPCXXXXXXXXXXXXEDFDIDPMCTNCPNLVPKGYEGYEEGLWLHCVKYSGPN 432
             + P+                  +FDIDPMCTNCPNL P GY+  EEGLWLHCV+Y+GP+
Sbjct: 304  KIAPSDPDSSAADHGSKDAGTDVEFDIDPMCTNCPNLAPVGYDRDEEGLWLHCVRYTGPD 363

Query: 431  WEYECPLPDWAVL 393
            W YECP PDWA L
Sbjct: 364  WSYECPYPDWAFL 376