BLASTX nr result
ID: Cocculus23_contig00019740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019740
(1103 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40215.3| unnamed protein product [Vitis vinifera] 93 2e-16
ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi... 93 2e-16
ref|XP_007216279.1| hypothetical protein PRUPE_ppa017414mg, part... 93 2e-16
gb|EYU28659.1| hypothetical protein MIMGU_mgv1a022202mg, partial... 92 3e-16
gb|ADE76509.1| unknown [Picea sitchensis] 92 4e-16
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi... 91 7e-16
emb|CBI32403.3| unnamed protein product [Vitis vinifera] 91 7e-16
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera] 91 7e-16
ref|XP_007203303.1| hypothetical protein PRUPE_ppa025850mg, part... 91 1e-15
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-15
ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containi... 90 1e-15
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi... 90 2e-15
ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar... 89 3e-15
ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] g... 89 3e-15
ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citr... 89 3e-15
dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens] 89 3e-15
ref|XP_003596787.1| Pentatricopeptide repeat-containing protein ... 89 3e-15
ref|XP_001780298.1| predicted protein [Physcomitrella patens] gi... 89 3e-15
ref|XP_007042438.1| Tetratricopeptide repeat (TPR)-like superfam... 89 4e-15
ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containi... 88 6e-15
>emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 93.2 bits (230), Expect = 2e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLRICGDCHTF KF+SKVT R I+IRDGNRFHHF+DG CSCGDYW
Sbjct: 609 NLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 653
>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 93.2 bits (230), Expect = 2e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLRICGDCHTF KF+SKVT R I+IRDGNRFHHF+DG CSCGDYW
Sbjct: 1014 NLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
>ref|XP_007216279.1| hypothetical protein PRUPE_ppa017414mg, partial [Prunus persica]
gi|462412429|gb|EMJ17478.1| hypothetical protein
PRUPE_ppa017414mg, partial [Prunus persica]
Length = 576
Score = 92.8 bits (229), Expect = 2e-16
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR CGDCH+F KFVS V QR I++RDGNRFHHFQDGLCSCGDYW
Sbjct: 532 NLRTCGDCHSFMKFVSSVAQRKIILRDGNRFHHFQDGLCSCGDYW 576
>gb|EYU28659.1| hypothetical protein MIMGU_mgv1a022202mg, partial [Mimulus
guttatus]
Length = 682
Score = 92.4 bits (228), Expect = 3e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKFVSKVT+R IV+RD NRFHHF+DG+CSCGDYW
Sbjct: 638 NLRVCGDCHNVTKFVSKVTEREIVVRDSNRFHHFRDGICSCGDYW 682
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 92.0 bits (227), Expect = 4e-16
Identities = 35/45 (77%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCHT TKF+SK+ +R I+IRD NRFHHF+DGLCSCGDYW
Sbjct: 202 NLRVCGDCHTATKFISKIVEREIIIRDANRFHHFKDGLCSCGDYW 246
>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 91.3 bits (225), Expect = 7e-16
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKF+S++TQR IV+RD NRFHHF+DG+CSCGDYW
Sbjct: 847 NLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 91.3 bits (225), Expect = 7e-16
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKF+S++TQR IV+RD NRFHHF+DG+CSCGDYW
Sbjct: 614 NLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 91.3 bits (225), Expect = 7e-16
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKF+S++TQR IV+RD NRFHHF+DG+CSCGDYW
Sbjct: 847 NLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
>ref|XP_007203303.1| hypothetical protein PRUPE_ppa025850mg, partial [Prunus persica]
gi|462398834|gb|EMJ04502.1| hypothetical protein
PRUPE_ppa025850mg, partial [Prunus persica]
Length = 554
Score = 90.5 bits (223), Expect = 1e-15
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCHTFTKFVS VTQR I++RD NRFHHF++G CSCGDYW
Sbjct: 510 NLRVCGDCHTFTKFVSAVTQRVIIVRDVNRFHHFREGTCSCGDYW 554
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 90.5 bits (223), Expect = 1e-15
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKF+SK+T+R I++RD NRFHHF+DG+CSCGDYW
Sbjct: 772 NLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
>ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Solanum lycopersicum]
Length = 791
Score = 90.1 bits (222), Expect = 1e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+C DCH FTKFVSKVT RN+V+RD NRFHHF+DG CSCGDYW
Sbjct: 747 NLRVCVDCHNFTKFVSKVTDRNVVVRDTNRFHHFKDGECSCGDYW 791
>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Glycine max]
gi|571544149|ref|XP_006602168.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Glycine max]
gi|571544153|ref|XP_006602169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Glycine max]
gi|571544157|ref|XP_006602170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Glycine max]
gi|571544163|ref|XP_006602171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X5 [Glycine max]
Length = 824
Score = 89.7 bits (221), Expect = 2e-15
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TK++SK+T+R I++RD NRFHHF+DG+CSCGDYW
Sbjct: 780 NLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
>ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 89.4 bits (220), Expect = 3e-15
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH+ TKF+SK+T+R I++RD NRFHHF++G+CSCGDYW
Sbjct: 779 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
>ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 89.4 bits (220), Expect = 3e-15
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH+ TKF+SK+T+R I++RD NRFHHF++G+CSCGDYW
Sbjct: 780 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
>ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citrus clementina]
gi|557549487|gb|ESR60116.1| hypothetical protein
CICLE_v10017898mg [Citrus clementina]
Length = 714
Score = 89.0 bits (219), Expect = 3e-15
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCHT TKF+SKVT R IV+RD +RFHHF+DG CSCGDYW
Sbjct: 670 NLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKDGTCSCGDYW 714
>dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 89.0 bits (219), Expect = 3e-15
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCHT TKF+SK+T+R I+ RD NRFHHF+DG+CSCGD+W
Sbjct: 942 NLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
>ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 867
Score = 89.0 bits (219), Expect = 3e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH FTK VS V QR IV+RD NRFHHF+DGLCSCGDYW
Sbjct: 823 NLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
>ref|XP_001780298.1| predicted protein [Physcomitrella patens] gi|162668246|gb|EDQ54857.1|
predicted protein [Physcomitrella patens]
Length = 986
Score = 89.0 bits (219), Expect = 3e-15
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCHT TKF+SK+T+R I+ RD NRFHHF+DG+CSCGD+W
Sbjct: 942 NLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
>ref|XP_007042438.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508706373|gb|EOX98269.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 820
Score = 88.6 bits (218), Expect = 4e-15
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKF+S++T R I++RD NRFHHF+DG+CSCGDYW
Sbjct: 776 NLRVCGDCHNATKFISQITDREIIVRDSNRFHHFKDGICSCGDYW 820
>ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Oryza brachyantha]
Length = 749
Score = 88.2 bits (217), Expect = 6e-15
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +3
Query: 3 NLRICGDCHTFTKFVSKVTQRNIVIRDGNRFHHFQDGLCSCGDYW 137
NLR+CGDCH TKF+SK+T+R I++RD NRFHHF+DG CSCGD+W
Sbjct: 705 NLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGYCSCGDFW 749