BLASTX nr result
ID: Cocculus23_contig00019596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019596
(763 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 323 5e-86
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 318 1e-84
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 317 4e-84
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 313 4e-83
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 312 7e-83
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 312 9e-83
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 311 1e-82
gb|EXB53890.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 311 2e-82
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 311 2e-82
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis... 310 4e-82
gb|EXB53891.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 309 8e-82
emb|CBI26821.3| unnamed protein product [Vitis vinifera] 308 1e-81
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 308 1e-81
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus] 306 4e-81
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza] 306 5e-81
gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 305 2e-80
ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 304 3e-80
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 303 6e-80
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 303 6e-80
ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 302 1e-79
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 323 bits (827), Expect = 5e-86
Identities = 169/255 (66%), Positives = 196/255 (76%), Gaps = 1/255 (0%)
Frame = -1
Query: 763 PSAYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQIT 587
P IE+ALEKLYH ECCYEP KW +EQY KY S + PV+SL GLVY+ +VQIT
Sbjct: 314 PVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQIT 373
Query: 586 PSRIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHT 407
P +++FC PEV VSNRVLR Y + IDNF+RV FVDEE EK+ STD+SPRTSS++E R+ T
Sbjct: 374 PCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRR-T 432
Query: 406 AIYERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 227
AIY RILSTL+NGI IGDKKF+ LAFSSSQLR+NS WMFAS+ GLTAA IR WMG FH+I
Sbjct: 433 AIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKI 492
Query: 226 RNVAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKV 47
RNVA+YAARLGQSF SS ETL+V+ R G +Y+FS+GIGKIS FARKV
Sbjct: 493 RNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKV 552
Query: 46 AKKCGIKLFTPSAFQ 2
A KCG K FTPSAFQ
Sbjct: 553 AIKCGCKGFTPSAFQ 567
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 318 bits (815), Expect = 1e-84
Identities = 163/253 (64%), Positives = 191/253 (75%), Gaps = 2/253 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHP--PVISLGDGLVYIRRVQITPS 581
YIEHALEKLY+ ECCY P WL EQY +YR SK HP P I L DGLVY+ RVQ+TP+
Sbjct: 307 YIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKE-HPKSPAICLDDGLVYVHRVQVTPT 365
Query: 580 RIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAI 401
R+YF PEV VSNRVLR+Y D IDNF+RV FVDEE +K+ STDLSPR ++ DE+ K T +
Sbjct: 366 RVYFSGPEVNVSNRVLRHYRDYIDNFLRVSFVDEEWDKMYSTDLSPRVAAGDEN-KRTKL 424
Query: 400 YERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 221
YER++S LR+G+ IGD+KFD LAFSSSQLRDNS WMFA DGL A IREWMGDF IRN
Sbjct: 425 YERVISILRDGVRIGDRKFDFLAFSSSQLRDNSLWMFAPTDGLNADGIREWMGDFSSIRN 484
Query: 220 VAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAK 41
VAKYAARLGQSF SS ETL+V+ ++G +Y FS+GIGKIS FAR+VA
Sbjct: 485 VAKYAARLGQSFGSSTETLSVS---KREIEEIQDVKNGTEYTFSDGIGKISEDFARQVAA 541
Query: 40 KCGIKLFTPSAFQ 2
KCG++ TPSAFQ
Sbjct: 542 KCGVRSSTPSAFQ 554
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 317 bits (811), Expect = 4e-84
Identities = 165/251 (65%), Positives = 192/251 (76%), Gaps = 1/251 (0%)
Frame = -1
Query: 751 IEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITPSRI 575
IEHAL+KLYH ECCYEP +WL +QY KY S+ P ISL DGLVY+ RVQ+TPSR+
Sbjct: 322 IEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRV 381
Query: 574 YFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIYE 395
YFC PE+ VSNRVLR++ IDNF+R+ F+DE+ +K+ STDLSPR SS D T IY
Sbjct: 382 YFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSAT-DITRTRIYT 440
Query: 394 RILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNVA 215
RILSTLRNGI IGD+KF+ LAFSSSQLR++SAWMFAS+ GLTAA IREWMG+F EIRNVA
Sbjct: 441 RILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVA 500
Query: 214 KYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKKC 35
KYAARLGQSFSSSKETL+V+ E KYVFS+GIGK+S FARKVA KC
Sbjct: 501 KYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKC 560
Query: 34 GIKLFTPSAFQ 2
G+K PSAFQ
Sbjct: 561 GLKDNPPSAFQ 571
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 313 bits (802), Expect = 4e-83
Identities = 159/252 (63%), Positives = 194/252 (76%), Gaps = 1/252 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFH-PPVISLGDGLVYIRRVQITPSR 578
YI+HALEKLY+ ECCYEP +WL E+Y + +S+ + P ISL +GLVY+RRVQITPSR
Sbjct: 316 YIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSR 375
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YFC PE+ VSNRVLR +H+ IDNF+R+ FVDEE EK+ ST++ R + T IY
Sbjct: 376 VYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQARG-------RRTGIY 428
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
+RILSTLRNGI IG+K+F+ LAFSSSQLR+NSAWMFAS+ GLTAA IR WMG+F +IRNV
Sbjct: 429 KRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNV 488
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSFSSS ETL+V+ +DG+KYVFS+GIGKIS FA+KVA K
Sbjct: 489 AKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAK 548
Query: 37 CGIKLFTPSAFQ 2
C +K TPSAFQ
Sbjct: 549 CRLKGCTPSAFQ 560
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 312 bits (800), Expect = 7e-83
Identities = 164/251 (65%), Positives = 192/251 (76%), Gaps = 1/251 (0%)
Frame = -1
Query: 751 IEHALEKLYHSNECCYEPVKWLDEQYTKYRQS-KHFHPPVISLGDGLVYIRRVQITPSRI 575
I +ALEKL++ EC YEP WL+EQY KY + + PP I+L GLVY+RRVQ+TPS++
Sbjct: 319 INYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPAIALDSGLVYVRRVQVTPSKV 378
Query: 574 YFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIYE 395
YFC PE+ VSNRVLR Y D ID F+RV FVDEE EKL STDLSPRTS+ +EDR+ T IY
Sbjct: 379 YFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFSTDLSPRTSNANEDRR-TGIYR 437
Query: 394 RILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNVA 215
RILS LRNGI IGD+KF+ LAFSSSQLRDNS WMFA+ DG +A IR+W+GDF IRNVA
Sbjct: 438 RILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGHSADTIRQWIGDFRSIRNVA 497
Query: 214 KYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKKC 35
KYAARLGQSF SS ETLTV+ ER +KYVFS+GIGKIS TFA++VAKKC
Sbjct: 498 KYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYVFSDGIGKISSTFAKRVAKKC 557
Query: 34 GIKLFTPSAFQ 2
G+K PSAFQ
Sbjct: 558 GLKDCVPSAFQ 568
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 312 bits (799), Expect = 9e-83
Identities = 163/254 (64%), Positives = 185/254 (72%)
Frame = -1
Query: 763 PSAYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHPPVISLGDGLVYIRRVQITP 584
P ++IEHALEKLYH ECCYEPV+WL EQY Y + P ISL GLVY+RRVQITP
Sbjct: 306 PISFIEHALEKLYHLKECCYEPVRWLSEQYRTYVKKPVAGSPAISLDTGLVYVRRVQITP 365
Query: 583 SRIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTA 404
++YFC PEV VSNRVLR Y + IDNF+RV F+DE EK+ ST +SPR S ++ + T
Sbjct: 366 CKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPRMS---KEGRRTG 422
Query: 403 IYERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIR 224
+Y RILS L+NGI IGDKKFD LAFSSSQLRDNSAWMFAS+ GLTAA IR WMGDF +IR
Sbjct: 423 VYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIR 482
Query: 223 NVAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVA 44
NVAKYAARLGQSFSSSKETL V + YVFS+GIGKIS A +VA
Sbjct: 483 NVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVA 542
Query: 43 KKCGIKLFTPSAFQ 2
KCG K TPSAFQ
Sbjct: 543 IKCGCKSSTPSAFQ 556
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 311 bits (798), Expect = 1e-82
Identities = 166/253 (65%), Positives = 193/253 (76%), Gaps = 2/253 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHP--PVISLGDGLVYIRRVQITPS 581
YI+HALEKLY+ ECC+EP KWL EQY Y SK +P PVISL DGLV +RRVQITPS
Sbjct: 316 YIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKK-NPGSPVISLDDGLVNVRRVQITPS 374
Query: 580 RIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAI 401
R+YFC PE+ VSNRVLR++HD IDNF+R+ FVDEE EK+ STDL R + T I
Sbjct: 375 RVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDLLTRN-------RITEI 427
Query: 400 YERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 221
Y RILSTL+NGI IGDK+F+ LAFSSSQLR+NSAWMFAS++GLTAA IR WMG+F +IRN
Sbjct: 428 YGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRN 487
Query: 220 VAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAK 41
VAKYAARLGQSFSSS ETL+V +RDG+ YVFS+GIGKIS FA+KVA
Sbjct: 488 VAKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAA 547
Query: 40 KCGIKLFTPSAFQ 2
KC + TPSAFQ
Sbjct: 548 KCRLNGRTPSAFQ 560
>gb|EXB53890.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 885
Score = 311 bits (797), Expect = 2e-82
Identities = 159/252 (63%), Positives = 191/252 (75%), Gaps = 1/252 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHP-PVISLGDGLVYIRRVQITPSR 578
YIE ALEKL+H +CCY P++WL +QY KY +S I+L DGLVY+ RVQ+TP++
Sbjct: 122 YIESALEKLHHLKDCCYNPLRWLKKQYIKYNRSGQIPKLRTITLDDGLVYVHRVQVTPTK 181
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YFC PE+ +SNRVLR YH+ I+NF+RV FVDE+ +KL STDLS SS++ R+ T +Y
Sbjct: 182 VYFCGPEINLSNRVLRNYHEDINNFLRVSFVDEDLDKLSSTDLSAHGSSENGKRR-TRLY 240
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
+RILSTLRNGI IGDKKF+ LAFSSSQLR+ SAWMFAS+DGLTAA IR+WMGDF I+NV
Sbjct: 241 DRILSTLRNGILIGDKKFEFLAFSSSQLREGSAWMFASRDGLTAADIRKWMGDFRCIKNV 300
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSF SS ET V ERDG Y FS+GIGKIS FAR+VAKK
Sbjct: 301 AKYAARLGQSFGSSHETFRVGRHEVELIPDIQVERDGKNYCFSDGIGKISEDFAREVAKK 360
Query: 37 CGIKLFTPSAFQ 2
CG+ FTPSAFQ
Sbjct: 361 CGLNRFTPSAFQ 372
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 311 bits (797), Expect = 2e-82
Identities = 158/252 (62%), Positives = 193/252 (76%), Gaps = 1/252 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFH-PPVISLGDGLVYIRRVQITPSR 578
YI+HALEKLY+ ECCYEP +WL E+Y + +S+ + P ISL +GLVY+RRVQITPSR
Sbjct: 316 YIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSR 375
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YFC PE+ VSNRVLR +H+ IDNF+R+ FVDEE EK+ ST++ R + T IY
Sbjct: 376 VYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQARG-------RRTGIY 428
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
+RILSTLRNGI IG+K+F+ LAFSSSQLR+NSAWMFAS+ GLTAA IR WMG+F +IRNV
Sbjct: 429 KRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNV 488
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSFSSS ETL+V+ +DG+KYVF +GIGKIS FA+KVA K
Sbjct: 489 AKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAK 548
Query: 37 CGIKLFTPSAFQ 2
C +K TPSAFQ
Sbjct: 549 CRLKGCTPSAFQ 560
>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
1b [Cucumis sativus]
Length = 1115
Score = 310 bits (794), Expect = 4e-82
Identities = 163/255 (63%), Positives = 197/255 (77%), Gaps = 2/255 (0%)
Frame = -1
Query: 760 SAYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITP 584
+A I+HAL+KL H ECCY P KWLDE+Y KY + K+ PP+++L +GLVY+ RVQ+TP
Sbjct: 314 TAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLNEGLVYVHRVQVTP 373
Query: 583 SRIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTA 404
++YFC PEV +SNRVLR Y D IDNF+RV FVDEE K+ ST+LSPR SS ED K T
Sbjct: 374 CKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSPRASSSLEDGK-TK 432
Query: 403 IYERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIR 224
I++RILS LR+GI IGDKKF+ LA+SSSQLR+N+AWMFA K+ LTAA IR+WMGDFH IR
Sbjct: 433 IFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAKIRQWMGDFHNIR 492
Query: 223 NVAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXER-DGMKYVFSEGIGKISHTFARKV 47
NVAKYAARLGQSF SS ETL+V+ E G+ YVFS+GIGKI+ +FARKV
Sbjct: 493 NVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDGIGKIAASFARKV 552
Query: 46 AKKCGIKLFTPSAFQ 2
AKKCGI+ TPSAFQ
Sbjct: 553 AKKCGIR-HTPSAFQ 566
>gb|EXB53891.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1118
Score = 309 bits (791), Expect = 8e-82
Identities = 158/255 (61%), Positives = 192/255 (75%), Gaps = 1/255 (0%)
Frame = -1
Query: 763 PSAYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHP-PVISLGDGLVYIRRVQIT 587
P YI+ AL+KLYH +CCY+P+ WL +Q+TK++ S P I+L DGLVY+ RVQ+T
Sbjct: 280 PLEYIDSALDKLYHLKDCCYDPLIWLTKQFTKHKTSGQIPKMPTIALDDGLVYVHRVQVT 339
Query: 586 PSRIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHT 407
P+++YFC PE+ +SNRVLR Y + IDNF+RV FV+E+ +KL STDLS R SS + R+ T
Sbjct: 340 PTKVYFCGPEINLSNRVLRNYPEDIDNFLRVSFVEEDLDKLFSTDLSARGSSANGKRR-T 398
Query: 406 AIYERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 227
+YERILSTLRNGI IGDKKF+ LAFSSSQLR+ S WMFAS+DGLTAA IR+WMGDF I
Sbjct: 399 RLYERILSTLRNGIIIGDKKFEFLAFSSSQLREGSTWMFASRDGLTAANIRKWMGDFRCI 458
Query: 226 RNVAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKV 47
+NVAKYAARLGQSF SS ET V ERDG Y FS+GIGKIS FA++V
Sbjct: 459 KNVAKYAARLGQSFGSSHETFRVGRHEVELIPDIQVERDGKNYCFSDGIGKISEDFAKEV 518
Query: 46 AKKCGIKLFTPSAFQ 2
AKKCG+ FTPSAFQ
Sbjct: 519 AKKCGLNRFTPSAFQ 533
>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
Length = 943
Score = 308 bits (789), Expect = 1e-81
Identities = 162/252 (64%), Positives = 184/252 (73%)
Frame = -1
Query: 757 AYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHPPVISLGDGLVYIRRVQITPSR 578
++IEHALEKLY+ ECCYEPV+WL EQY Y + P ISL GLVY+RRVQITP +
Sbjct: 273 SFIEHALEKLYYLEECCYEPVRWLHEQYRTYISKQVAGSPAISLDTGLVYVRRVQITPCK 332
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YFC PEV VSNRVLR Y + IDNF+RV F+DE EK+ ST +SPR S+ + + T +Y
Sbjct: 333 VYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPRMSN---EGRRTGVY 389
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
RILS L+NGI IGDKKFD LA SSSQLRDNSAWMFAS+ GLTAA IR MGDF +IRNV
Sbjct: 390 RRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNV 449
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSFSSSKETL V RDG YVFS+GIGKIS A +VA K
Sbjct: 450 AKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIK 509
Query: 37 CGIKLFTPSAFQ 2
CG K TPSAFQ
Sbjct: 510 CGCKNSTPSAFQ 521
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 308 bits (789), Expect = 1e-81
Identities = 162/252 (64%), Positives = 184/252 (73%)
Frame = -1
Query: 757 AYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHPPVISLGDGLVYIRRVQITPSR 578
++IEHALEKLY+ ECCYEPV+WL EQY Y + P ISL GLVY+RRVQITP +
Sbjct: 306 SFIEHALEKLYYLEECCYEPVRWLHEQYRTYISKQVAGSPAISLDTGLVYVRRVQITPCK 365
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YFC PEV VSNRVLR Y + IDNF+RV F+DE EK+ ST +SPR S+ + + T +Y
Sbjct: 366 VYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPRMSN---EGRRTGVY 422
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
RILS L+NGI IGDKKFD LA SSSQLRDNSAWMFAS+ GLTAA IR MGDF +IRNV
Sbjct: 423 RRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNV 482
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSFSSSKETL V RDG YVFS+GIGKIS A +VA K
Sbjct: 483 AKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIK 542
Query: 37 CGIKLFTPSAFQ 2
CG K TPSAFQ
Sbjct: 543 CGCKNSTPSAFQ 554
>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
Length = 1115
Score = 306 bits (785), Expect = 4e-81
Identities = 162/255 (63%), Positives = 195/255 (76%), Gaps = 2/255 (0%)
Frame = -1
Query: 760 SAYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITP 584
+A I+HAL+KL H ECCY P KWLDE+Y KY + K+ PP+++L +GLVY+ RVQ+TP
Sbjct: 314 TAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLNEGLVYVHRVQVTP 373
Query: 583 SRIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTA 404
++YFC PEV +SNRVLR Y D IDNF+RV FVDEE K+ ST+LSPR SS ED K T
Sbjct: 374 CKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSPRASSSLEDGK-TK 432
Query: 403 IYERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIR 224
I +RILS LR+GI IGDKKF+ LA+SSSQLR+N+AWMFA K+ LTAA IR+WMGDFH IR
Sbjct: 433 ILKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAKIRQWMGDFHNIR 492
Query: 223 NVAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXER-DGMKYVFSEGIGKISHTFARKV 47
NVAKYAARLGQ F SS ETL+V+ E G+ YVFS+GIGKI+ +FARKV
Sbjct: 493 NVAKYAARLGQPFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDGIGKIAASFARKV 552
Query: 46 AKKCGIKLFTPSAFQ 2
AKKCGI+ TPSAFQ
Sbjct: 553 AKKCGIR-HTPSAFQ 566
>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
Length = 1101
Score = 306 bits (784), Expect = 5e-81
Identities = 158/252 (62%), Positives = 186/252 (73%), Gaps = 1/252 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITPSR 578
YIEHAL+KLY+ ECCY+PV WL EQY KY+ + PP ISL DGLVYI RVQ+TP+R
Sbjct: 310 YIEHALDKLYYIKECCYDPVAWLREQYRKYQTFEELPKPPTISLDDGLVYIHRVQVTPTR 369
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YF PEV +SNRVLR + IDNF+RV F+DEE +K+ STDLSP+ ++ + + T +Y
Sbjct: 370 VYFAGPEVNMSNRVLRQFSAHIDNFLRVSFIDEEWDKMYSTDLSPKVATGVGNGR-TKLY 428
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
ER+LSTLRNGI IG+K+F LAFSSSQLR+NS WMFA DGLTA IR WMGDF IRNV
Sbjct: 429 ERVLSTLRNGITIGEKRFQFLAFSSSQLRENSLWMFAPVDGLTADDIRRWMGDFSSIRNV 488
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSFSSS ETL V RDG Y+FS+GIGKIS FAR+VA K
Sbjct: 489 AKYAARLGQSFSSSTETLKVAQYEVERIPDVEVVRDGTTYIFSDGIGKISSDFARRVATK 548
Query: 37 CGIKLFTPSAFQ 2
CGI+ PSAFQ
Sbjct: 549 CGIRDGVPSAFQ 560
>gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 862
Score = 305 bits (780), Expect = 2e-80
Identities = 154/255 (60%), Positives = 187/255 (73%), Gaps = 1/255 (0%)
Frame = -1
Query: 763 PSAYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHFHP-PVISLGDGLVYIRRVQIT 587
P IE AL+KLYH +CCY+P++WL +QY KY S P I+L DGLVY+ RVQ+T
Sbjct: 295 PLECIESALDKLYHLKDCCYDPLRWLKKQYIKYNTSGQIPKMPTIALEDGLVYVHRVQVT 354
Query: 586 PSRIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHT 407
P+++YFC PE+ +SNRVLR Y IDNF+RV FVDE +KL STDL R SS + R+ T
Sbjct: 355 PTKVYFCGPEINLSNRVLRNYPKDIDNFLRVSFVDENLDKLSSTDLCARGSSANGKRR-T 413
Query: 406 AIYERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 227
+Y+RIL TLRNGI IGDKKF+ LAFSSSQL++ S WMFAS+DGLTAA IR WMGDFH+I
Sbjct: 414 RLYDRILFTLRNGILIGDKKFEFLAFSSSQLKEGSLWMFASRDGLTAADIRNWMGDFHDI 473
Query: 226 RNVAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKV 47
+NVA+YAARLGQSF SS ET V +RDG Y FS+GIGKIS FA++V
Sbjct: 474 KNVARYAARLGQSFGSSHETFRVGRDEVELIPDIEVKRDGKNYCFSDGIGKISEDFAKEV 533
Query: 46 AKKCGIKLFTPSAFQ 2
AKKCG+ +TPSAFQ
Sbjct: 534 AKKCGLNRYTPSAFQ 548
>ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Citrus
sinensis]
Length = 633
Score = 304 bits (778), Expect = 3e-80
Identities = 156/251 (62%), Positives = 190/251 (75%), Gaps = 1/251 (0%)
Frame = -1
Query: 751 IEHALEKLYHSNECCYEPVKWLDEQYTKYRQS-KHFHPPVISLGDGLVYIRRVQITPSRI 575
IEHALE L+H ECCYEPV WL EQY KY S + + P ++L DGLVY+ +V +TPS++
Sbjct: 150 IEHALETLFHLRECCYEPVSWLAEQYRKYVLSGRLLNSPAVALDDGLVYVNKVLVTPSKV 209
Query: 574 YFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIYE 395
YFC PE+ +SNRVLR Y D IDNF+R+ FVDE+ +KL ST LSP TSS +E+R HT IYE
Sbjct: 210 YFCGPEISLSNRVLRSYPDEIDNFLRLSFVDEDLDKLYSTVLSPVTSSTNEER-HTRIYE 268
Query: 394 RILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNVA 215
R+LSTLRNGI IGDKKF+ LAFS+SQ++DNS WMFAS+ LTAA IRE MGDF +I+NVA
Sbjct: 269 RVLSTLRNGIVIGDKKFETLAFSNSQVKDNSLWMFASRPELTAADIRERMGDFRDIKNVA 328
Query: 214 KYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKKC 35
KYAARLGQSFSSS+E L V+ E+DG+ Y FS+GIGKIS A VAK C
Sbjct: 329 KYAARLGQSFSSSREALHVHSSDIEIIPDVEVEKDGITYCFSDGIGKISSELAEIVAKNC 388
Query: 34 GIKLFTPSAFQ 2
G ++TPSA+Q
Sbjct: 389 GFTIYTPSAYQ 399
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 303 bits (775), Expect = 6e-80
Identities = 159/253 (62%), Positives = 186/253 (73%), Gaps = 1/253 (0%)
Frame = -1
Query: 757 AYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITPS 581
A IEHALEKLY+ ECCY+PV+WL EQY +Y + + P I+L DGLVY+RRV +TP
Sbjct: 307 ACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGLVYVRRVLVTPC 366
Query: 580 RIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAI 401
++YFC PEV VSNRVLR Y + IDNF+RV FVDEE EK+ STDL PR S+ + R T I
Sbjct: 367 KVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRASTGNGVR--TDI 424
Query: 400 YERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 221
Y RILSTLRNG IGDKKF+ LAFSSSQLRDNS WMFAS+ GLTA IR WMG F +IRN
Sbjct: 425 YLRILSTLRNGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGGFQQIRN 484
Query: 220 VAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAK 41
VAKYAARLGQSF SS+ETL+V G Y+FS+GIGKIS FAR+VA
Sbjct: 485 VAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISADFARRVAV 544
Query: 40 KCGIKLFTPSAFQ 2
KCG++ +TPS FQ
Sbjct: 545 KCGLQ-YTPSCFQ 556
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 303 bits (775), Expect = 6e-80
Identities = 157/253 (62%), Positives = 187/253 (73%), Gaps = 1/253 (0%)
Frame = -1
Query: 757 AYIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITPS 581
A IEHALEKLY+ ECCY+PV+WL EQY +Y + + P I+L DGLVY+RRV +TP
Sbjct: 306 ACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGLVYVRRVVVTPC 365
Query: 580 RIYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAI 401
++YFC PEV VSNRVLR Y + I+NF+RV FVDEE EK+ STDL PR S+ + R T I
Sbjct: 366 KVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRASTGNGTR--TDI 423
Query: 400 YERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 221
YERILSTLRNG IGDK+F+ LAFSSSQLRDNS WMFAS+ GLTA IR WMGDF +IRN
Sbjct: 424 YERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFRQIRN 483
Query: 220 VAKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAK 41
VAKYAARLGQSF SS+ETL+V G Y+FS+GIGKIS FA +V
Sbjct: 484 VAKYAARLGQSFGSSRETLSVGRHEVEVIPDVACSLHGTNYIFSDGIGKISADFAHRVTI 543
Query: 40 KCGIKLFTPSAFQ 2
KCG++ +TPS+FQ
Sbjct: 544 KCGLQ-YTPSSFQ 555
>ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1082
Score = 302 bits (773), Expect = 1e-79
Identities = 154/252 (61%), Positives = 189/252 (75%), Gaps = 1/252 (0%)
Frame = -1
Query: 754 YIEHALEKLYHSNECCYEPVKWLDEQYTKYRQSKHF-HPPVISLGDGLVYIRRVQITPSR 578
YIEHALE L+H ECCYEPV+WL+EQY KY S+ F P ++L DGL+Y+ +V +TPS+
Sbjct: 290 YIEHALETLFHLRECCYEPVRWLEEQYRKYVLSRRFLTSPAVALDDGLIYVNKVLVTPSK 349
Query: 577 IYFCRPEVIVSNRVLRYYHDAIDNFIRVCFVDEEGEKLRSTDLSPRTSSKDEDRKHTAIY 398
+YF PE+ +SNRV+R Y D IDNF+R+ FVDE+ +KL ST LSP SS +E+R HT IY
Sbjct: 350 VYFSGPEISLSNRVVRSYPDEIDNFLRLSFVDEDLDKLYSTVLSPLISSTNEER-HTTIY 408
Query: 397 ERILSTLRNGIAIGDKKFDLLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 218
ER+LSTLRNGI IGDKKF+ LAFS+SQ++DNS WMFAS+ LTAA IRE MGDF +I+NV
Sbjct: 409 ERVLSTLRNGIVIGDKKFETLAFSNSQVKDNSMWMFASRPELTAADIRESMGDFRDIKNV 468
Query: 217 AKYAARLGQSFSSSKETLTVNWXXXXXXXXXXXERDGMKYVFSEGIGKISHTFARKVAKK 38
AKYAARLGQSF SS+E L V+ E DG+ Y FS+GIGKIS A VAK
Sbjct: 469 AKYAARLGQSFGSSREALHVDSSDIEIIPDVEVEDDGITYCFSDGIGKISAELAEIVAKN 528
Query: 37 CGIKLFTPSAFQ 2
CG ++TPSAFQ
Sbjct: 529 CGFTIYTPSAFQ 540